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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000304_pilon:301250..304197- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040236 ID=XLOC_040236|Name=XLOC_040236|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2948bp|location=Sequence derived from alignment at sc0000304_pilon:301250..304197- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCTGAAATTTCAAATTACTCCAGTGCATTGGGACATATTCCACG
TCAAAGTATTGTTGATCGCTCCACGTATTTCCGTGTTGGTAATTCTGAAT
CGAAAAGACAACAATATGTTGAAACGGAAGCCGTACAAGATTTCCGTCAC
GGCGAACGATTGGTTGGCGTTCATTCTGAACTGCAACATGTATTCAGAGC
TAGCGAGGTAAAATTGGAAATAAATTTTGTGTATGTAAATGTTTAGTTAT
ATGCAAATTCCGCCAGTCATTATTGATTTCAACTGATGCGCAAATTATTT
AGCTCATTTAGCAATTTTCTGTTTTGGATCTAGGGTCTTGAGACCACAAG
GTTTAAAGATATGTAATAATGCAATGCATATCCATGAGAATAGAATATAG
TTAACTATCTATAACGATCTTCTCGGCATTTGAATTATGGCAAATTTACA
GGGTGTTCCATTCTCTAAATATATCAAACAGTAAGATATCTATATAAATT
ATGACGCCGCTCTGCAAAATTTGGTATTTAGCACTCTGCTGAATCTAAAG
TCAATTGCACAATATTATATAACATATCTAAATGTCATATGTTTACCAAA
GGTTAATAACTCAGTTACCAAAGAAAATGCTATACACAAACATAAACAAG
CCATTCAATGCGTGCACGAAGAAATGCGACGAACATCCATCGATCAGCGT
GTTAAACGAGAATTGAGCCGAGCCACCGAGTTCGAACGAAAGCGACGAAT
CTCCATTGTCGAGGATGCTTTGGAGAATCCTTGTAGTGAGACTTGTAAAA
ATATGCAAGCCACAAATAATCGATTGATTGAAGTACATCAAAGTTTAAAA
GAAATCTTTAAGAGAAGGGAGGTAAGTTTTTAATCAAGTTTTCTGGGTAT
AGGAATGAATCTGAACAACCCTGTCTCACAGCCCCGGTGGAAGTTTTTTT
TCTTCAATCATTGGGGATAAAAATCCCTATTGAAATCTCAATGGGGATAG
AGATTTTTTGTTTCAAGGTTAAAAAATCCAGTGTGGATGGTTTTGGAGCG
CAATTTTTAGACAAAGATTTTCGAGTGGGGATGAGATTAAAGTCAATTTC
CCAGTGGGGCTGAAATTCCAGGGTATTTTTCCCACCGGGGACCAAATATT
TACCAAATTTTCCAGTGGGACTGGGGTGTATCTGAGGTTTCTTTGCACTA
CGTGTGTATGAAAAAAGCTTCTATAAGAGATCATTGTGATTTTTAAAAGA
CACGCCTGAGAGCTGCTAATAGAAAGATGGAACAAATTTGACTTCACGAG
ATGTGATTTTGAAATTTGCTTTCAAGATGTGTTAGCTCTGTTAGCCATCA
TTTTTCCAAATAGCTTTATAATATACACCTTTTCGACCGTAGTCATGCAG
TCAGGCGCGTGCCACTACACCCTAAACTCGATCCAATTCTTATTTTAGAC
TTTTTTCTATTGCTGTTAGGCGCGAGAAAAAAAACTGTGACGGTTTTAGG
GTGGTAAAATAGACAAAAAAATGCCCGCGCGGCAATCGGCGACGGTTTTA
GGGTTGTAAAATGGACAAAAAAGTGCCCGCGCGGCAATCGGCGGCTACGG
