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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000304_pilon:386877..393622- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040234 ID=XLOC_040234|Name=XLOC_040234|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6746bp|location=Sequence derived from alignment at sc0000304_pilon:386877..393622- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAACAGCAATCATTGTTTTGCTTGGTGTTATTGCTTGCGCCAGTGC
AGGTATGTCATAATTATCCCTCTGGTTTTTCGACCGTAGCATAAAGGTAG
AGCATCCAGCTACGGTGCACAAGGTTGTGGGTTCGATCCCCAGAAGGGTT
ATACCATAGATTCCCAAAATGGTACTTGACGCCTCTCTGCTTGATGCTCA
GCAACTAAAGAGACGTATCAAGGGTAAGTGGAGAAATCCAGGGAAAAGGA
ATGGAGAGCTCCACCCCTACCTTCGGGTAGCTATACGAAAAGGGAGCCTT
CGGGTCGCCCTTGACTGCGGTTGTAAACTTGCTTACTTTTCGACTTACAT
TTTTTATGAAGTTTAACTTGAAGAAATGATAAATGATTTTATAGACGTAG
AACAAAAAAAGGAATTTTTATGGATGACATCTCGCGAAACTGCGTTAGCG
ACAAGGAAGCCTTTTTTGTTTGTTTCGTCGAAAATATCATTATTTTTCAT
CTGATAAATTTTATGTTACAGCCTTCCGAACATGTGACCGCAAGATGTTC
GCCAAAGTCGGTTGTTACGCTCGTAACAAGGCTTTATTGCCCGATATGAT
TTTGAACGGTCGCGAAGTTACCGCTAAATATTTACCTGAAGATGGTTTGA
TTAGCTGGGAAGACTACAACAGTTACATTCACAGTTTAGCCTGTGAGTGC
GCTGAAAAAGCTAAGGAACAAGGCTACAAATATTTCGGTATTGGTTTCTA
TGGAGAATGCTTTGCCGGCAAAAACGTTGGATTGGCTGGTGTGTTGGCTA
AAACACAAATCTCAGATGTAAGTCTCTCTTTCTCAGATTTCTATACCTAG
TTAGCTCTCCCTAAAACAACCTTCAAGGCAGTAGTTATTTTTTGAATTAA
ACAAGGATTTGACCTTTGACCTACAGGGCGTTGGTCTAAAAAGCAGGGTA
GCCAATTGGGGTAGCCGCTTGGGGTAGCCAATTGGGCTAGGTTGTGGGGT
AGCCATGTATTTCACAGACCAGAGTAAAAAAATAAAAAATTTTTAGATGA
TGATCCTAATTGGAGCCAGGGGGAAACTTTGAAAAAAATATTGCTTTTTA
GACCAATCCCTTAAAGGAAAACCTTCTGTAGGACTTTTAAAGCTCAGATT
ATAACTGCCGAGCAAGGTCAGTCGCTCATAGGCATCAAGAGAAGTATCTT
TTCAGTTATTAAAATAACAAAATACTAACATTACTTACATAGAAATATAT
TTTACATAAAAAAACACACACAAAGACACCAAAAGTGACAACCTGAGGAC
CGACTTCTGGGATCAGTTGCAAAACCTTTCAGAAAACCGAACAATAACAA
CTGGTAACATTTCTTCTACTGTAGCTTTGCATCAGAGGTGACTACACTGC
ATGTGAGAAGGTGGAAGATGGTTCACACGAGTGTGTTGGAGGAGCTAATG
