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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:144246..148249+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040313 ID=XLOC_040313|Name=XLOC_040313|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4004bp|location=Sequence derived from alignment at sc0000019_pilon:144246..148249+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAATGGAACCTTCTTGTTTGCCAACTCGAAAACTTAATCGATGT
CGATTGTTTTATACACTCCAATCACGCCAAATCTGCCCTGTCCGGAATAG
AGAGTCCAAATTTCGGACAACGTCACACTCATGCTGCGTCCAAAGATGAT
GTTTTAAGTAAAAAGAAATTGTCATCAGATAAAAAAGAGGTCGGTGGAGA
TTTAGTTGAATTACCGGTGAAAATGTCAGGCCGGCTATCCAACTTGTCTG
TTCAAGGTATGATTGTTTTTTCTTCCTCACTTTTCTTTCAGACCTGATAC
ATGATTtgttttctataagcataacgtaCAGGCTCAGTTTTTAGTACTAA
GAATAATAGAATACTTAAGCACAATGCGAGTCTAGAGTTAGAcgcttgct
tataaaaaagcatttaTCTACAGAATCTTTAAGGTAAGACATATAAGACA
TTTGTTCGAGCGATAATTCGACGCTTACGTGTCTTTTTCAAAACGTCCTT
TTCATAAgatcatctaaaatttttgaagccttagctttttgagttttagc
ctaaaattgttcttaacatgttcttattttcaccatttattGAGCATTTt
caaccattttcctaagatatcgggtattttagagccCATACAGCTTTAGA
ATGTTCGTAATATAGTAATAGGCCATCAAAGGCTTAcgtcttatatagtt
tgctcttataaaaaaaatgtgtacattTCTTAACTGCGCTTTGTGTGTTA
TTGGTATTGATTGATTGGTGTAAACTCTAGGGGAGTGGCAGATTAAAGTT
CGGTGGaaaaaaaGGCCAACAAGGTAAAAAGACaattcaattcatgatat
gcaccattgcaatgtcttccacggacccaactgCTGATTGGCTGagtgac
gtattgattgattttacgtcacttacaaccaatcagcttttgggtctatg
atgtaatgtcagaagacattccAATGATCTGCAATGATGCATATTATGAA
TATTTATGTTAATAATCCCATTATCTTTTTAGGTATCTTGGAGAACAATA
AAGACGCCATCCCACAAATCATTGCTGATTGTCTGGTGAGACAAGGTGTT
CCCGGACCATGCCTGGGTACGAAGAAACCAAAACAATCACTAACATTCAG
AGGTAACGGCAGTTTCAAACCTCATACTGGAGCTGTTTTTATTGAGTGTT
AATTATATAGTTAATATAAAAGCGTTATACAGTGGTGTCTCCAAACgcaa
acacgcacggggaacacaaatttgttcgaagtCTGGAAATTTCGATTAGA
TTAGTAGAGCGTCGATTATGCGAATTTCTTGTTGATGGTGACTTTTAATA
ATTTCGAATAATATAGAGtattgaatagtagaacgtcgagtTAGAGAGAA
TGCCACCTGTAATTTTTTATCAAGCATTTTATTATTCTTGTTATTTTTGC
TGATCACCAGGTCGCTTAGCAACAGTTAATCAAGGCCACCCATCATCTAC
AGATGTTCAAGTGCATGATGATGTTCCTATGGAAACCGATGATCAACCGA
ATAATGAAATGGATAGTCCTTCTACGGACCAATCAGAAACACTCACTGGT
AACACGTGATCATATTTTAACTAATAAAAATTGCCCAACAAAGGAATCAA
GAATCCCGCTTATTATTAGGACTCTTGATGTTTGATTTAGACATGCTAAT
TGCCCGATGAATATAATCTCGATTTGCTATTTTTGGttaatagatttttt
ttgaagattctttATCGTCCGTATTTAACGTTTCTAGGGGATACATTAAA