TCGAAAGGGTGTATTGTAAAAAAAATGAAACAAATTTACTTGACTTATTC
AATTCTAGTCCATCAAAGCAGCGAAAGAGAGAGAAGTAAGGATCGGAGTG
GAAGAATCCAAAGAAATGTTACTACAACAATTACGTAGACGATCAGCGTA
TACGTCCTTAAAAGATGACATCGAAAATGAACATGTCCAACAGATCAGAG
ACTTTCATGAAAGATATCAGAATGAAGATTTTTGTCGCACTGATCAACAG
TTAATGGATGTACAAGAAGAAATGATTAAACTTTACAGGAAAAACGAGGT
AATGTTCTGCATTCTTTGGCTACTTTTGGTGGAGCAACAGAGTCTGACCC
CTTTTCTATTTGTTTTAAATCAGGCCTCATCCATAACGTACGCAAGAATT
TCCAAATATTTGACACCCATTTCCCTCTTGCATTCAGAGAAGAATATGAG
TTACGTCATTTAAACAATAGATGTATGCGTTTGCTAACCCCCTCTCCCCC
TTCATCGCGTACGTATTATATGTATGCCTCGTCAGGGAGATTGAATGCCG
ATAGGGCGGAGCGTCTCAAATTGTCTCAATAATCTAAGTAATTCATTGGC
TGAATTGGATGCAGCAGGGGGATAAAACCCACAATTCATGGTTTGAAAGG
CAAATACTCGAACACCAGCTATCAGCAGTGGATACTTTTATCGGATTAAA
TTTCACGAAATTAAATTTCGCGAATAAGCTTGAAAACAGCTGAAAAATAG
CTATTTTTGGCCACAAATAGAGACTTTTTCCGCCGAAAATGCGAATTAAA
AAATTTTATGGTGGATTTAATTTCGCGAGTCAGAAATCTCACGTGTTTTC
GCGAGTTTTAATTTCACGAAAATGGCAAAAAATTCGCGAAATTTAATCTC
GCGAAAGTTAATCCGTTTCAAGTAGTAGGGTTAAGCTGTCTTTTAAAGTC
ATACAGATAGAAAACCAATCGGTGTAGTGGATTTTACTTTGAATTGAACA
TTGTGAGAAACCTAGCCATGGTTACTGTATTTTAATTCAAAATGTTCTTT
CAACAACCAGGGTATGCGACAAGAAAAGGAAAGACAACAAATGGAGAATG
CCAAACAAAGGAAATCAATTGTGGAAGAAGAATTGGTACGCCATTTCAAC
AGAAAATGTGCTAAAACCATGTCAAACATTGAATGGGGAAGTGTGCGCAG
AAGTAACACTGACTCGATGGCACTGGCTCGAGGTCAAGGTCGCCAAATAA
AAAAGAACAAAAAGACTGCCGTCGGTTTTCGAAAACTTCAAGCCATACAT
TCAGCATTGATTTTAAGAACCATTGTAAGAAACAAAACCAAAGAATGA Coding sequence (CDS) from alignment at sc0000304_pilon:301250..304197- >XLOC_040236 ID=XLOC_040236|Name=XLOC_040236|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2010bp|location=Sequence derived from alignment at sc0000304_pilon:301250..304197- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCTGAAATTTCAAATTACTCCAGTGCATTGGGACATATTCCACG
TCAAAGTATTGTTGATCGCTCCACGTATTTCCGTGTTGGTAATTCTGAAT
CGAAAAGACAACAATATGTTGAAACGGAAGCCGTACAAGATTTCCGTCAC
GGCGAACGATTGGTTGGCGTTCATTCTGAACTGCAACATGTATTCAGAGC
TAGCGAGATGTCTTCTGAAATTTCAAATTACTCCAGTGCATTGGGACATA
TTCCACGTCAAAGTATTGTTGATCGCTCCACGTATTTCCGTGTTGGTAAT