CTGAATACATTTACACCATCCAAGAACAAGCTGCTCAAGCTGAACAAAGT
AAGACACCCTCTGCACACAGACCCGTTGACACCCTCTGCACACATAGACT
GGAAAAATTGGCCAAAATATCGTACCCCGGTGAAAATATTTTAGTTTTTG
TCCCCGCTGAAAATAATCAAATAAACAAATAGTTGCTCCAAAAGATTGCT
GTTTTTTTTCATTGTGAATTTTCTAGCCTGAAGATAATACAATTCAAATT
CCCAGGCATAAAAACATGAGGAATATCAACCCCCATTGAGTTCCAGTCTG
TTTTTTTCCTTTTGCTAACCAAGATCCTATTAAAATCTGAGAAACTTGTT
CTAGCTCTGTTCATGATGTTCATTATCGGCTTGACACATTACCCGATAAA
AACATATAAAACATCGCACTTTTGATGTTTTTGAATTTGATCTATTATAA
GCTCCAATGATTCAAACATGGTTTTCTCTGTTCACACTTACTAGGAATAA
ACGGTGGTTATGGCAAATGGGCTGAATGGACCCAGTGTGACCAGGAATGT
GGTGAAGGAATGCAATTCCGTGAACGTGGTTGCAACAACCCAATCCCCTC
AGGTGGTGGTGACGATTGTGAAGCGTTAGGAGATGCTGCTCAATCAAGAA
AATGTATGCTCAAAGAATGCCCAGGTAAAACTAAATTGACCAAAAAACTT
CTCGCTTATTTAACCGACTGTATTCTGCTTGTAACTTTAATTTGAAAATT
GAGAGAAAAACACTTTATGTTGAAGCATACTCTACATATTAAATGTTTTT
GGGCATCATCATATTTGCTTCTGATTCTGCTACCCAATCTTGATCAAAGA
ATTTCCAAAGATGAGTTTTGATTTCTTTCAAAGCAAAGCTCGTTTCAAGA
GCAGTAGCTAATCATTACCCTTGAAGTTCATACATATATACGAGATTGTC
TTATCTTTATTAATCTATTTTCCTAGTTGACGGAGGATATTCCCGATGGA
GTGAATACGGAAAATGCAGCGCGTCGTGTGGAGGGGGTGTTATGAAGCGA
ACACGAACATGTACCAACCCTGAACCGTCCAATGGTGGTCAACAATGTGA
AGGCAAAGCTGAAGAAACACAAGCATGTGGAATGGATCCATGCCCAGGTA
TTTGGACTTATTATTATCAGAATACTTTGACACTCAGTCAAGTCGTTATC
TCAACCTCCCAAGGGTTCAAAAGAGGCTCGAGATTCGAGAGAATAGTTTT
GGCTGTGCGGATATAGTTTGAAGAGTGTGGGCTTTAAGCATATTCTTTCT
TTAACCTACACGAAGGTGAGACACACTTATTCTTAAGGATCTAGTGCAAT
CAAAATTATTTCCCTAAGTGGATGTCATTAATCACCCGGCACACTTCCAT
ATTCCCTTACAAAAATGATATCACCTACACCAGACCAGAGAAAAATTTAG
ATATGATAGGTCTGCAAATCAGACTAGTTTTCTCCTTACTGACTTGGATT
GCCTTTGAATATAACTGAAGCTTGACGACAAAAATAACGTTTTCTTTCTT
TCACAGTCGACGGTGGTTTCAGCCAATGGTCTAAATATGGTCAATGTACT
TTAACTTGTGGCGGAGGATTACGCGTTCGCGAAAGGTCATGCACCAAACC
CTCACCAGCACATGGAGGAAAAGATTGTGATGGGTTAACTCAAGAAACTG
AGAGCTGCAACTCACAATCATGCCCAGGTAAGTTCGTTTATAACCATTAA
AATTAAATCTTAAATCTAACTTGGTTTTCTTCATCAAGAAAAGAAGTGGT
CCCGAAACATTGCGTGAACGCAAAAATATCATAATATCAAAAAAGACATA
