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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:150739..153729+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040314 ID=XLOC_040314|Name=XLOC_040314|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2991bp|location=Sequence derived from alignment at sc0000019_pilon:150739..153729+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCAAGCGCAAGACGAAAATCGATGTAACATAGATCTATTGAATCA
TTTCTGGTGTATGGTGACGTCACTCTATTTGATTATGCTGGGTGGTGTTC
GAAGTATCAAACCTCTCTCACTTTTCGATACGAAGGTAAGAGATTCATCA
AATAATTTCATACGTATCtagccttcggatgctcttaacttttttagttt
taagcctaaaaatattctcgacatgttcttattttcaccattttgtgagc
attttttaccattttcctaggaaatcaggtgttttagaatcCGCAAAGCA
TTAAAATAATCTTTAATTTTGCTAAATACTTtgcccatcgaagccttatg
ttcttatatagttttttcttataaaaaaggattCTTTTAGTCAAATACAT
CggagtctccttaactcgaaccacTATTACTCGAATTTTTCCTTAActct
aactcgaacaaatttgctgGTCCCTCCACTTCACAAACACctataaaagg
aaaaaatcaaaatataatagccgcattatttttcatcattcAACACAAAC
TCCTATAAATAAACAAGTATAActataacttgaaatttccttgATAATCT
TATCGGATCATATGACTTTCCGTGGCTAAAAGTTTTTACTCTAACagcta
attttcttttttcttattacAGGGGAAACATGCATTTACTTTCGCTTTGT
ATTCATCACCAGTCCTTTCTAATGAGGTTGATgacaaaatcaacaaatat
CGAAGAGAGGTAACACATCTTTAAAACATTGCTCTCGtgtaaagtttttg
ttttatatataagaacatccaaaaattttgaagccttttggtgttcttaa
tttttcgagtttaaGCCTTATTCGTACTAGGGCTGGCGGCTTTTTCTGTt
cggggaaatttttttgagaagttTGGCGTTTAGGAGTCCACAAGGTCTGA
GAAGGTTCTTTAAGCTATGGTTCTCAAAGTTGTGGGTTCAGTTTAACTTT
CATGCACTTTTCTGATCCGTTCTAGTTTTGTTTGAATGCAATCCAGTGCA
TCATCAAACAACATATCGATCTGACTTTCCAAGATGAACGAGCACGAAAT
AACACGTTAGACCTCTTGCATACCATATCTACCATATTTTCACTGACGTC
AGCATTTCATTTGAGTTGCGAAGATGCTCGACAATTCGCGGCCTGTGAAT
TGTATAGAGTTGGTTTGGATCTAGCGGCTCAAGAGGTGAGtggatttttc
ttttcactAAAAAAGTTTAAACCGATTAAGAACGGAATAGTTTAATAGGG
ATCCGAGACATCCCGGGATGAGCGTTACAGTcaaccctctctaattcgaa
cgtcTACTATTCCAActtttctattattcaaattaaaatattggtcccct
cagctagaaagTCGTATAAAAGAGtctctgtaatttgaatatttctctaa
ttcgaagaaaattcttggtcccttgaagatcgaattagagagagtaaaCT
GTACCTCAAACTTCAAGTACTGCTGAAGTAGATTTATCGACATATTCTCC
CTATTCCAACTTATATTTGGTCTcccattttctttatattaAGTTGGAAG
AAAATATCGACAAGCATCTTAACGTTTTTAGCTAATATTTACCAACGTTT
AGATTCTGTAgaaaaacttgaccacaaaaatccaaatgaacttgaaaaat
tctcacttgaaaaattaccaaaacgttaaaatggaatggaaaatCTACAA
AGGAACGGATATACCTACTGTATACCGCACTGTATACCGTACTGTATACC
GTACTTATGGCTATCTTTCCAAAAGCTGAACAttcaaatgatgaaaaaat
ttcctGTGTAAATGAACATTTCTAAGACGAGACGAACTAAGCTAGCCACC
CTACAAAAGAGTTATTTTCACGTTTGTTTTTTCCTTATTTCAAACGTTTG
AATGTTAAAGcgaacttttaaaaatatagcCATAATCTTATATAAACGTT
AACAAGTTTTCGATTCTCATTAAAATCATCTCCATGACATCATTCAAAGG
TTTCCATGGTGATCGAAGACAAACTAACCTTCTCAACACGAATGATCGAC
GTTGTTGGTGGACGAATCGCTAAAACCTTACTATCTGGTGAAACCCAACA
TCTTTCGGACTCCTTAAGTAAATTACCCACAAATATTTCATCATGGCTGG
CTAAACTGGtatgtttttataatttttgttaaattttggcAGATATTGGA
AAGATAGATGAAATGAACCAGACAGGTAAAGTagatatatatatagtatg