TCTGAATCGAAAAGACAACAATATGTTGAAACGGAAGCCGTACAAGATTT
CCGTCACGGCGAACGATTGGTTGGCGTTCATTCTGAACTGCAACATGTAT
TCAGAGCTAGCGAGGTTAATAACTCAGTTACCAAAGAAAATGCTATACAC
AAACATAAACAAGCCATTCAATGCGTGCACGAAGAAATGCGACGAACATC
CATCGATCAGCGTGTTAAACGAGAATTGAGCCGAGCCACCGAGTTCGAAC
GAAAGCGACGAATCTCCATTGTCGAGGATGCTTTGGAGAATCCTTGTAGT
GAGACTTGTAAAAATATGCAAGCCACAAATAATCGATTGATTGAAGTACA
TCAAAGTTTAAAAGAAATCTTTAAGAGAAGGGAGGTTAATAACTCAGTTA
CCAAAGAAAATGCTATACACAAACATAAACAAGCCATTCAATGCGTGCAC
GAAGAAATGCGACGAACATCCATCGATCAGCGTGTTAAACGAGAATTGAG
CCGAGCCACCGAGTTCGAACGAAAGCGACGAATCTCCATTGTCGAGGATG
CTTTGGAGAATCCTTGTAGTGAGACTTGTAAAAATATGCAAGCCACAAAT
AATCGATTGATTGAAGTACATCAAAGTTTAAAAGAAATCTTTAAGAGAAG
GGAGTCCATCAAAGCAGCGAAAGAGAGAGAAGTAAGGATCGGAGTGGAAG
AATCCAAAGAAATGTTACTACAACAATTACGTAGACGATCAGCGTATACG
TCCTTAAAAGATGACATCGAAAATGAACATGTCCAACAGATCAGAGACTT
TCATGAAAGATATCAGAATGAAGATTTTTGTCGCACTGATCAACAGTTAA
TGGATGTACAAGAAGAAATGATTAAACTTTACAGGAAAAACGAGTCCATC
AAAGCAGCGAAAGAGAGAGAAGTAAGGATCGGAGTGGAAGAATCCAAAGA
AATGTTACTACAACAATTACGTAGACGATCAGCGTATACGTCCTTAAAAG
ATGACATCGAAAATGAACATGTCCAACAGATCAGAGACTTTCATGAAAGA
TATCAGAATGAAGATTTTTGTCGCACTGATCAACAGTTAATGGATGTACA
AGAAGAAATGATTAAACTTTACAGGAAAAACGAGGGTATGCGACAAGAAA
AGGAAAGACAACAAATGGAGAATGCCAAACAAAGGAAATCAATTGTGGAA
GAAGAATTGGTACGCCATTTCAACAGAAAATGTGCTAAAACCATGTCAAA
CATTGAATGGGGAAGTGTGCGCAGAAGTAACACTGACTCGATGGCACTGG
CTCGAGGTCAAGGTCGCCAAATAAAAAAGAACAAAAAGACTGCCGTCGGT
TTTCGAAAACTTCAAGCCATACATTCAGCATTGATTTTAAGAACCATTGT
AAGAAACAAAACCAAAGAATGAGGTATGCGACAAGAAAAGGAAAGACAAC
AAATGGAGAATGCCAAACAAAGGAAATCAATTGTGGAAGAAGAATTGGTA
CGCCATTTCAACAGAAAATGTGCTAAAACCATGTCAAACATTGAATGGGG
AAGTGTGCGCAGAAGTAACACTGACTCGATGGCACTGGCTCGAGGTCAAG
GTCGCCAAATAAAAAAGAACAAAAAGACTGCCGTCGGTTTTCGAAAACTT
CAAGCCATACATTCAGCATTGATTTTAAGAACCATTGTAAGAAACAAAAC
CAAAGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304_pilon | genome | sc0000304_pilon:301250..304197 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-1005:289 |
| Aaloc | 478-717:1291 |
| Aaloc | 208-477:2348 |
| Aaloc | 1-207:2949 |
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