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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000304_pilon:398514..400776- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040233 ID=XLOC_040233|Name=XLOC_040233|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2263bp|location=Sequence derived from alignment at sc0000304_pilon:398514..400776- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGCAATCTGTTCCCACAAAACATTGGTTTCAAAATCCTTTGTCTA
CATCAAGAGTATCCAAAAGTCATCCAATATTAAAGTTCCACTGTCAGCCA
AAGAAGTTAACATCTTGAAAAAAACATGGCCACCTGTCAAAAATAATTGG
TTGAAAATATGTTTAGTGGCTTTTGAAAGGTATAATTTTGTGCTTTATAA
TATATTTTTCAGACCCAGGTTTACTCACGCTCCTCCCCTGGAATGGGAAC
GTTTGAGCCTTTAAGGTCTTAATTAAAGTTTCATACCCATCTTTGGATTC
TTAACAGTATCGTGGTGGCAAGTGGGCACCGGGTGAAAACTACCCCTCCC
CACAAAGAGGCCGGAAAACAAGGGGCTAAAAAAAGGTGCCTCTGATATGT
AATATCAGCGCCCCTTTGCTTTTTTACACCTCTGAATTAGCAGTTTTCAA
TCAAAAAAGCTCGCTTCGGTCGCGTAACTTACAAAGATATTTTACTTATA
AAAGGGGGCGCCGAAACCCCGAATTTCCAAAATTGCCATTCCAGTTTTGA
CCGACCCACTACGCTACCGATTTTAAGAGTTTTTGATACGATGTGGAAAC
TAAAGAATCGATGAGCTCTTGTTGGATGATTCTGTTTATCATTTTACCTA
TCTCCTCCATTTGCTTACACATCATTTTTAAACAAAAGAAAGATCAATTC
GCTTTCCCCCTTTCGTCCGGTAAAACGTAAAACCGCTTAAATTTCCTCAT
TCGACCAGATATAAAAAGCTTCCGTACCTGTAAAAATGAATATCTACACT
ACAAACACTATACCCACAACTGCGGTATATGTTTCGCTCCCTACCCGAAG
ACATACAATTCGAAGATCTTTTCAAAACAGATGCATTGAAAATGCATGTT
GATAAAGTTCGTGATGTTTTAGAATTGTTGATCAATAAGATTGATAATGT
TGAAGAACTTGTCAACACATTAGTAGACTTTGGAAGACAACATCATATGT
TAGGTGCTGAACAAAGATACGCAACTGTAAGTTTTTAATCTTTTGTTTTA
TTTTTCATCACAGTACGTAACTCAACTTAGCGACCGTAGTGCAGTGGTAG
AGCATCCGGTTACGGTGCGCAAGGTTGTGGGTTCAACCCTCAGTCTAATC
ATACCAAAGATTTCCAAAAAGGTAATTGATGCCTCTCTGTTTGGTATTCA
GTAATTAAGAGAAGGATCAAGGGTAAGTGGAGCAATCCAGGGAGAAAGAG
TGGTGCCCTCCCCTACCTTCGGGTAGTTAGCTATCGAAAGAGGAGCCTTC
GGATCGCCTCGGACTGCAGTCGCAGTCTTACTTACGTAACTCAAATCGAT
TTTCTAGCTAGAAATATTTTTTGCCTTGTGCTGATTCAACTGACGCTCTC
TAATTCGATTTTCAAGGGGAATCGGATTTTCATTGAATAAGGGAGCGTAT
CAAATAGTAGAGCGTCGTTTATGAGAGTGTCTTTCAATATTATCGAATAA
TGGAGTGTATCGAATAGTAGAACGTCGAATTAGAGAGCATCAACTGTAGC
TACAAGATCAAATTTTGTAAACTTCATTGTTCGGCAAGGTTTTTAGTCGT
TTTTGAATTATTTATACCATAAAACATTATTAGAGAAAATTTGCTTTAGA
TACCGCAAAAAATTACACTTTTTATCTTATATGTAGTCTAGCAAGCTAGA
CGACTAATTCAGACATAGTAGAAACAATGAAGCAAAAAGTAAAGGGGGGA
AAATTATACAAACTAAATACCGTAACAATTATCGTATTATCATATAACGC
CTATACTTCTGTAATACACGCATTATAAATGACTCCAGTCCATCTTAAAT
GAAACTTTTCCAAAGCGTCAGAATAACGCAAAGTCGTATTTAAAGCTCTT
TAATGATTCAAATATAAAAGTATGTTATGAAATTTCTTTTAGGCGTTGGC