GCAAAGAAATCGAAAAAGTTTCATTACGCAACTGTACTTTAATCTGGAGA
ATTGTCCCGAAACGTTCTTCCGAAATCAAATAGAACACTATATCGAAAAC
GATACAAAACTGTAACGTCTGAGCATGGTCTGAATGTAAGAACTTTCAGC
TCAATATAATCCTTCTGATGTCACTTCTTTCTTTCAGTTGACGGAGTATG
GTCATCATGGGGTTCATATGGAGCATGCTCAAAAGATTGTGGTTATGGTA
TTGAAACACGCATGCGCACTTGTACAAATCCTGCACCGCAACACAATGGA
AAAGGATGTGAAGGCTCCACTAAAGACACAAGAGCTTGTTACAAAAAAGC
ATGCCCAGGTAATGAAGAAAATTTTTCTTTTCCCATCGTTCTTGACAATA
AGAAAATGTGCAGTCTAGAAATGAATAAAATCTTCAAAACTCAAATACTT
TTAACCCTTTAAGTGCCAATGACAAGGGCTATGTAGGAGAGCGAAGCCGT
CCTGTAATGCCCAGTTTGAGTTTGAATTGAATTGAATTGAATTGGGCTTC
ATGGTCAAGCAAAAAAAAAATCGAAAGTGAGTCTTTTCAGCGAGATTTTA
AGCTAAAAAATCAAAAAATGCAAAAATTTGACAAGAACCTCCAAATTTGG
CCCTGCTTTACTTGATTCTGTCTTCCAGTGAAGTAGTTTGAAGTTTTACA
ACTGGGCACCTTTCTATCATTCAGGCAGGTCCGCGCATCGGGCTTGACTG
CTTTAATTTCCCTTACCTTACCCCCCTTAGCCGCCGCCTACCCCGCCCTT
CCTAAATCGGTCGGTGCCAAAGGCGCCTAAAAGAAAGAGGAGACTGCAAT
CTATCCAACGAGCTATGAACAAGCTTCTAACTCCTTCTAGATAAGATAAG
CCTTTAAAGTTTGAACTAGCGATTTTCTTTAAAAAACTTAGAAAAAAATG
ACTGTGGCACTTAAAGGTTAACTGAAGGAGTACCGAAAAATCCCATTTCA
TTGGCATTCGATTCGTTGGCATCCCCATTCAATTTTCTCCTCTGCATTTT
TGTTGGATGGTCTTAATCCACCTTCCCATATCAAATCAGAGCATAAGGCG
GGCGTAAAATCGTCCTTTAATGGACGATTTAGATGAGCAAAGTCCGCAAC
TAGTAACATTGCATCTTTTCTCATAGTTAATGGTAAATGGTCAGCCTGGT
CTTCATACACCAGTTGCTCAAAGTCATGTAAAGGTGGTCAAAAGTCACGC
ACACGATCTTGTACCAACCCAGCACCAGCACACAACGGAAGATCGTGTTC
TGGATCGACCAAAGAAACAGTTGATTGTAACCAAAAAGTTAGATGCCCTT
GTAAGTGACTCCTTTATTATTGTCTCATATGGACCGGTGTTCATCAAATC
ATTGGACACTCTATACAAGTTTCTGATCATGAATTTGATAATATTCTGAG
ATCTCTCAGGTCCTAAGGGCAAAAACAGATTAATCGTTTTGTTACGCTTT
TCTGCCTTCCGTAATGAAATTTCTTGCCAAAGTAAAAAGACATAATGGGA
GACAAGAGCCAAACTTAATGACAACCCGCCCTGACAAACATCAAAAAATC
TAAGACTCCCTACATAAAATACCAAAATATCACTTAACTTGTAACTCCTA
TACGTCTATGTACTTCAGATTTTCAATACTTAAGCCCTTGCTTTCGACTC
CAAGAAATCGAAGTCCCCCAGATAAGTTTGGGCTTTTTTCCGCGCAAAGC
ATTGTGGGTAATTCTCGGGGGTCAAATCTGAGTTTTCACGTTTTAGAGCC
GATATCGTCTATTCCCTTTGAAGAAAGGTTACATATCAAAATGGGTGTTT
