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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000304_pilon:135667..142840- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040243 ID=XLOC_040243|Name=XLOC_040243|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7174bp|location=Sequence derived from alignment at sc0000304_pilon:135667..142840- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTACAGTATCACCAGAAGGTCTTCTTTTATGCATTGTATTTGCGCTT
TTGAGGACTCCGGAGTGACTGAAGCGATTTGGAATAACCCACATTTGTGA
GCCATAAAATCGTGGACGTTAAAAGTGCTTGTTTACCGTCGTCCTCAATT
AGGGAGGATCTATATAAATTAGAAGCTAACTGTTCCCGTTAGTAGCGAGT
TTTCCTGCGACGGAGACGGTCAGCTTCTGATTTGTCTAAATCCTGCGTGA
GTGTGATTGATTGATTGGTGCCGACTAGACTTTAAAAACAAGGATTAGAA
TTGTGTTCCATAGTATTCCCCGACTATTATACTAAAGTCAGCCTTTGTTT
CAAAATGTTACATATTCTTGATGGTAGCAAAATTTTGACAACGTCTTTTC
TATTTATACAGCATTCGCCATTTATCACAAGAGCGAAAGACGAAATAGTT
CTCACTGATGCTATAAAAGAACATCTCTCAAAATTACAGGGTACATTGAA
TCTCGCCGGTTAGTGCATGCAATCATATGATTTTACAATCTCTTTTCAAT
CACTGCATCTTTGTAAAAATGGTAATGTAATGTTTACATATAGGAAATTA
CAGTTGACGCTCTCCAATCAATTTTCAAGGGAAATTGTAATTTCATCGAA
TAGGGGAGCGTATCGAATAGTAGAGCATAGTTTTATGAGAATTGCTTATT
GATAGTGACTAATTCAATATAAGGCACCTTATTGAATAGTAGTGCGTAGT
TTATTAGGAGTTTCTTGTTGACAGTAACTTTCAATATTTGTCGAATAATG
GAGCATATCGAATAGTAGAATGTCGAATTAGAGAGTGTCAACAAAATCCA
ATTATTTGTAATTCGCAGTGTACACGTTTTTTTATAAGAACAAACTATAT
AAGAATATAAAGCTTCGATGGCCAAAATGTTAAGAAAAGTGAAGAACATT
CTAAAGGCTTTTTGGACCCTTAAACATCTTCCTTAAATACTCTCAAAATG
ATGAAAATAAGAACATGTTAAGAACATTTTTAAAAAGTTAAGAACATACA
AAAAAATTGAATCTTATAAAACGTGATATATCTTTTTACTTGCTAGAAAC
TCAAGTTGTAATGATAGTTTGACTTTTTTATCTTTGCTATTTTAAAATGC
TTTTACTTGATAGGTCAACAATCAATAAACTCCACTGAGCCCTTTGATGA
ATTGACGGAAGGCTGCAACGAAGAAGGATGTTGTAAGCTGAAAGATTGCC
ACATCTTGAACGCTTGTAAGATTTTGTTATCCTCATCTTTGGTCAAAAAT
TTAAGTCTTATAATTTTACTGTCTGTATGTATGCTTATGTCACAAATTCT
CAGTGAAGAAATTGGCGGTCGAAACTTTTCAATTTTGGGTTTTTCAACGA
AATGAGGCTAATACCTTTGATCTAGACTGAGCACATTTCTTGCAAATCGT
TCTCGATTTTTACGGACTTTCTTCTCATTATTTCAGCTAACAACTTTCTT
ACCAGCATATTTGACAGGAAGATAATTAACCCTCGTAACAAGGCTATCAT
TATGAATTATGATAATAAAGATTACGTCATACCGAAGAAAAGCAGTTTTG
