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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000304_pilon:47839..50067+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040246 ID=XLOC_040246|Name=XLOC_040246|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2229bp|location=Sequence derived from alignment at sc0000304_pilon:47839..50067+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAGCGTATTGGTTACTAACCATTAGTCTCGTTTTGGTGGGCGTTCC
GTCTTTTATGAGCCAGGAGCACAATGAGATTCAAATTATTGGTATCTTTT
GGCATTGTCCACTCAATACGTCATCTGGGGACATCGCTGTTGAATCGAAC
AAAGAACAGATTTCACGAAACGTATCGCAATGGATTAACAAAACAATGAC
CGAATTGTTCCAAGAGGTTGCTAAATATCAAGTTCCAGTCAACTTTTATA
CAGAATTCACTATTTGTAAAAGTCGACAGAATTTACTTCATCTAATGACT
GACTTGTTACTTGATAATAACACGAACTATTTCCCATGGAAATACGAAAA
ATGTGCAAATAGAGTCTATGATAAGACATACGTATGGCAGAATGGACGAA
GTATCATTTTATCATATCTCCCCGATGAATTGACACAAATGTTGGTGACT
ATCACATCCTCCTTCAATATCAAAGTCCGCTCTTACTCAAACAAAAGTCA
AATCAACTCGGTCAGTAATTTATACTTTTATCCTCAATCACCGGATTTCG
GATTCTCCACAATCGCCACTTTCGTGGAAACATTAAAGGTTGCCAAATAT
GTAACCATCTTGAACGTGCACGAAAATATCAACGGAGAATCACAAGAATT
ACAAATCCTTTCTGAAAGACTCtttgaatatctttccaacttGGATAATT
TCTGTGTGAACTTAATAAACGATACTGGTATCCTACCACCGAAAGAGCTG
GTGGATTCTTTCTTAGTCCAAGAATCCCTGGTTATCATACTCGGTTATAA
CCAGAGAGCTTACGACCTGTTAAAGGAAATCGAATACTCTGGAATAGTTG
CACCAAAAAGCTTTAACCATCGCACCTGGATCAATTATCCAGGAGATCCT
TTAAATAAGCTTGTACAACAAAGCTTCGGCAAATATCCACAATTACCTGG
CCTATTTACTATCGATCATCATCGACTGTTGCTGACATCTTTAAATCCTG
GCGTACCATATTCTGATGAATACGACATTAAGTTAGACATTATTGGTATA
CTGACAGAGTTTTATTATGCCATTCAGAAAAATAGGATAGGGATATCGCA
CGAATGTTACGTGCATTATTTGTGGCAAAATTTTCTCAATGCTAATCGTG
GTCTCTTTGAAGGGTATACCAGTACAATGGTTACAATGAATCAAGTAAGA
ACACGCATGTATGAATGGCCCTTAGACAATACTTCATGGAAACAAACAGA
CTTGAAATGCCCTGGTAAAAAGAGCTGTGCTAAAGGATATGAGAATCGAT
TCGGAATCTACACAAATATGAACTTCAGTCAGTTTAAAGGTTGGTTTTGC
TCTACCTGTCGAAAGGGTTATTATAAATATACCATAGGGAATTCGTCTTG
TAGAAAATGTCCCTTACCAATGATATCCAACAATGACCGGATTTCTTGTC
AAGATCCCTACCAAAACAAAGATTTATCCTTAGAAGAAAAACGGGTTGTC
ATCGTCTTATCGGGATGTTGTGCAGGTATATTTCTGTCTTCGATCGTGAT
CGTTGTCTTTATTACTCACTGGAAAACTCCTATCGTTAAGAGCTCAGATC
CAACTTTATTTAGTTTAGAAATGTTCAAAATCGTTACTCTATTTGCACTG
ATACCTTCATTGTTTCTGAGTGAAGCATCATATTGGAAATGTGTTGTACG
ACCTATCGTTATTGGGCTTTTACAGAGTCTTCACCTTGGTCTTATGGTTA
CCAAGACTTACAAAGTTCACCAAATCTTCGCATCAAATTACCGTTTGAAT
CGAACCGATTTCGCCAAAGTCTCAGCATCTCAAGTTTTCGTCATTCTAAT
CTTTCTACTCATCAACTCTTTGCTTTTATTGACCCTGTTTAAAACACAGA
CCGTTACCGTAGAAACAATACTACACAAAGATTTACTCATCCGTAAGACA
TATTGTTCCTCAGATGCTTTCATAGTCCAGCAATTGCCATTCCATTTTCT
CTTGCTTGTCCTATGTGGATATCAAGCATACAGGTGCCGTAACCTACCAA
GCGTCTATAACGAGTCGGTTAAATTCCTATACAACGTTTTCATCACTTGC
GTATTATTCAGCATGATGGTGATGTTGTATTATACACAAAAAGATCCTGT