TACAGAGAAACCTCGCAATAAATTAAACTTTAGGGTTACCTGATGGGTCC
TGGTCCTGGGAAAATTCGAAATGTTTAATAAAAAAATAGAACACCAAGAC
TATCAGTATCAGTAGGGAATAGCTCATTTGGAAATTCAAAACATATCTTT
GAAAAAACATACGACCACTCATCTAGGTGCAATGAATACAGACTTACGTA
ATGTGAAAATAACTCAAATAGTGGATTATTTATTGATATGTTTTGTTCAG
TTACCCAGGGTATTAAATCCTTAATTGATCATGTAAATGAAATTTGAAAC
TAAAAGAAAGCTTTCAAAAAATTCTCAAATTATTTTACTTTATAAAGATC
AATGTTTGACAGTTTGTTTATTTTGGACCTGTTGCCTGCGAGGCAAGGAG
GTACCTCACTCCAGGCTCTTTTATGCCTTCCCAAAAGGAAGAATCTGAAT
AATTTAATAATTTTAAAGCTCAGTAACTCACGTGAGCTTTTGGGTTACTT
AAAAAATACCTTTTTGTATTTTAATAGGGTCCCCTACCCTGATATCAACC
ACAAACCGTACTACAAGTAGATAAATATATATAATAAACCTCTGTCTCAG
GGACCTGCTGAGAACATTTTAGTCGGTGGGAATAAAATACATCACCAATA
TAGATGGGAAATCTCGTACTTGATCAGATGATCAGAGTTTCGCAAATTTT
GCTTTTTTCCCCTTTTGATAATGGTGACAGAAGCTAGTGTCCTGTCACCG
TCATAATTCTAGACAATTGCCCTAAGATAATTGCCCCCGGACAATTACCC
CAGGAGAAATGCCCCAGACACCTGCCCCAAATCCCTAAGTCGAAGCACCA
TAGACATATAAACGGTTTTTTTTTACAAAGGTAATTTTAAAAGACGACGA
GGCTCAATTTTATTCAAAATTTAACTGAAAAATTAAAAACACAGGGGCCG
CAGCTTTACTTTGAAAGTGGTAGGGCCATGTTTTAGTGTCTGAGACAGGA
GTAATTTTGGAAAATTAGCCCTTCTAGACTGCCTAAAACAGGTCTTTTTC
AAGATTTTTACCCAGAATTTAGCTGAATCAATAAATTTTCTTTTTACTTT
AGCCCAGTTGCCCCCCCCCTCCCGCTGCCGCCGCAGCCCCTCTGTGCTAG
TATGAGAGTTTTGAAAAAGCAAAGAGAAATCCGATTTCAAGTCCCTTTTA
AGAATATTTATGCCTAAATCAGGAAACAATAAGAAAATAAATCTACATGC
TGATTGCACCACTCAATAAATTTCATCATTTTATTTAGACTACACTGCGT
ACCATATAAACCATGTCTGTGAAGGTGGAAACATGAGAATGTGGTGTACA
GATAAACATCAAGTTATCAAGCTATCTGAATACTGGTATGGTAGAACAAA
CACCAACACGTGTAAAAAGGGTATTAACTGGTTCTGGCATTGGAAAACCG
CGTGTAAAGGGGGCTCAAATAAAGTTCACGCCTCATGCCAAAATAAGAAT
TCGTGCACTGTCTACGCAAACAACAGCTGGATGGGCGGAGATCCATGTAA
AGGCACACCAAAATATTACTACGTTAAATTCAGATGTTATGGATAA Coding sequence (CDS) from alignment at sc0000304_pilon:386877..393622- >XLOC_040234 ID=XLOC_040234|Name=XLOC_040234|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3294bp|location=Sequence derived from alignment at sc0000304_pilon:386877..393622- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAACAGCAATCATTGTTTTGCTTGGTGTTATTGCTTGCGCCAGTGC
