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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000037_pilon:838244..840850+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040253 ID=XLOC_040253|Name=XLOC_040253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2607bp|location=Sequence derived from alignment at sc0000037_pilon:838244..840850+ (Clytia hemisphaerica_ch_hm2_pilon)
cCTCCAGGGCTATCAACAGAGAAAACTAATAATTCCATTCTGAGTGACCT
TGACCAAGTGGTTGCCAGTTTCACGTCCGTACACACCACATCTCAAGAAA
ACCAACATCAACAAAACCGACAGAAAGAGCAAGTCGTCCAATCCATTTCA
CATTCTCTGCAAGCTACTGTCAATGAAACGGAAGGGTTACCGATACTTCC
GGTCAATCTCCATCCCGCATTGCATTTAGAAACGGTCGTCCAGAACAGCG
GTGTGGCAGAacaagctttactgaaagatgATGGTAGGTCACCAAAAAAG
TTGTTATTCTCAATGCGATGCCATCTTGTTTTCATACTATCTTTTTCTGG
ATATCCATAAGTATGGAAATTAGAATGTTCTTCTACAATTTTATAGATTT
TACATAAACTCTTGGACTGGCATAAATCTTTTGAGATTGTGTAACCTTTA
AGCCGAGACCAGGGCTAAAACTCATCAAGTAACATCCGAATTAAACGTCG
ATGATGTTGGCCCTGAGAAAGAGAGGTACTTTTGGGAtgcgattggttaa
tttcgcaAAGATGAATCCTCAAAACTTTGTAACCTGCTTTTACCCAAACG
AAAAGAAAATCATAAATCATATTACGGAAATAAGTCCTTTTAGGAAACAG
AAATTTtcatacaagtttttttttataagaatatccaaaatttttgaagc
cttgggatgttcttaatttttgagttttaagcctaaaaatgttcttaaca
tgttctgtaatatttttgccattttgtgagtatttttgtctattttccta
taAAATTCGTTGTTCTAGagttcgcaaagccttaaaatgttcttaacttg
ttcttggcATTTTGGccatatagtttgtttttataaaaacacgtttACTG
TATATGCTTTTCAGTTCCTATGCTACCGGCCATCAAGATGAAAGATCCCG
AACAAGAAAAGAAACGGCGTAAAATTCCCGGCACCTGCGATATCTGTGGT
AAACAATTCAAATCGACCACCAACATTGCTGCACACAGGAAACTTCACAC
CGAAGAAAAGAAGTTTGAATGTCCACAATGTGGAAAGAAATTTCGACGAA
AACTTCATTTAACCAGACACGTGAAATCGCATGCTGGAATTAAAGGCTTC
TCTTGTGAGATTTGTGATGCTAAATTCAGTAGTAAATGGTAATTATCTTG
TGAAGGATCTTTATAAATCAAACGTTTACAGGTTTTCTGGTGCTTAAGTG
TTTTGTGAAAAATCAAATGGGGTGCTCAAGTCAGTTTTCGTATTTAAgtc
agtgttttttacacttttggcaaaaacgtgaaaatttgggcacttttttg
aaatataattttcaaataaagtacTTTGCAACATTCTTAACATCAAAACA
TATCGAACGACAAAGTTTGTGATATACTGTATGCAAACAATGTTACCAAA
CTCTACTTATATATATCTTCGAACAAATTTTATTTAAGTTTGAACGATTT
TATTCATGGTATTCgtaatgtttcttttttctacggacggaaacaccccg
gtttttttaaatttgcatATATTGGCAAAAACCGGAGTGTTTCCATAGAA
AATATAACATTAGGAATACCATGAATTGTTCACCCTTTAAGAAATgaata
cttttcttttccagGTACATGCAAGCACACGCAGTCATTCATACCGGAGA
TAAACCGTTCCAATGCACCATTTGTGAGAAACGTTTTAACAATAAAGCCA
ATCTCAAAAAACATAAACTAACACACGGTAACCAACGCCCTTACGTATGT