TGGTTTCTGAATTTAGGAATTGGGTTTTCCAGTGCGATTCACTAGGTATA
CAAGCTTGTTCTGGCTCGTTTCTCAATTATGATACTCACCCATTCGAGAT
ACTAGACCCCATTTGCAGCGTTCGTAAAAATATTGACCTCTTTTAGTAGC
TAATTTTACGGCCAATACATTATTACACTTATATAACTACTCAAGCTATC
AACGTGATTTGGTTACTTCACGTTAATTATAACCCTTTAACAAAACTTGA
GTTAGGTAATTCTCGAAACTTCTGTCATTCACATTGATAGATTGTCGAAC
TCTTTTATCTCATATACTTTTTTTATATAAGCATACAGGAAAATCGGGTC
GAGGCTCAAAATACTTAGCAAAATGTTATTTTCAGCATTAATTTATGCTT
ATTCACATGCTTGGACTTCGATTTGTTGATTTCTTTGTTTCATGAACATT
GATTCGGCTCAAAGAATGAACGTTTTTTTTTATTTGGCGCCGCCTAAAAT
CTTTGTTCTAAGAAAGCTAAAACAGCTTTAAAAGTAACCCTAAAAAGGTG
AGAAGCTGCGCAAGTTTTTTTGCATTTCAACTTAGCATTGTGCTTTTTTT
CTACAGAATTTGAGCCTAAGTATGCTTATAAACGTTATGCTTACAAAAAA
AGGAGTGTTCTTGATTAGTTAAGTGAAATAAGGTAGATGAAATAAGAGTA
GACTAGATTTTGGTTTCTGTATCGTTATGTATTTGACTGTGTTTCATGTT
GCTTACCTTTTAGGAAGGAAATGTTCTGTTACGATCAATAGTTTTTTTTT
CACTTGAAAGAAGAGGCTTTATCAATCTGATTTATATCTTTTTGGACCTA
CCTCCGGGTACCCCGGTGGAGGTCCTTTAAATTAACCCATGTCCGTTCGT
CCGTTCGTCCGTTCGTTCGTCTGTTGCCAGCTTTTCTCGGGATTGGCTCA
TTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCGATGCCCAAA
ATGTGACGGAGCCCGATTTTCGGAAAAAAAATTTTTCCGGCCGAAAATGC
CGGAAATATCCCGGAAAAACTGGTTTTTTGGCACTTTCTCGAGATTTTAT
CATTAGTTTTTTCTGATTTTTTGCTCAAAGATGCGTATTAACAATGCCCA
AAACATGGCTGAGTCCGATTTTTGAGAAAAAATTTTTTCCGGCCGGGTTT
TCGGCCGAAAATGCCGGAAATATGCCGGAAATCGCCGTTTTTCTGGATTT
TCATTGGACTTTTTCCTTATAACTGGTTGTTTTTTCATTCAAAAACATTA
TTAATAGCAATGCCCACCATCAAGCATGTTTCAATTTTCAATAAAATTGA
TTTTTGAAGCCGGAACTATTTAAAAATCGCCGGAACAACCTATTTTCGCC
GGAAAGACAGTATTTCTTGAATTTCTCGAGCTGTACTTTATATTTTTTTA
TGAAATTTTGCACACTGATGCAAAATGACAATACCTAAAATGTGACGGGG
CCCGATTTTCGAAAAACATTTTTTTTCCGGCCGAAAATGCCGGAAATATG
CCGGAAAAACCGTTTTTTTTGACATTTTCTCGAATTTTCATCCTTATTTT
TCTCTGATTTTTTGCAGAATGATGTGTATTCGCAATGCTCAAAACATGAC
CGAGTTCGATTTTTGAGAAAATGTTTTTTTCGGCCAAAAAAGCCGGAAAT
TTTCGTTTTTGCAGATTTTCATTGGATTTTTTCGCTTCATGTCTTTGTTT
TTTTCAAACAAAAACATCATTTATAAGAATGTCCACGATTAAGCATGGTT
CAATTTTCAATGAAACTGATTTTGGTACAGGAACTTTCTAAAAATCGCTA
GAACAGCCGAGAATCGCCGGATTCCATGAATTTCTCGAGTTGTTCTCGTA
TTATTCTGCATTTTCATACTATTGTTCTCATTTTTCAATTGTCTTATTAC
ATCAATCTTCAGGTAGGTCCATTCAGCATGTAGCTTGTTCCAACTACACT
