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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000304_pilon:185636..187498+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040264 ID=XLOC_040264|Name=XLOC_040264|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1863bp|location=Sequence derived from alignment at sc0000304_pilon:185636..187498+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTATCAGAAGATACCAAAACAAATtcagagaactttttaaaaaacgg
TGAAGTTAAAGAAATGAAGGATATCAAAGATGACCCATCAGCACTTCTTT
CCTCTGTCGattcaaaaaatctgaaaatcgaatCACTCAAAGAGTTATGT
TCGACTGAAATGATGAAAGCTCcgaagaaagaagagaaagttGAATCTAA
AGACATGGCTGTCCAAACAGAAGATTGCTTGTGGCTCCAGGTAATTAACG
TTTGAATGGAATTAGCCTTGAAATTATATTACGTTTTTCTTTTACGTTTT
CCGCCCTGTATCGTTTGCTTTTTATTCTAAATGAAACACTGCATATAACT
ACTAAGGGTAGTTAAACATTTTACTGTTTTATATGGTACCAATTGAATAG
GGAAAATAACAAATCAATAAGTCATTATTCCATCGTTTAATTACGAACAA
TATataatttagaaacttttttcttaattagaaacttttttcttaaacTT
CAGGAACTTATCCAGAAAGTAGTTACTGTACGCGTCAAAGCATACCAGAA
AGCTGCAGAAAAATCTGAACGAATGGACGAAAAATTATCTCCTGTTTTGA
AAAGGCTGAAGGAAGAAAATCGGGATCTTCGAGAAAAAGCATCCGTTTTG
AAACAGAAACTTCAAGCCATTGAAAGATACCAAAATTCTgctaaaaaggt
aggttttaAGACACGATGGTGTTCGTAAGAACACTTAATTTACATTGCAT
TAATGTCTAGTTCTTTCTAAAGAAAATTGCTAATGTGTTTGGAGGTATCA
GTCTTATAAGGAAATCTTTTGTATTACATTTCAATCAGCGCCCATCCAGT
AACCCGCAACCTGTAGAAACTCCACCTAAACGCATTTGTACTACAACAAA
GAGTCCTGTACCAATAAATACGACGCCGCCAGCACAATCAAACATCGGAA
ACATCAATAAAGTTCCAGTCACGTCACCTCAACCGGTTTCTTTCGCGTCT
CCGGTGAGGTCTGTTTATATTCCACCTGGACCAATTCAACACGCTCCTCA
ACAATTCTACCAGATCCTTCCTAATGGGCAACGTATGTTATTACAATCGT
TACCAACCCCGACAAACGATCCAGGATTTGTTATGATTGACCCGAACTCA
AATAACGGACATTATAATATTGGAACTCAAGTAGTGGTCGCTAATCAAGG
TCTACGCATGGCGTCTTCACATCCAAAGGACAATCGTGTGCAACAAATCG
CTCAAGTCAATGGGAAAAATTTCCCAGGAACATTAAACCCACTTCGACCG
CCTATGAGTAGATTTCAAACGAACAATGTTCGTCTTCCTGTTAGTTGGTC
AGCTCCGCCACAACAAGTCCGCCCTCAAATGATGGTCGCCCAAAGACAAC
CAGTTCCGATACAGCAACCACAGAAAGTACAAAAACCCGCCCTTCAGTCA
CCGCCAACTACAAAAACTCCACCCCCTAAACCTCCCAATTCATCTGAAGC
TCATATAGCACTACCATTTAACCCGTTACCAAAACTAAAAGCCAGTATTT
CTGCTTCAGGAAGTGGCATCATATTAACATGGGATTATGAAAAATCGGGT
GAAAACCCAGATAAATATAAAGTTGAGTGTTATCAGCTGTTTGCACATCA
GGCAAAAGGTAATATACGGCCGCCCGGCCCCATGAGTCAAGACCGTGgaa
gaaaattggaaatgtCAATGCTTTACCATTACCTATGGCATGCACTTTGA
CGCAATTTGCAACAGGTAATGTTTATTATTTTGCCGTTGTTGCAGTTGAC
ATACATGGACGTGAAGGAGAAATGTCTAATCCTTGCACTATAAGATTAAA
TCTAAATTCGTAG Coding sequence (CDS) from alignment at sc0000304_pilon:185636..187498+ >XLOC_040264 ID=XLOC_040264|Name=XLOC_040264|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2920bp|location=Sequence derived from alignment at sc0000304_pilon:185636..187498+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTATCAGAAGATACCAAAACAAATtcagagaactttttaaaaaacgg
TGAAGTTAAAGAAATGAAGGATATCAAAGATGACCCATCAGCACTTCTTT
CCTCTGTCGattcaaaaaatctgaaaatcgaatCACTCAAAGAGTTATGT
TCGACTGAAATGATGAAAGCTCcgaagaaagaagagaaagttGAATCTAA
AGACATGGCTGTCCAAACAGAAGATTGCTTGTGGCTCCAGATGTTATCAG
AAGATACCAAAACAAATtcagagaactttttaaaaaacggTGAAGTTAAA