TGGTTTTGCTTACACAGCAATtttagacaaaagaaaaagaacaactTTCT
CCCCCTCCCGTGCCGCGcgagcacaaattttgacaaactattttatagtt
tttctgctttgtcagcataacaGGCGCGCCTCCTTTCtacatctaaaaaa
aaaactttaaattttcttgTTAGAATCCATAGAAGCCAGTCTACAGTTGA
ACTTTGAATTTTGTGAACTTCTCTTTGTTTTTGCAGCTTTAATCGAACTG
AGAGAGAAGTTTCCATATAGTTTGGAGCAAGATCGACTATGGACTCATTG
TGTTTGGGAATCTATTATGGTGTGGAATGAGGATACTGAGGTaccgtatt
catgatatgcaccattgcaatgtattccacggacccaacagctgattggt
tgaaagtgacgtattgactgattttatgtcacttacaaccaatcagttgt
tgCGTCCTTGGTGtgatgtcagaagacattgcaatggtgcatatctgGTG
CATAATTGTTCATTCACGAATCGGAGCTTTAAAACCATTAAGTGCCGATC
TCGTTATCTTAGATCGTATTTTTTTCGGTCCTTTTTTTACCGGTGAGTCT
AGGAGCGTCACCATGCCATTGCATTTTGACCCTGCCTGAGATTAACATTT
TTCCTTAGTTGTGTTTTGTAGGTgcatttgaaatcaaagaatatTAGAAA
ATTTGGTACGAAGTGATTGTATTTAATTGCTTTATGGTTAAACATACCGC
GTTGCATCAGTGTTCAACTCTTGAAAGCTTTTGCATTGTCTTTGTAGTAG
TATTCATCGAAGAAATTGTCCAACGATGTTTAGACATTTCATCTAGGCTT
GAAGTTATCTTGGAGGCTAAAGAGGGTTCAGTCTTCCCTTTAATCTAAGA
TTCAATGCGGTGGCTTCAGATATTTGATATCAATCCTACATGGCAAGGGT
TGGTAGGTGTAGAGGCAACGACCGTCTACCGTAATGAGTACTGATGTCTG
TGTCAAACATCTCAAACCAACgaaagtttttcagaatttcggGCAAATAT
TGCGATTTTGGAAGGATTCATTGGCTACTACTCTTTGTAACAGAAGGGTT
TTCACCAATAAATGAGTCACGCAGCACATATTTGtaatcaaatatgattc
aaaactaaaaagtaaatacaaaatgaaaatcaaaatctaaacaaaaataa
atgacacgcctacttttatacaaaaagttgacaaaagttGAGAACTGACC
TAAATCCTTTATAAAGTCTACTTGAAATTGAACAATATTTgaatacaaaa
gtgaatagaaaagtcttgaaattgaaatgtaataaatataatatataaat
gaataatTACCAGTATGCCAGGAATGGGGAGCTGCAAAGTGTGAAGTCAA
AAAGTGAAAGTGCAaacaaatgaatgaataaatgatgTGAAATCTTGATG
TAATTTATAGAGTAATTGAATGAATTGAAGTATATGAAAACTAAGTATTT
GATGCCATTTGTATTTAGATGTCGACTCTTCAAAGTCTGAGTGACGACTG
AATGATGATGTGTGATGATGTGGCTTTTGAAGTATGATATATAAACAAAT
AGCAAAGTGGATAAATACTAAACATAGttgacaaaattgataaataaata
taaattaatttatttctatgcataaattattataaataaaCTTGAATTGG
GAtttgtattttgcagaacagAAAAACTACTAGAAAAAGGCAAAGTGGAC
ATGcaataaaatgatgaaaatgtaAATAGATCCTAAACTGAAAGCTGTGA
TCAAATTTGAGATATGACTTGATCATTAGAAATGTTGCAGTCTTGAGAGT
GTACAACCCCGCTGGGTGAGGTGTGATGGATTTTCGAACGTTACGTCGCA
GTTTTTGATGAATCACGtgacgttcgaaaatctatccCAACTCACCTAGC
TGGACCAGCCCACCTCCATATAAACTGCCCCTTAACAATCATTTGTTGTG
TAAAGTTTTTAGAGAAATTCCCCTTGTgatcaaatattatgactttcatT
GTAGGATATTTCGATGTTACGAAGTGCATTGATCTATTTATCGTGTATTC
ACAATGCGCATGTTCAACAAGGTCTTGGTGTCATGATGTGGAAAGCTGTG