AGCGAGTTTCCAATATGGCATTTGTATGATAATGGACGTAGATTCGTCCG
TCGAGAACGCGTGGGACAGTTTATTGCGTTTCGTCATGGATCTACTAAAG
CTCGGTATGCGAATGGAAAAAGAAGCACAAGAAAAAGAGAGTTTAAATAA
AGGCTACAACACAGAAGAACTATTAGAAAAAGCTCAAGATGGCGGAGAAG
CTTTGGATGAGAATGAGAATTCCGCTCCGATGCCGCTTGCTTTGATAAAC
GAAGATGATTCTACGAGTAGCGTAAGGACGTTTCATGTCGCTGAAGCGGA
TCCAGACGGCTGA Coding sequence (CDS) from alignment at sc0000304_pilon:398514..400776- >XLOC_040233 ID=XLOC_040233|Name=XLOC_040233|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1464bp|location=Sequence derived from alignment at sc0000304_pilon:398514..400776- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTGCAATCTGTTCCCACAAAACATTGGTTTCAAAATCCTTTGTCTA
CATCAAGAGTATCCAAAAGTCATCCAATATTAAAGTTCCACTGTCAGCCA
AAGAAGTTAACATCTTGAAAAAAACATGGCCACCTGTCAAAAATAATTGG
TTGAAAATATGTTTAGTGGCTTTTGAAAGGTATAATTTTATGGGTGCAAT
CTGTTCCCACAAAACATTGGTTTCAAAATCCTTTGTCTACATCAAGAGTA
TCCAAAAGTCATCCAATATTAAAGTTCCACTGTCAGCCAAAGAAGTTAAC
ATCTTGAAAAAAACATGGCCACCTGTCAAAAATAATTGGTTGAAAATATG
TTTAGTGGCTTTTGAAAGGTATAATTTTACACTATACCCACAACTGCGGT
ATATGTTTCGCTCCCTACCCGAAGACATACAATTCGAAGATCTTTTCAAA
ACAGATGCATTGAAAATGCATGTTGATAAAGTTCGTGATGTTTTAGAATT
GTTGATCAATAAGATTGATAATGTTGAAGAACTTGTCAACACATTAGTAG
ACTTTGGAAGACAACATCATATGTTAGGTGCTGAACAAAGATACGCAACT
ACACTATACCCACAACTGCGGTATATGTTTCGCTCCCTACCCGAAGACAT
ACAATTCGAAGATCTTTTCAAAACAGATGCATTGAAAATGCATGTTGATA
AAGTTCGTGATGTTTTAGAATTGTTGATCAATAAGATTGATAATGTTGAA
GAACTTGTCAACACATTAGTAGACTTTGGAAGACAACATCATATGTTAGG
TGCTGAACAAAGATACGCAACTGCGTTGGCAGCGAGTTTCCAATATGGCA
TTTGTATGATAATGGACGTAGATTCGTCCGTCGAGAACGCGTGGGACAGT
TTATTGCGTTTCGTCATGGATCTACTAAAGCTCGGTATGCGAATGGAAAA
AGAAGCACAAGAAAAAGAGAGTTTAAATAAAGGCTACAACACAGAAGAAC
TATTAGAAAAAGCTCAAGATGGCGGAGAAGCTTTGGATGAGAATGAGAAT
TCCGCTCCGATGCCGCTTGCTTTGATAAACGAAGATGATTCTACGAGTAG
CGTAAGGACGTTTCATGTCGCTGAAGCGGATCCAGACGGCTGAGCGTTGG
CAGCGAGTTTCCAATATGGCATTTGTATGATAATGGACGTAGATTCGTCC
GTCGAGAACGCGTGGGACAGTTTATTGCGTTTCGTCATGGATCTACTAAA
GCTCGGTATGCGAATGGAAAAAGAAGCACAAGAAAAAGAGAGTTTAAATA
AAGGCTACAACACAGAAGAACTATTAGAAAAAGCTCAAGATGGCGGAGAA
GCTTTGGATGAGAATGAGAATTCCGCTCCGATGCCGCTTGCTTTGATAAA
CGAAGATGATTCTACGAGTAGCGTAAGGACGTTTCATGTCGCTGAAGCGG
ATCCAGACGGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304_pilon | genome | sc0000304_pilon:398514..400776 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 409-729:322 |
| Aaloc | 187-408:1460 |
| Aaloc | 184-186:2078 |
| Aaloc | 1-183:2264 |
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