TCTCCTCTTCGCCAGGTGAAAAGTATGACTTGATTGTTATGGATCCTCCT
TGGGAAAACAAATCTGCTAAAAGAAAGAAAAGGTAGGCCAAAGATTTATT
AAGTTTTTATATGTTGGTTTCTGCAGCGTTCGTAAAAGTATTGACCTATT
TTAGTGGTTAATTTTACGACCAATACATTATTACACTTATATAAATACTC
AAGCTATAACCGTGGTTTGGTTACTTCACGTTAATTATAACCCTTTAACA
AAACTTGAGTTAGGTAATTTTCGAAACCCCTGTCATTCGCATTAATAGAT
TGTCGAGCTCATCTTTCCCTCGTGAAATACACGAGCATTTTTTGTCTACT
GTTTTAGTTACAACTATCTACCAGAGTATGATCTGAAGAAATTACCCATC
GACAAGATTCTTCATAATGGCGGCCTGGTGGTTGTCTGGGTAACCAATAA
ACAAAAATATTTGGAGTTCGTGCGTGATGTGTTGTTTCCATTTTGGGGTG
TCGAATTATTAGGACATTGGCACTGGGTTAAGGTACGTTTCTTTTGAAGA
ATCTTATATATTTCGGCTAATGATTGTCGTTCATACGGCTTGCATAAATC
TTTAAGTATAAAAAATTACAGTCTTTTAAATCTTTCCAACGTGAACATTT
CGGACCATCATTGAAGATTTTTAGGTGCCCCTCCACTTCGAATTAAGGAC
CCTCCTTTGAGGAAAGGTTTTCAATAAACTCAGTCGAATAAAAGTGCTTT
GAAAAATCCCCACTGTTTTGTCATTCTTTTCTTAAATTGTGATCTTTTTT
TACGTAGATCGGTGTCGACGGAGATTATATCACAAACATCTATTCTACTC
AGCGAAAGCCTTACGAACCGGTTTTGATCGGACGGAAAGTCCCTAAATTA
ACTTCGTGTGAAAAGGTTCCGGAAAACCGGATCATTTGCTCTGTTCCGCT
GAACCAACACTCACGGAAACCTCCGCTTAACCGTAAGTCTTCTATAAAGA
CAATGTTTTCTTTCATCGTGAAAGTACAGAGGTAATGGAGCCTCGATAGA
CCTTTTCATAAATTACGTTACGAACATCACTTGCCTCGTTTTGAAATTAT
TGCCTTAGTGATTTATAACTTCCAGCGGATTTTATTAAAACTACTTCCTA
TTCATAATCACTATGATAATTGTTTGAATACGAGGCAAGTATAAAAACGT
TCTCAAATATAAATTTTCTTTGAATTTAGAAACGCTCCCCTCCTATTTTA
GTTAACATACCCTTGCACGGTCTCTAAAACTCAAATTTGAACCAATTTGG
GAATGAATACTTTTTTGGACCTACCCCGGTGGAGGTCCTATAAATTAACC
TGTGTTTGTTCGTCCGTTCGTTCGTCTGTTACCAACTTTTCTCAGGATTG
AATCATAGGAATCTTTTGATTTTTGGTAGAAAAGTGCAGAATGGTGTTGG
CCAAAATGTGAAGGAGCCCGATTTTCGAAAAAAAATCTAAAAAAACGGCT
AAAAACGAGTTTTTTGGACTTTGTGAAAAATTGGATCATTAATTTTTTCT
GATTTTTTGCATGAAAGTAGGGTACCATCATAGGTAAAAGATGGCAAATT
ACTCAATTTTTTTATGAGATAGATGTTTTTTTTTGCTCACGAGGGCTTAC
TTTTGAAGAATATGTGTGTTTAGACAAGAAATTTTGGTTGCTTGGAGTGT
TCTTATAGAAAAACTGGCCAAATTCGGTATTTTTTTATAAGCACATTATC
AATTACTTAGGTATTAGCTTTTCTCGAGATTGGTTCTTTTATTCTCTATG
ATTTTTTGCACAAAGATGCATAACAATAAACTTTCGAACATGAAGGAGCC
CGATTTTTGAAAAAATATATTTTTGGGCAAATTTGGGCCAAAAAACGGAA
CAGGTTTTTTGGACTTTGTGAAATATTGGATCATTGTTTTTTTCTGATTT
TTTGCATGAATTGAAAGTAGGTAAAAGATGGCTCAAGCAGATTTTTGTAA