TTTAATGAAACTATCAAATCAGCGCTCTCCCTCATGGACAAGGTACGTAT
GTAG Coding sequence (CDS) from alignment at sc0000019_pilon:144246..148249+ >XLOC_040313 ID=XLOC_040313|Name=XLOC_040313|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1536bp|location=Sequence derived from alignment at sc0000019_pilon:144246..148249+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAATGGAACCTTCTTGTTTGCCAACTCGAAAACTTAATCGATGT
CGATTGTTTTATACACTCCAATCACGCCAAATCTGCCCTGTCCGGAATAG
AGAGTCCAAATTTCGGACAACGTCACACTCATGCTGCGTCCAAAGATGAT
GTTTTAAGTAAAAAGAAATTGTCATCAGATAAAAAAGAGGTCGGTGGAGA
TTTAGTTGAATTACCGGTGAAAATGTCAGGCCGGCTATCCAACTTGTCTG
TTCAAGATGGAGAAATGGAACCTTCTTGTTTGCCAACTCGAAAACTTAAT
CGATGTCGATTGTTTTATACACTCCAATCACGCCAAATCTGCCCTGTCCG
GAATAGAGAGTCCAAATTTCGGACAACGTCACACTCATGCTGCGTCCAAA
GATGATGTTTTAAGTAAAAAGAAATTGTCATCAGATAAAAAAGAGGTCGG
TGGAGATTTAGTTGAATTACCGGTGAAAATGTCAGGCCGGCTATCCAACT
TGTCTGTTCAAGGTATCTTGGAGAACAATAAAGACGCCATCCCACAAATC
ATTGCTGATTGTCTGGTGAGACAAGGTGTTCCCGGACCATGCCTGGGTAC
GAAGAAACCAAAACAATCACTAACATTCAGAGGTATCTTGGAGAACAATA
AAGACGCCATCCCACAAATCATTGCTGATTGTCTGGTGAGACAAGGTGTT
CCCGGACCATGCCTGGGTACGAAGAAACCAAAACAATCACTAACATTCAG
AGGTCGCTTAGCAACAGTTAATCAAGGCCACCCATCATCTACAGATGTTC
AAGTGCATGATGATGTTCCTATGGAAACCGATGATCAACCGAATAATGAA
ATGGATAGTCCTTCTACGGACCAATCAGAAACACTCACTGGTCGCTTAGC
AACAGTTAATCAAGGCCACCCATCATCTACAGATGTTCAAGTGCATGATG
ATGTTCCTATGGAAACCGATGATCAACCGAATAATGAAATGGATAGTCCT
TCTACGGACCAATCAGAAACACTCACTGCTTTAATCGAACTGAGAGAGAA
GTTTCCATATAGTTTGGAGCAAGATCGACTATGGACTCATTGTGTTTGGG
AATCTATTATGGTGTGGAATGAGGATACTGAGCTTTAATCGAACTGAGAG
AGAAGTTTCCATATAGTTTGGAGCAAGATCGACTATGGACTCATTGTGTT
TGGGAATCTATTATGGTGTGGAATGAGGATACTGAGGATATTTCGATGTT
ACGAAGTGCATTGATCTATTTATCGTGTATTCACAATGCGCATGTTCAAC
AAGGTCTTGGTGTCATGATGTGGAAAGCTGTGTTTAATGAAACTATCAAA
TCAGCGCTCTCCCTCATGGACAAGGTACGTATGTAGGATATTTCGATGTT
ACGAAGTGCATTGATCTATTTATCGTGTATTCACAATGCGCATGTTCAAC
AAGGTCTTGGTGTCATGATGTGGAAAGCTGTGTTTAATGAAACTATCAAA
TCAGCGCTCTCCCTCATGGACAAGGTACGTATGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:144246..148249 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 619-768:3855 |
| Aaloc | 517-618:2039 |
| Aaloc | 379-513:1463 |
| Aaloc | 259-375:1035 |
| Aaloc | 1-255:1 |
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