GAAATGAAGGATATCAAAGATGACCCATCAGCACTTCTTTCCTCTGTCGa
ttcaaaaaatctgaaaatcgaatCACTCAAAGAGTTATGTTCGACTGAAA
TGATGAAAGCTCcgaagaaagaagagaaagttGAATCTAAAGACATGGCT
GTCCAAACAGAAGATTGCTTGTGGCTCCAGGAACTTATCCAGAAAGTAGT
TACTGTACGCGTCAAAGCATACCAGAAAGCTGCAGAAAAATCTGAACGAA
TGGACGAAAAATTATCTCCTGTTTTGAAAAGGCTGAAGGAAGAAAATCGG
GATCTTCGAGAAAAAGCATCCGTTTTGAAACAGAAACTTCAAGCCATTGA
AAGATACCAAAATTCTgctaaaaagGAACTTATCCAGAAAGTAGTTACTG
TACGCGTCAAAGCATACCAGAAAGCTGCAGAAAAATCTGAACGAATGGAC
GAAAAATTATCTCCTGTTTTGAAAAGGCTGAAGGAAGAAAATCGGGATCT
TCGAGAAAAAGCATCCGTTTTGAAACAGAAACTTCAAGCCATTGAAAGAT
ACCAAAATTCTgctaaaaagCGCCCATCCAGTAACCCGCAACCTGTAGAA
ACTCCACCTAAACGCATTTGTACTACAACAAAGAGTCCTGTACCAATAAA
TACGACGCCGCCAGCACAATCAAACATCGGAAACATCAATAAAGTTCCAG
TCACGTCACCTCAACCGGTTTCTTTCGCGTCTCCGGTGAGGTCTGTTTAT
ATTCCACCTGGACCAATTCAACACGCTCCTCAACAATTCTACCAGATCCT
TCCTAATGGGCAACGTATGTTATTACAATCGTTACCAACCCCGACAAACG
ATCCAGGATTTGTTATGATTGACCCGAACTCAAATAACGGACATTATAAT
ATTGGAACTCAAGTAGTGGTCGCTAATCAAGGTCTACGCATGGCGTCTTC
ACATCCAAAGGACAATCGTGTGCAACAAATCGCTCAAGTCAATGGGAAAA
ATTTCCCAGGAACATTAAACCCACTTCGACCGCCTATGAGTAGATTTCAA
ACGAACAATGTTCGTCTTCCTGTTAGTTGGTCAGCTCCGCCACAACAAGT
CCGCCCTCAAATGATGGTCGCCCAAAGACAACCAGTTCCGATACAGCAAC
CACAGAAAGTACAAAAACCCGCCCTTCAGTCACCGCCAACTACAAAAACT
CCACCCCCTAAACCTCCCAATTCATCTGAAGCTCATATAGCACTACCATT
TAACCCGTTACCAAAACTAAAAGCCAGTATTTCTGCTTCAGGAAGTGGCA
TCATATTAACATGGGATTATGAAAAATCGGGTGAAAACCCAGATAAATAT
AAAGTTGAGTGTTATCAGCTGTTTGCACATCAGGCAAAAGGTAATATACG
GCCGCCCGGCCCCATGAGTCAAGACCGTGgaagaaaattggaaatgtCAA
TGCTTTACCATTACCTATGGCATGCACTTTGACGCAATTTGCAACAGGTA
ATGTTTATTATTTTGCCGTTGTTGCAGTTGACATACATGGACGTGAAGGA
GAAATGTCTAATCCTTGCACTATAAGATTAAATCTAAATTCGTAGCGCCC
ATCCAGTAACCCGCAACCTGTAGAAACTCCACCTAAACGCATTTGTACTA
CAACAAAGAGTCCTGTACCAATAAATACGACGCCGCCAGCACAATCAAAC
ATCGGAAACATCAATAAAGTTCCAGTCACGTCACCTCAACCGGTTTCTTT
CGCGTCTCCGGTGAGGTCTGTTTATATTCCACCTGGACCAATTCAACACG
CTCCTCAACAATTCTACCAGATCCTTCCTAATGGGCAACGTATGTTATTA
CAATCGTTACCAACCCCGACAAACGATCCAGGATTTGTTATGATTGACCC
GAACTCAAATAACGGACATTATAATATTGGAACTCAAGTAGTGGTCGCTA
ATCAAGGTCTACGCATGGCGTCTTCACATCCAAAGGACAATCGTGTGCAA
CAAATCGCTCAAGTCAATGGGAAAAATTTCCCAGGAACATTAAACCCACT
TCGACCGCCTATGAGTAGATTTCAAACGAACAATGTTCGTCTTCCTGTTA
GTTGGTCAGCTCCGCCACAACAAGTCCGCCCTCAAATGATGGTCGCCCAA
AGACAACCAGTTCCGATACAGCAACCACAGAAAGTACAAAAACCCGCCCT
TCAGTCACCGCCAACTACAAAAACTCCACCCCCTAAACCTCCCAATTCAT
CTGAAGCTCATATAGCACTACCATTTAACCCGTTACCAAAACTAAAAGCC
AGTATTTCTGCTTCAGGAAGTGGCATCATATTAACATGGGATTATGAAAA
ATCGGGTGAAAACCCAGATAAATATAAAGTTGAGTGTTATCAGCTGTTTG
CACATCAGGCAAAAGGTAATATACGGCCGCCCGGCCCCATGAGTCAAGAC
CGTGgaagaaaattggaaatgtCAATGCTTTACCATTACCTATGGCATGC
ACTTTGACGCAATTTGCAACAGGTAATGTTTATTATTTTGCCGTTGTTGC
AGTTGACATACATGGACGTGAAGGAGAAATGTCTAATCCTTGCACTATAA
GATTAAATCTAAATTCGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304_pilon | genome | sc0000304_pilon:185636..187498 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1282-1461:1684 |
| Aaloc | 436-1278:839 |
| Aaloc | 241-435:504 |
| Aaloc | 1-240:1 |
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