AACGTATGCGGTCAAACGTACCGTCAAAGCTATGACTTGAAACGTCATAT
GGCTTCACATACGGACCCGGTCACATCTTTCTCGTGTTCTCAGTGCGGGA
AAATCTTCGCAAGGAAATCATATCTCCAAAGACATTTATTGATCCATACT
AGCGAGCGGAAATATGAATGCACGCATTGTGGTCGTAAATTTTTACAGCG
TGGGCAATTAAATTTCCACGTGAAAAACCAACATAAAACTGTGAGAAACG
AATCGAATAATTCTGAAACCGACGCTAATATGCGAGACTCAATAAAGCCA
ATGTTACCAGACTGCAGAGGAGAGAACTCGGAATTAATCGAACCTAGACT
ATCATCCGAGAAtgataattattcaataaatgATAGTAATAAAACTAGCG
TCTATGCTATAAGGGATTCTGAGAGGTTGCCAGAGAACGTGAAGATATCG
AGGAAGTGTTCAGAAGACGACGATAATAATGAGAAAAGAGAAGTTTTATA
TTCAAAGGTCTTTGATAAGTTATCTGTTGTGCCTACGAAACAGAACGAAA
TCGCGAATCGATGTGATAAAATTGAGGCGGTTTCAAAGCagaattttaat
gaaataattCCTTTAGACAGAGATGGACAGCAAAGGAGCTATGTTGATCT
TTTATTATCGCCGGACGATAATGATAGGGCGCTGACCACAAAGACGTTAT
CTTTTGATAACGACAAAGAACAATCAAGGAAAAGTCGTGTTGTTAGGGAC
ATCTCTAATAGTCTTAATTTAACTCcaagaaattgtaaaattgttaGAAA
ATCAGAA Coding sequence (CDS) from alignment at sc0000037_pilon:838244..840850+ >XLOC_040253 ID=XLOC_040253|Name=XLOC_040253|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3000bp|location=Sequence derived from alignment at sc0000037_pilon:838244..840850+ (Clytia hemisphaerica_ch_hm2_pilon)
cCTCCAGGGCTATCAACAGAGAAAACTAATAATTCCATTCTGAGTGACCT
TGACCAAGTGGTTGCCAGTTTCACGTCCGTACACACCACATCTCAAGAAA
ACCAACATCAACAAAACCGACAGAAAGAGCAAGTCGTCCAATCCATTTCA
CATTCTCTGCAAGCTACTGTCAATGAAACGGAAGGGTTACCGATACTTCC
GGTCAATCTCCATCCCGCATTGCATTTAGAAACGGTCGTCCAGAACAGCG
GTGTGGCAGAacaagctttactgaaagatgATGcCTCCAGGGCTATCAAC
AGAGAAAACTAATAATTCCATTCTGAGTGACCTTGACCAAGTGGTTGCCA
GTTTCACGTCCGTACACACCACATCTCAAGAAAACCAACATCAACAAAAC
CGACAGAAAGAGCAAGTCGTCCAATCCATTTCACATTCTCTGCAAGCTAC
TGTCAATGAAACGGAAGGGTTACCGATACTTCCGGTCAATCTCCATCCCG
CATTGCATTTAGAAACGGTCGTCCAGAACAGCGGTGTGGCAGAacaagct
ttactgaaagatgATGTTCCTATGCTACCGGCCATCAAGATGAAAGATCC
CGAACAAGAAAAGAAACGGCGTAAAATTCCCGGCACCTGCGATATCTGTG
GTAAACAATTCAAATCGACCACCAACATTGCTGCACACAGGAAACTTCAC
ACCGAAGAAAAGAAGTTTGAATGTCCACAATGTGGAAAGAAATTTCGACG
AAAACTTCATTTAACCAGACACGTGAAATCGCATGCTGGAATTAAAGGCT
TCTCTTGTGAGATTTGTGATGCTAAATTCAGTAGTAAATGTTCCTATGCT
ACCGGCCATCAAGATGAAAGATCCCGAACAAGAAAAGAAACGGCGTAAAA
TTCCCGGCACCTGCGATATCTGTGGTAAACAATTCAAATCGACCACCAAC
ATTGCTGCACACAGGAAACTTCACACCGAAGAAAAGAAGTTTGAATGTCC
ACAATGTGGAAAGAAATTTCGACGAAAACTTCATTTAACCAGACACGTGA
AATCGCATGCTGGAATTAAAGGCTTCTCTTGTGAGATTTGTGATGCTAAA