GGATCGCCAAGTAGCTCTAATGATGGTGCTGGGTATCATAAACAGTGTAT
CGCTAATGATTCATTTCTCCCCGAAATGT Coding sequence (CDS) from alignment at sc0000304_pilon:47839..50067+ >XLOC_040246 ID=XLOC_040246|Name=XLOC_040246|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4458bp|location=Sequence derived from alignment at sc0000304_pilon:47839..50067+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAGCGTATTGGTTACTAACCATTAGTCTCGTTTTGGTGGGCGTTCC
GTCTTTTATGAGCCAGGAGCACAATGAGATTCAAATTATTGGTATCTTTT
GGCATTGTCCACTCAATACGTCATCTGGGGACATCGCTGTTGAATCGAAC
AAAGAACAGATTTCACGAAACGTATCGCAATGGATTAACAAAACAATGAC
CGAATTGTTCCAAGAGGTTGCTAAATATCAAGTTCCAGTCAACTTTTATA
CAGAATTCACTATTTGTAAAAGTCGACAGAATTTACTTCATCTAATGACT
GACTTGTTACTTGATAATAACACGAACTATTTCCCATGGAAATACGAAAA
ATGTGCAAATAGAGTCTATGATAAGACATACGTATGGCAGAATGGACGAA
GTATCATTTTATCATATCTCCCCGATGAATTGACACAAATGTTGGTGACT
ATCACATCCTCCTTCAATATCAAAGTCCGCTCTTACTCAAACAAAAGTCA
AATCAACTCGGTCAGTAATTTATACTTTTATCCTCAATCACCGGATTTCG
GATTCTCCACAATCGCCACTTTCGTGGAAACATTAAAGGTTGCCAAATAT
GTAACCATCTTGAACGTGCACGAAAATATCAACGGAGAATCACAAGAATT
ACAAATCCTTTCTGAAAGACTCtttgaatatctttccaacttGGATAATT
TCTGTGTGAACTTAATAAACGATACTGGTATCCTACCACCGAAAGAGCTG
GTGGATTCTTTCTTAGTCCAAGAATCCCTGGTTATCATACTCGGTTATAA
CCAGAGAGCTTACGACCTGTTAAAGGAAATCGAATACTCTGGAATAGTTG
CACCAAAAAGCTTTAACCATCGCACCTGGATCAATTATCCAGGAGATCCT
TTAAATAAGCTTGTACAACAAAGCTTCGGCAAATATCCACAATTACCTGG
CCTATTTACTATCGATCATCATCGACTGTTGCTGACATCTTTAAATCCTG
GCGTACCATATTCTGATGAATACGACATTAAGTTAGACATTATTGGTATA
CTGACAGAGTTTTATTATGCCATTCAGAAAAATAGGATAGGGATATCGCA
CGAATGTTACGTGCATTATTTGTGGCAAAATTTTCTCAATGCTAATCGTG
GTCTCTTTGAAGGGTATACCAGTACAATGGTTACAATGAATCAAGTAAGA
ACACGCATGTATGAATGGCCCTTAGACAATACTTCATGGAAACAAACAGA
CTTGAAATGCCCTGGTAAAAAGAGCTGTGCTAAAGGATATGAGAATCGAT
TCGGAATCTACACAAATATGAACTTCAGTCAGTTTAAAGGTTGGTTTTGC
TCTACCTGTCGAAAGGGTTATTATAAATATACCATAGGGAATTCGTCTTG
TAGAAAATGTCCCTTACCAATGATATCCAACAATGACCGGATTTCTTGTC
AAGATCCCTACCAAAACAAAGATTTATCCTTAGAAGAAAAACGGGTTGTC
ATCGTCTTATCGGGATGTTGTGCAGGTATATTTCTGTCTTCGATCGTGAT
CGTTGTCTTTATTACTCACTGGAAAACTCCTATCGTTAAGAGCTCAGATC
CAACTTTATTTAGTTTAGAAATGTTCAAAATCGTTACTCTATTTGCACTG
ATACCTTCATTGTTTCTGAGTGAAGCATCATATTGGAAATGTGTTGTACG
ACCTATCGTTATTGGGCTTTTACAGAGTCTTCACCTTGGTCTTATGGTTA
CCAAGACTTACAAAGTTCACCAAATCTTCGCATCAAATTACCGTTTGAAT
CGAACCGATTTCGCCAAAGTCTCAGCATCTCAAGTTTTCGTCATTCTAAT
CTTTCTACTCATCAACTCTTTGCTTTTATTGACCCTGTTTAAAACACAGA
CCGTTACCGTAGAAACAATACTACACAAAGATTTACTCATCCGTAAGACA
TATTGTTCCTCAGATGCTTTCATAGTCCAGCAATTGCCATTCCATTTTCT
CTTGCTTGTCCTATGTGGATATCAAGCATACAGGTGCCGTAACCTACCAA
GCGTCTATAACGAGTCGGTTAAATTCCTATACAACGTTTTCATCACTTGC
GTATTATTCAGCATGATGGTGATGTTGTATTATACACAAAAAGATCCTGT
