XLOC_040304 (mRNA) -

Overview
NameXLOC_040304
Unique NameXLOC_040304
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000304_pilon:37359..38441-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040304 ID=XLOC_040304|Name=XLOC_040304|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1083bp|location=Sequence derived from alignment at sc0000304_pilon:37359..38441- (Clytia hemisphaerica_ch_hm2_pilon)
ACGAAATCATATGGTAGTACTGCGCCTTTGAATCAAACTAAAACACAACG CGACGCTGCGACAGATCAACCAAAAATGGGTTTTTCTAAGATCCTTTTGT TGGTCAGCTTATTAAGCCTGGGAAACCTACCAGAGACAGGTGGTTTAAGT CAAGAGGAACAGTTATGTAAATATTCCTTTCCCAACGAACCTGGCAAAGC TTATGTATGCATGGGCGTACGTGGATTAGCCAATCACGTTCCAGCAGGTG CCGTCCTTATTTTCGCCCTGGATTATTGGTTTGGTATTGATCCTAAACCC TGGGATTTGGTGAAAAAAGATGTGGAAAAACTGATTGATGAGAAATTTGA CGCGTATACGATCAAATCGATGAACCAATGGCATCAATCAATGTCGAATC GAGTCCAATCGTGTAAACGAAAAATCAACCCTACTATTCGTTTTTCATGC TACAAGAATCTGCAAGAAGATTTATCAGGTTATGAACCTCTGTTTCGTGG TACCACTACTAAAGAGATTGCAATGTCTATTAAATATTACGATATCTTTG TGACAACTTATATGTCTGTGTCACACGTGCTTCGTAACATGTCCAGTCCA ACAATGCAAGCGTCCATCGACCGTGATATCAAATTCAAAGCTAAAAAGTT TGCTACTTATTTGACCAGAGCTGTTAAAACCACCAAAGGATATAGCTGCC GTTATATCAAAGTCAAATTAGAAGAAAGTTACGTGTTGTGGAAAGAAGAT CGTTTAGTTTGGCCTAAAGATGAAGATATCCCGAAATATCTGGATTCAAG AATCGAAGACGTCCGAAAGGAACTGACAAACAGTTCTCACAAATGCCGTT ACTACGACACAACCAATTCATACATCTCCAAAGTTATTGATATCAGAGAC GGTAGCGAGTATCCAGGGGGTGGCTTCCAGTATAAATACTGTCGCAATAG TCTTGCGATTGCTGATATGGTCCCCCTGACGTTCGCTTATTGGAAACCTT TCATGAAGATGTGTGGTGATTCTGATGATAAGAAATGGATCCATAAAATC GAAGCTCGATTGGAACTCTTGAAGCACATGTGA