TTCAGTAGTAAATGGTACATGCAAGCACACGCAGTCATTCATACCGGAGA
TAAACCGTTCCAATGCACCATTTGTGAGAAACGTTTTAACAATAAAGCCA
ATCTCAAAAAACATAAACTAACACACGGTAACCAACGCCCTTACGTATGT
AACGTATGCGGTCAAACGTACCGTCAAAGCTATGACTTGAAACGTCATAT
GGCTTCACATACGGACCCGGTCACATCTTTCTCGTGTTCTCAGTGCGGGA
AAATCTTCGCAAGGAAATCATATCTCCAAAGACATTTATTGATCCATACT
AGCGAGCGGAAATATGAATGCACGCATTGTGGTCGTAAATTTTTACAGCG
TGGGCAATTAAATTTCCACGTGAAAAACCAACATAAAACTGTGAGAAACG
AATCGAATAATTCTGAAACCGACGCTAATATGCGAGACTCAATAAAGCCA
ATGTTACCAGACTGCAGAGGAGAGAACTCGGAATTAATCGAACCTAGACT
ATCATCCGAGAAtgataattattcaataaatgATAGTAATAAAACTAGCG
TCTATGCTATAAGGGATTCTGAGAGGTTGCCAGAGAACGTGAAGATATCG
AGGAAGTGTTCAGAAGACGACGATAATAATGAGAAAAGAGAAGTTTTATA
TTCAAAGGTCTTTGATAAGTTATCTGTTGTGCCTACGAAACAGAACGAAA
TCGCGAATCGATGTGATAAAATTGAGGCGGTTTCAAAGCagaattttaat
gaaataattCCTTTAGACAGAGATGGACAGCAAAGGAGCTATGTTGATCT
TTTATTATCGCCGGACGATAATGATAGGGCGCTGACCACAAAGACGTTAT
CTTTTGATAACGACAAAGAACAATCAAGGAAAAGTCGTGTTGTTAGGGAC
ATCTCTAATAGTCTTAATTTAACTCcaagaaattgtaaaattgttaGAAA
ATCAGAAGTACATGCAAGCACACGCAGTCATTCATACCGGAGATAAACCG
TTCCAATGCACCATTTGTGAGAAACGTTTTAACAATAAAGCCAATCTCAA
AAAACATAAACTAACACACGGTAACCAACGCCCTTACGTATGTAACGTAT
GCGGTCAAACGTACCGTCAAAGCTATGACTTGAAACGTCATATGGCTTCA
CATACGGACCCGGTCACATCTTTCTCGTGTTCTCAGTGCGGGAAAATCTT
CGCAAGGAAATCATATCTCCAAAGACATTTATTGATCCATACTAGCGAGC
GGAAATATGAATGCACGCATTGTGGTCGTAAATTTTTACAGCGTGGGCAA
TTAAATTTCCACGTGAAAAACCAACATAAAACTGTGAGAAACGAATCGAA
TAATTCTGAAACCGACGCTAATATGCGAGACTCAATAAAGCCAATGTTAC
CAGACTGCAGAGGAGAGAACTCGGAATTAATCGAACCTAGACTATCATCC
GAGAAtgataattattcaataaatgATAGTAATAAAACTAGCGTCTATGC
TATAAGGGATTCTGAGAGGTTGCCAGAGAACGTGAAGATATCGAGGAAGT
GTTCAGAAGACGACGATAATAATGAGAAAAGAGAAGTTTTATATTCAAAG
GTCTTTGATAAGTTATCTGTTGTGCCTACGAAACAGAACGAAATCGCGAA
TCGATGTGATAAAATTGAGGCGGTTTCAAAGCagaattttaatgaaataa
ttCCTTTAGACAGAGATGGACAGCAAAGGAGCTATGTTGATCTTTTATTA
TCGCCGGACGATAATGATAGGGCGCTGACCACAAAGACGTTATCTTTTGA
TAACGACAAAGAACAATCAAGGAAAAGTCGTGTTGTTAGGGACATCTCTA
ATAGTCTTAATTTAACTCcaagaaattgtaaaattgttaGAAAATCAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000037_pilon | genome | sc0000037_pilon:838244..840850 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 544-1485:1666 |
| Aaloc | 271-540:917 |
| Aaloc | 106-267:121 |
| Aaloc | 1-105:1 |
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