AACAATTTTTCGGTTAAAAAAACGCATCTTTATCTATAAGAATCACTATT
AATAAGCATACATCAATGTTCTTAGCCGAATTACTCATTTTTTTGATGAG
ATTGATGTTTTTTTTGCTCACGAAGTCTTGAATATGAAAGAATATTTCAA
GAGCATGAAATTTTGGTTTCTAAACGTTTTTTTATAATAAACAAACGACT
AATTTTGATAGATCGTCACTATTTGTGTTCTGAATGATTGTTTAATGGTC
ACGCTCACGTAGATATCAATTATTTATGTGTTAAATTCATAACCAGGTAG
GTCCATAAAAGTATCACTTGTTGAGAAATAGAATCGTTCAAAACATTTTT
TCGGTCAAGTTTTTAATTGCTAGTAAAGATTGAAGTTACTCTCCCTCCGA
GAATGCATAGTTCAGGGAATTTTAAATCGAACGTTGAAGGGTGTTGTGAT
TTCAAGAAAATTGATTGGAGACGAAGTATTTTAATTTTTAGATGTTATTT
CGTGAGTGAGTGTGGTGATTTCTAACCTCCGTTCAACGAGCTTTCACTAA
CTACACTTATACAAATGCCCAATACACCTTTTCGATCGTATTCGCGTGGT
CAGGCGCGTGCCACTTAATTATTTAATTATCCCCCTAAACTCGTTCAAAA
AGGTCGAAAAGGTCGTTGCGGCTAGTTTTATCGCATCCAATCAGATTCTG
GTATTTTCTCTCGCAATCATAACGACAATTTGTCGTTTCTGATTGTTTTG
ATAAAATAACGCGTTCCAAACAAAGAGAGAAAAAATTCTGTCATTTTTAA
TTGCTCTACTTGGGGATAACGTAGATGTTACTATTTTTGCTTTTGATAAC
AAAATATTTTTATTGCCTTGGGAATACAAAAAAAGTCTTCGGAAAAGGTT
TTTACCGAGTTTGTTTGCAAATTAGCTAATAGTACACATCTTTTTAGAGG
GATATAACAGTACTTACGAAATATGTAAACAAACAAAGAGAAAAAAAAAG
TCTGTCATTTTTAATTGTTCTACTTGGGGATAACGTAGATGTTATTATTT
TTGCTTTTGATAACAAAATATTTTTATTGCCTTGGGAATACAAAAAAAGT
CTTCGGAAAAGGTTTTTACCGAGTTTGTTTGCAAATTAGCTAATAGTACA
CATCTTTTTAAAGGGACATAACAACAGTACTTGTGAAATATGTAAACAAA
CTGTATGCAGCGGATACAAAATCAAAACAAATTTCACATGTAAAAATAAA
AAATCAAACCAAATATGGCTAATTTTGATTGTTACAATTGTTTTGTTTAG
GACACGTGATTTTAATTGTTCTCTTTAATGACACGTGGTTCGCGCAATGC
TTACATTTTACTACTTTTATGTCCCTTTAAAGTCCAAATTATACTATTAG
CTTAGAACCTTGGCTACAGTTAGCATATTTCGGCCTTGAGGCTTTTATCT
TCAGGGAATTCCCTCATCTTGATACGATCGTTTTTATTTAGAAATCCTGG
AACCTTTCCTTCCACGCAATCCAAGATGTTTGGAAATGTTTGCTCGAAGT
CTCACCCCTGAATGGGACAGCTGG Coding sequence (CDS) from alignment at sc0000304_pilon:135667..142840- >XLOC_040243 ID=XLOC_040243|Name=XLOC_040243|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1758bp|location=Sequence derived from alignment at sc0000304_pilon:135667..142840- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTACAGTATCACCAGAAGATGCTACAGTATCACCAGAAGCATTCGCC
ATTTATCACAAGAGCGAAAGACGAAATAGTTCTCACTGATGCTATAAAAG
AACATCTCTCAAAATTACAGGGTACATTGAATCTCGCCGCATTCGCCATT