Coding sequence (CDS) from alignment at sc0000304_pilon:37359..38441-

>XLOC_040304 ID=XLOC_040304|Name=XLOC_040304|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2166bp|location=Sequence derived from alignment at sc0000304_pilon:37359..38441- (Clytia hemisphaerica_ch_hm2_pilon)
ACGAAATCATATGGTAGTACTGCGCCTTTGAATCAAACTAAAACACAACG
CGACGCTGCGACAGATCAACCAAAAATGGGTTTTTCTAAGATCCTTTTGT
TGGTCAGCTTATTAAGCCTGGGAAACCTACCAGAGACAGGTGGTTTAAGT
CAAGAGGAACAGTTATGTAAATATTCCTTTCCCAACGAACCTGGCAAAGC
TTATGTATGCATGGGCGTACGTGGATTAGCCAATCACGTTCCAGCAGGTG
CCGTCCTTATTTTCGCCCTGGATTATTGGTTTGGTATTGATCCTAAACCC
TGGGATTTGGTGAAAAAAGATGTGGAAAAACTGATTGATGAGAAATTTGA
CGCGTATACGATCAAATCGATGAACCAATGGCATCAATCAATGTCGAATC
GAGTCCAATCGTGTAAACGAAAAATCAACCCTACTATTCGTTTTTCATGC
TACAAGAATCTGCAAGAAGATTTATCAGGTTATGAACCTCTGTTTCGTGG
TACCACTACTAAAGAGATTGCAATGTCTATTAAATATTACGATATCTTTG
TGACAACTTATATGTCTGTGTCACACGTGCTTCGTAACATGTCCAGTCCA
ACAATGCAAGCGTCCATCGACCGTGATATCAAATTCAAAGCTAAAAAGTT
TGCTACTTATTTGACCAGAGCTGTTAAAACCACCAAAGGATATAGCTGCC
GTTATATCAAAGTCAAATTAGAAGAAAGTTACGTGTTGTGGAAAGAAGAT
CGTTTAGTTTGGCCTAAAGATGAAGATATCCCGAAATATCTGGATTCAAG
AATCGAAGACGTCCGAAAGGAACTGACAAACAGTTCTCACAAATGCCGTT
ACTACGACACAACCAATTCATACATCTCCAAAGTTATTGATATCAGAGAC
GGTAGCGAGTATCCAGGGGGTGGCTTCCAGTATAAATACTGTCGCAATAG
TCTTGCGATTGCTGATATGGTCCCCCTGACGTTCGCTTATTGGAAACCTT
TCATGAAGATGTGTGGTGATTCTGATGATAAGAAATGGATCCATAAAATC
GAAGCTCGATTGGAACTCTTGAAGCACATGTGAACGAAATCATATGGTAG
TACTGCGCCTTTGAATCAAACTAAAACACAACGCGACGCTGCGACAGATC
AACCAAAAATGGGTTTTTCTAAGATCCTTTTGTTGGTCAGCTTATTAAGC
CTGGGAAACCTACCAGAGACAGGTGGTTTAAGTCAAGAGGAACAGTTATG
TAAATATTCCTTTCCCAACGAACCTGGCAAAGCTTATGTATGCATGGGCG
TACGTGGATTAGCCAATCACGTTCCAGCAGGTGCCGTCCTTATTTTCGCC
CTGGATTATTGGTTTGGTATTGATCCTAAACCCTGGGATTTGGTGAAAAA
AGATGTGGAAAAACTGATTGATGAGAAATTTGACGCGTATACGATCAAAT
CGATGAACCAATGGCATCAATCAATGTCGAATCGAGTCCAATCGTGTAAA
CGAAAAATCAACCCTACTATTCGTTTTTCATGCTACAAGAATCTGCAAGA
AGATTTATCAGGTTATGAACCTCTGTTTCGTGGTACCACTACTAAAGAGA
TTGCAATGTCTATTAAATATTACGATATCTTTGTGACAACTTATATGTCT
GTGTCACACGTGCTTCGTAACATGTCCAGTCCAACAATGCAAGCGTCCAT
CGACCGTGATATCAAATTCAAAGCTAAAAAGTTTGCTACTTATTTGACCA
GAGCTGTTAAAACCACCAAAGGATATAGCTGCCGTTATATCAAAGTCAAA
TTAGAAGAAAGTTACGTGTTGTGGAAAGAAGATCGTTTAGTTTGGCCTAA
AGATGAAGATATCCCGAAATATCTGGATTCAAGAATCGAAGACGTCCGAA
AGGAACTGACAAACAGTTCTCACAAATGCCGTTACTACGACACAACCAAT
TCATACATCTCCAAAGTTATTGATATCAGAGACGGTAGCGAGTATCCAGG
GGGTGGCTTCCAGTATAAATACTGTCGCAATAGTCTTGCGATTGCTGATA
TGGTCCCCCTGACGTTCGCTTATTGGAAACCTTTCATGAAGATGTGTGGT
GATTCTGATGATAAGAAATGGATCCATAAAATCGAAGCTCGATTGGAACT
CTTGAAGCACATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040304XLOC_040304-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000304_pilongenomesc0000304_pilon:37359..38441 -
Properties
Property NameValue
Aaloc1-1083:1084