GGATCGCCAAGTAGCTCTAATGATGGTGCTGGGTATCATAAACAGTGTAT
CGCTAATGATTCATTTCTCCCCGAAATGTATGTTAGCGTATTGGTTACTA
ACCATTAGTCTCGTTTTGGTGGGCGTTCCGTCTTTTATGAGCCAGGAGCA
CAATGAGATTCAAATTATTGGTATCTTTTGGCATTGTCCACTCAATACGT
CATCTGGGGACATCGCTGTTGAATCGAACAAAGAACAGATTTCACGAAAC
GTATCGCAATGGATTAACAAAACAATGACCGAATTGTTCCAAGAGGTTGC
TAAATATCAAGTTCCAGTCAACTTTTATACAGAATTCACTATTTGTAAAA
GTCGACAGAATTTACTTCATCTAATGACTGACTTGTTACTTGATAATAAC
ACGAACTATTTCCCATGGAAATACGAAAAATGTGCAAATAGAGTCTATGA
TAAGACATACGTATGGCAGAATGGACGAAGTATCATTTTATCATATCTCC
CCGATGAATTGACACAAATGTTGGTGACTATCACATCCTCCTTCAATATC
AAAGTCCGCTCTTACTCAAACAAAAGTCAAATCAACTCGGTCAGTAATTT
ATACTTTTATCCTCAATCACCGGATTTCGGATTCTCCACAATCGCCACTT
TCGTGGAAACATTAAAGGTTGCCAAATATGTAACCATCTTGAACGTGCAC
GAAAATATCAACGGAGAATCACAAGAATTACAAATCCTTTCTGAAAGACT
CtttgaatatctttccaacttGGATAATTTCTGTGTGAACTTAATAAACG
ATACTGGTATCCTACCACCGAAAGAGCTGGTGGATTCTTTCTTAGTCCAA
GAATCCCTGGTTATCATACTCGGTTATAACCAGAGAGCTTACGACCTGTT
AAAGGAAATCGAATACTCTGGAATAGTTGCACCAAAAAGCTTTAACCATC
GCACCTGGATCAATTATCCAGGAGATCCTTTAAATAAGCTTGTACAACAA
AGCTTCGGCAAATATCCACAATTACCTGGCCTATTTACTATCGATCATCA
TCGACTGTTGCTGACATCTTTAAATCCTGGCGTACCATATTCTGATGAAT
ACGACATTAAGTTAGACATTATTGGTATACTGACAGAGTTTTATTATGCC
ATTCAGAAAAATAGGATAGGGATATCGCACGAATGTTACGTGCATTATTT
GTGGCAAAATTTTCTCAATGCTAATCGTGGTCTCTTTGAAGGGTATACCA
GTACAATGGTTACAATGAATCAAGTAAGAACACGCATGTATGAATGGCCC
TTAGACAATACTTCATGGAAACAAACAGACTTGAAATGCCCTGGTAAAAA
GAGCTGTGCTAAAGGATATGAGAATCGATTCGGAATCTACACAAATATGA
ACTTCAGTCAGTTTAAAGGTTGGTTTTGCTCTACCTGTCGAAAGGGTTAT
TATAAATATACCATAGGGAATTCGTCTTGTAGAAAATGTCCCTTACCAAT
GATATCCAACAATGACCGGATTTCTTGTCAAGATCCCTACCAAAACAAAG
ATTTATCCTTAGAAGAAAAACGGGTTGTCATCGTCTTATCGGGATGTTGT
GCAGGTATATTTCTGTCTTCGATCGTGATCGTTGTCTTTATTACTCACTG
GAAAACTCCTATCGTTAAGAGCTCAGATCCAACTTTATTTAGTTTAGAAA
TGTTCAAAATCGTTACTCTATTTGCACTGATACCTTCATTGTTTCTGAGT
GAAGCATCATATTGGAAATGTGTTGTACGACCTATCGTTATTGGGCTTTT
ACAGAGTCTTCACCTTGGTCTTATGGTTACCAAGACTTACAAAGTTCACC
AAATCTTCGCATCAAATTACCGTTTGAATCGAACCGATTTCGCCAAAGTC
TCAGCATCTCAAGTTTTCGTCATTCTAATCTTTCTACTCATCAACTCTTT
GCTTTTATTGACCCTGTTTAAAACACAGACCGTTACCGTAGAAACAATAC
TACACAAAGATTTACTCATCCGTAAGACATATTGTTCCTCAGATGCTTTC
ATAGTCCAGCAATTGCCATTCCATTTTCTCTTGCTTGTCCTATGTGGATA
TCAAGCATACAGGTGCCGTAACCTACCAAGCGTCTATAACGAGTCGGTTA
AATTCCTATACAACGTTTTCATCACTTGCGTATTATTCAGCATGATGGTG
ATGTTGTATTATACACAAAAAGATCCTGTGGATCGCCAAGTAGCTCTAAT
GATGGTGCTGGGTATCATAAACAGTGTATCGCTAATGATTCATTTCTCCC
CGAAATGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304_pilon | genome | sc0000304_pilon:47839..50067 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2229:1 |
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