AGATGAAAACAGCAATCATTGTTTTGCTTGGTGTTATTGCTTGCGCCAGT
GCAGCCTTCCGAACATGTGACCGCAAGATGTTCGCCAAAGTCGGTTGTTA
CGCTCGTAACAAGGCTTTATTGCCCGATATGATTTTGAACGGTCGCGAAG
TTACCGCTAAATATTTACCTGAAGATGGTTTGATTAGCTGGGAAGACTAC
AACAGTTACATTCACAGTTTAGCCTGTGAGTGCGCTGAAAAAGCTAAGGA
ACAAGGCTACAAATATTTCGGTATTGGTTTCTATGGAGAATGCTTTGCCG
GCAAAAACGTTGGATTGGCTGGTGTGTTGGCTAAAACACAAATCTCAGAT
CCTTCCGAACATGTGACCGCAAGATGTTCGCCAAAGTCGGTTGTTACGCT
CGTAACAAGGCTTTATTGCCCGATATGATTTTGAACGGTCGCGAAGTTAC
CGCTAAATATTTACCTGAAGATGGTTTGATTAGCTGGGAAGACTACAACA
GTTACATTCACAGTTTAGCCTGTGAGTGCGCTGAAAAAGCTAAGGAACAA
GGCTACAAATATTTCGGTATTGGTTTCTATGGAGAATGCTTTGCCGGCAA
AAACGTTGGATTGGCTGGTGTGTTGGCTAAAACACAAATCTCAGATCTTT
GCATCAGAGGTGACTACACTGCATGTGAGAAGGTGGAAGATGGTTCACAC
GAGTGTGTTGGAGGAGCTAATGCTGAATACATTTACACCATCCAAGAACA
AGCTGCTCAAGCTGAACAAACTTTGCATCAGAGGTGACTACACTGCATGT
GAGAAGGTGGAAGATGGTTCACACGAGTGTGTTGGAGGAGCTAATGCTGA
ATACATTTACACCATCCAAGAACAAGCTGCTCAAGCTGAACAAAGAATAA
ACGGTGGTTATGGCAAATGGGCTGAATGGACCCAGTGTGACCAGGAATGT
GGTGAAGGAATGCAATTCCGTGAACGTGGTTGCAACAACCCAATCCCCTC
AGGTGGTGGTGACGATTGTGAAGCGTTAGGAGATGCTGCTCAATCAAGAA
AATGTATGCTCAAAGAATGCCCAGGAATAAACGGTGGTTATGGCAAATGG
GCTGAATGGACCCAGTGTGACCAGGAATGTGGTGAAGGAATGCAATTCCG
TGAACGTGGTTGCAACAACCCAATCCCCTCAGGTGGTGGTGACGATTGTG
AAGCGTTAGGAGATGCTGCTCAATCAAGAAAATGTATGCTCAAAGAATGC
CCAGTTGACGGAGGATATTCCCGATGGAGTGAATACGGAAAATGCAGCGC
GTCGTGTGGAGGGGGTGTTATGAAGCGAACACGAACATGTACCAACCCTG
AACCGTCCAATGGTGGTCAACAATGTGAAGGCAAAGCTGAAGAAACACAA
GCATGTGGAATGGATCCATGCCCAGTTGACGGAGGATATTCCCGATGGAG
TGAATACGGAAAATGCAGCGCGTCGTGTGGAGGGGGTGTTATGAAGCGAA
CACGAACATGTACCAACCCTGAACCGTCCAATGGTGGTCAACAATGTGAA
GGCAAAGCTGAAGAAACACAAGCATGTGGAATGGATCCATGCCCAGTCGA
CGGTGGTTTCAGCCAATGGTCTAAATATGGTCAATGTACTTTAACTTGTG
GCGGAGGATTACGCGTTCGCGAAAGGTCATGCACCAAACCCTCACCAGCA
CATGGAGGAAAAGATTGTGATGGGTTAACTCAAGAAACTGAGAGCTGCAA
CTCACAATCATGCCCAGTCGACGGTGGTTTCAGCCAATGGTCTAAATATG