aaaatataaatgttttctcctgtcagacctacaaacaacaaagagtggcc
gaattctttttcctcttagagagacgatgttacaatgaaaTAGTTTATAC
TTAAAAGGATAAAACTGGTTCGTGATATGTTGCCTGTAGATTTGTTCAGG
GTTTCTCAGCTAAACCTCCAAATCTTTTTGTCTAGCTTTTTTCCAGAGTC
GAGATATCAGAGTTCTTGACTTTTAgcaagaaaacaatgaaattttgaCG
TAAGAACCCGTGTAACCCTATTGACCTTGGAAAAGAGTTAGACAAACGGA
TTTGGAGGTTCAGCTCAGGACTATGAAAGAtcgaaaaatctcaaatcatt
TAATTATGTCTTAAAGATGATACAGAGAGACAGCCagagatttttttaag
aattgaCGTAGAATTGCCAATCTTAATATGTTAATACAAAGATCTAAAAC
CTCATCAAAAACTACCTTAACATGAAAACCTATTTTGGTGTTAAGTTAAT
CATCTTTCTAatattattctttttttctttctttttttttacaggaGaaa
aaaaCGAGCAATGTTGCGGAGCTACCCATATCGAAGACCTACTTGCTTTT
ACAATATTTGAACTCACATCTTATTGAACACACAACAAAAGAAGCGAGAT
TTATCAAAGAATTGATCGAATGTCTCAAAGTGTTCGTATGA Coding sequence (CDS) from alignment at sc0000019_pilon:150739..153729+ >XLOC_040314 ID=XLOC_040314|Name=XLOC_040314|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1476bp|location=Sequence derived from alignment at sc0000019_pilon:150739..153729+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCAAGCGCAAGACGAAAATCGATGTAACATAGATCTATTGAATCA
TTTCTGGTGTATGGTGACGTCACTCTATTTGATTATGCTGGGTGGTGTTC
GAAGTATCAAACCTCTCTCACTTTTCGATACGAAGATGAAGCAAGCGCAA
GACGAAAATCGATGTAACATAGATCTATTGAATCATTTCTGGTGTATGGT
GACGTCACTCTATTTGATTATGCTGGGTGGTGTTCGAAGTATCAAACCTC
TCTCACTTTTCGATACGAAGGGGAAACATGCATTTACTTTCGCTTTGTAT
TCATCACCAGTCCTTTCTAATGAGGTTGATgacaaaatcaacaaatatCG
AAGAGAGGGGAAACATGCATTTACTTTCGCTTTGTATTCATCACCAGTCC
TTTCTAATGAGGTTGATgacaaaatcaacaaatatCGAAGAGAGTTTTGT
TTGAATGCAATCCAGTGCATCATCAAACAACATATCGATCTGACTTTCCA
AGATGAACGAGCACGAAATAACACGTTAGACCTCTTGCATACCATATCTA
CCATATTTTCACTGACGTCAGCATTTCATTTGAGTTGCGAAGATGCTCGA
CAATTCGCGGCCTGTGAATTGTATAGAGTTGGTTTGGATCTAGCGGCTCA
AGAGTTTTGTTTGAATGCAATCCAGTGCATCATCAAACAACATATCGATC
TGACTTTCCAAGATGAACGAGCACGAAATAACACGTTAGACCTCTTGCAT
ACCATATCTACCATATTTTCACTGACGTCAGCATTTCATTTGAGTTGCGA
AGATGCTCGACAATTCGCGGCCTGTGAATTGTATAGAGTTGGTTTGGATC
TAGCGGCTCAAGAGGTTTCCATGGTGATCGAAGACAAACTAACCTTCTCA
ACACGAATGATCGACGTTGTTGGTGGACGAATCGCTAAAACCTTACTATC
TGGTGAAACCCAACATCTTTCGGACTCCTTAAGTAAATTACCCACAAATA
TTTCATCATGGCTGGCTAAACTGGTTTCCATGGTGATCGAAGACAAACTA
ACCTTCTCAACACGAATGATCGACGTTGTTGGTGGACGAATCGCTAAAAC
CTTACTATCTGGTGAAACCCAACATCTTTCGGACTCCTTAAGTAAATTAC
CCACAAATATTTCATCATGGCTGGCTAAACTGgaGaaaaaaaCGAGCAAT
GTTGCGGAGCTACCCATATCGAAGACCTACTTGCTTTTACAATATTTGAA
CTCACATCTTATTGAACACACAACAAAAGAAGCGAGATTTATCAAAGAAT
TGATCGAATGTCTCAAAGTGTTCGTATGAgaGaaaaaaaCGAGCAATGTT
GCGGAGCTACCCATATCGAAGACCTACTTGCTTTTACAATATTTGAACTC
ACATCTTATTGAACACACAACAAAAGAAGCGAGATTTATCAAAGAATTGA
TCGAATGTCTCAAAGTGTTCGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:150739..153729 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 592-738:2845 |
| Aaloc | 433-591:2050 |
| Aaloc | 223-432:1026 |
| Aaloc | 136-222:673 |
| Aaloc | 1-135:1 |
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