TATCACAAGAGCGAAAGACGAAATAGTTCTCACTGATGCTATAAAAGAAC
ATCTCTCAAAATTACAGGGTACATTGAATCTCGCCGGTCAACAATCAATA
AACTCCACTGAGCCCTTTGATGAATTGACGGAAGGCTGCAACGAAGAAGG
ATGTTGTAAGCTGAAAGATTGCCACATCTTGAACGCTTGTCAACAATCAA
TAAACTCCACTGAGCCCTTTGATGAATTGACGGAAGGCTGCAACGAAGAA
GGATGTTGTAAGCTGAAAGATTGCCACATCTTGAACGCTTCTAACAACTT
TCTTACCAGCATATTTGACAGGAAGATAATTAACCCTCGTAACAAGGCTA
TCATTATGAATTATGATAATAAAGATTACGTCATACCGAAGAAAAGCAGT
TTTGTGGTTTCTGAATTTAGGAATTGGGTTTTCCAGTGCGATTCACTAGC
TAACAACTTTCTTACCAGCATATTTGACAGGAAGATAATTAACCCTCGTA
ACAAGGCTATCATTATGAATTATGATAATAAAGATTACGTCATACCGAAG
AAAAGCAGTTTTGTGGTTTCTGAATTTAGGAATTGGGTTTTCCAGTGCGA
TTCACTAGGTGAAAAGTATGACTTGATTGTTATGGATCCTCCTTGGGAAA
ACAAATCTGCTAAAAGAAAGAAAAGGTGAAAAGTATGACTTGATTGTTAT
GGATCCTCCTTGGGAAAACAAATCTGCTAAAAGAAAGAAAAGTTACAACT
ATCTACCAGAGTATGATCTGAAGAAATTACCCATCGACAAGATTCTTCAT
AATGGCGGCCTGGTGGTTGTCTGGGTAACCAATAAACAAAAATATTTGGA
GTTCGTGCGTGATGTGTTGTTTCCATTTTGGGGTGTCGAATTATTAGGAC
ATTGGCACTGGGTTAAGTTACAACTATCTACCAGAGTATGATCTGAAGAA
ATTACCCATCGACAAGATTCTTCATAATGGCGGCCTGGTGGTTGTCTGGG
TAACCAATAAACAAAAATATTTGGAGTTCGTGCGTGATGTGTTGTTTCCA
TTTTGGGGTGTCGAATTATTAGGACATTGGCACTGGGTTAAGATCGGTGT
CGACGGAGATTATATCACAAACATCTATTCTACTCAGCGAAAGCCTTACG
AACCGGTTTTGATCGGACGGAAAGTCCCTAAATTAACTTCGTGTGAAAAG
GTTCCGGAAAACCGGATCATTTGCTCTGTTCCGCTGAACCAACACTCACG
GAAACCTCCGCTTAACCATCGGTGTCGACGGAGATTATATCACAAACATC
TATTCTACTCAGCGAAAGCCTTACGAACCGGTTTTGATCGGACGGAAAGT
CCCTAAATTAACTTCGTGTGAAAAGGTTCCGGAAAACCGGATCATTTGCT
CTGTTCCGCTGAACCAACACTCACGGAAACCTCCGCTTAACCAAATCCTG
GAACCTTTCCTTCCACGCAATCCAAGATGTTTGGAAATGTTTGCTCGAAG
TCTCACCCCTGAATGGGACAGCTGGAAATCCTGGAACCTTTCCTTCCACG
CAATCCAAGATGTTTGGAAATGTTTGCTCGAAGTCTCACCCCTGAATGGG
ACAGCTGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304_pilon | genome | sc0000304_pilon:135667..142840 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 799-879:82 |
| Aaloc | 622-795:2768 |
| Aaloc | 448-621:3217 |
| Aaloc | 382-444:3558 |
| Aaloc | 223-378:5687 |
| Aaloc | 121-219:6010 |
| Aaloc | 22-117:6764 |
| Aaloc | 1-21:7175 |
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