GTCAATGTACTTTAACTTGTGGCGGAGGATTACGCGTTCGCGAAAGGTCA
TGCACCAAACCCTCACCAGCACATGGAGGAAAAGATTGTGATGGGTTAAC
TCAAGAAACTGAGAGCTGCAACTCACAATCATGCCCAGTTGACGGAGTAT
GGTCATCATGGGGTTCATATGGAGCATGCTCAAAAGATTGTGGTTATGGT
ATTGAAACACGCATGCGCACTTGTACAAATCCTGCACCGCAACACAATGG
AAAAGGATGTGAAGGCTCCACTAAAGACACAAGAGCTTGTTACAAAAAAG
CATGCCCAGTTGACGGAGTATGGTCATCATGGGGTTCATATGGAGCATGC
TCAAAAGATTGTGGTTATGGTATTGAAACACGCATGCGCACTTGTACAAA
TCCTGCACCGCAACACAATGGAAAAGGATGTGAAGGCTCCACTAAAGACA
CAAGAGCTTGTTACAAAAAAGCATGCCCAGTTAATGGTAAATGGTCAGCC
TGGTCTTCATACACCAGTTGCTCAAAGTCATGTAAAGGTGGTCAAAAGTC
ACGCACACGATCTTGTACCAACCCAGCACCAGCACACAACGGAAGATCGT
GTTCTGGATCGACCAAAGAAACAGTTGATTGTAACCAAAAAGTTAGATGC
CCTTTTAATGGTAAATGGTCAGCCTGGTCTTCATACACCAGTTGCTCAAA
GTCATGTAAAGGTGGTCAAAAGTCACGCACACGATCTTGTACCAACCCAG
CACCAGCACACAACGGAAGATCGTGTTCTGGATCGACCAAAGAAACAGTT
GATTGTAACCAAAAAGTTAGATGCCCTTACTACACTGCGTACCATATAAA
CCATGTCTGTGAAGGTGGAAACATGAGAATGTGGTGTACAGATAAACATC
AAGTTATCAAGCTATCTGAATACTGGTATGGTAGAACAAACACCAACACG
TGTAAAAAGGGTATTAACTGGTTCTGGCATTGGAAAACCGCGTGTAAAGG
GGGCTCAAATAAAGTTCACGCCTCATGCCAAAATAAGAATTCGTGCACTG
TCTACGCAAACAACAGCTGGATGGGCGGAGATCCATGTAAAGGCACACCA
AAATATTACTACGTTAAATTCAGATGTTATGGATAAACTACACTGCGTAC
CATATAAACCATGTCTGTGAAGGTGGAAACATGAGAATGTGGTGTACAGA
TAAACATCAAGTTATCAAGCTATCTGAATACTGGTATGGTAGAACAAACA
CCAACACGTGTAAAAAGGGTATTAACTGGTTCTGGCATTGGAAAACCGCG
TGTAAAGGGGGCTCAAATAAAGTTCACGCCTCATGCCAAAATAAGAATTC
GTGCACTGTCTACGCAAACAACAGCTGGATGGGCGGAGATCCATGTAAAG
GCACACCAAAATATTACTACGTTAAATTCAGATGTTATGGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304_pilon | genome | sc0000304_pilon:386877..393622 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1342-1647:307 |
| Aaloc | 1168-1338:2269 |
| Aaloc | 997-1164:3258 |
| Aaloc | 826-993:3739 |
| Aaloc | 655-822:4319 |
| Aaloc | 475-651:4801 |
| Aaloc | 349-471:5373 |
| Aaloc | 55-348:6224 |
| Aaloc | 1-51:6747 |
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