|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000240_pilon:489522..492345+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040210 ID=XLOC_040210|Name=XLOC_040210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2824bp|location=Sequence derived from alignment at sc0000240_pilon:489522..492345+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATGAAATTCAGAATGTTATGgaaattaccaaagaagaagaaga
gcaaaaaagcaaaaatgaaagtgatgaaaataaaccaaagCTTTCACGTC
ATGAGAGTTTGAAAGAATTTCTTGTAATGACGGATGAAAAAGGAGATAAA
ATAACTTTGGAGGATACTGGAATCGATGATTTGATTTCCAAAGAAACAGC
TGAACTAACAGATAATGAACGAATGTTTCTATATGAAAAAGCAATGTCTT
TTCGTGGCCTGGGAAGTAACAATCATGCTTTATTATGCTTTCTTGGTTGC
CTGAAAGGCTTGAAACCATCCTCAAAATCGAAATTTACAATGTTACCTCA
ATGTATGACTCATATTTCCGAGATTTACGCAACAGCTGGTGACTACCAAA
GAGCTGTTGAATTTATGCAAGGAACAAAACTTTATTATGAGACTGCTATT
ATTGAATCTGGTCTACAAGTAGATAAATATAAAGAATTGTCCAGTGAGAA
TTATTCTCCTTTGGACTTTGACCCTTGTTTAGATGAAGCAAAGAGAGCAA
ATGAGTATGAACGTTTAGCAAACTCATGTTTAGagcaacaaaaatttcaa
ctAGCTTTAGAATATTGTGGTAAAGCGACTAAATTAAGACAGAAGGCTTA
TGGAGATGAACATCCGTTGACAATCAAGAGTTTAGATTTGTTTACCTTGA
TCTATGCTGAAATGGGGAAAAGTCAATATTCCGAAGCAATGAATAAGGTT
GGAGATATTGTGAAACAGTATAAGATTGAATCGGAACAAGCTCAAAAGAA
AGCTGTCCAGGTATGAAACTTTGTTTGTctataaaattgtattttttata
caatacaccttttcgaccgtagccgccaattgccgcgcgggaattttttt
GGCCGTTTCACAACCCTAAAACACCAccttcgcacctaaagacaatagaa
aaaagtgtcaaaaaaggattaggtcaagtttagggtggtaaattaaataa
taaagtggcaggcacctgaccgcgcgactacggttgGTTGAATAATTGAA
TCTGCTACATGTTTCAATATCTTACCactttctgtttattttgtttgtGC
AAATTATATGGTATCAAAGCAAAAACTACCcaaaaaatctaattcgaaat
cATTGTATCTTATTGACTGGTAAATTGTTAtgaagataaatattttttaa
tttttcacattttctaaACAGGCTGATGCCTCAAGTGAGAAGGATAATAA
TGAAACAACAAAGAAAACTGAAGACAGGTAAGCCTAGCCTGGTTAAGcaa
gccagtttttacaaggtcAAGATACGACTGAAGCAATATAGCATTATCGg
cgctttaatgatttttatgatgtacgaaattttaaatttgccctcagtca
caacttaccatcagcaGATTttaccaagtgactgaatcaatctggattag
atttctaggctaaggAAGCCCAGGGGTACTGAAGCAAGTATAGTGCACCT
GTGAGCGACAAGGGTAGTTTTTAACCTTCTCAAGTCTGAAGTGATATTTC
CCACTTTTGAGTTCTTTAAAGGGTATTatacaaaaacaatgaaaattatg
aatCTCTTAAATCTTTcggaaattttctttcaaatttagtttttgtgtAT
CTGCAAATTGAGAACATTAACTTAAAAATCCTATTAACTGGTTTCAGTAT
ATTCTTTTCTAGCAACCAAGTTGCTAAGACTCGAGTCctgaaatttgtca
tttttttcattttctcataaagtaaaagctttttaaataatCTAAGACAA
ACGATAGCCCTTCACCCAATAAAGTATAAATATGGTaataatatcagggg
tggtccGAGCAGATTTTTCGGAAAATGAACTAGAGTGCTAAGCAACCCTG
ACCCGAAAAGTAGAGttgcttaaaaaaaaagtgtacataTATCTTGTAAA
TCTGGAAAGGTCTGTATTGGCTTTTGTTTTAGCTCATCTTGATAATTGTT
GTAAATTTCAGGTGTCTATTTTTGACACGATATTTTACGATGTCATAATG
CTGTGATTattacgagaataaaataaagtaataaaatctTAACACACCAT
CGAATTTCTGAAAGTTGGAGTTTTTAATTTCGGAAATAAATATCGGATTT
TGATGAAGGCTTGGGGAcatgagaagtttttttcgcgtttgtgcaatgca
acatgctccgtCCCaacaacctgaaacgctttctcgtttctccaccccat
ttttcttatcagcgtgtcttttgggtatttccctcactttttgtcccatg
aaacaaaaaaagaaaccacttttttcttgtgtgggtgggatggagcatgc
tgcattgcaccaacgcgaaaaagacttctcgtgtccccaagccttaagac
AATTCTTctgaatattttattttacaattttagtgATGATTCTACTGCTG
CTGGGGACATTAATCTAGATGGAACGAAAGGAGATCAAGATAAGGACAAT
GACGaaaataacatcgaaactaatgatcaaaatgaaaaaacagatggcaa
taaaaaacaacaagtaCATTTTGAAGAAAACCCAACTAACCAGGACAACA
CAGAGCAACATACCCCTGAAATTAGTTTGTTAAACGAAATCACAcctaaa
atgtttttcataGTTTTCCTCATTTCATCTTTATCGGCTGTCTTCGCAAC
AGTGTCATGGTGTATTTATACTGATTCTACGATATGCCCGACTCGAGGTT
ACTTTTATGCTAAAGCGAAGTACCTGTATTACTATTACTGGGTGACTACG
GACCCTGATGTTAATTTATATTGA Coding sequence (CDS) from alignment at sc0000240_pilon:489522..492345+ >XLOC_040210 ID=XLOC_040210|Name=XLOC_040210|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2514bp|location=Sequence derived from alignment at sc0000240_pilon:489522..492345+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGATGAAATTCAGAATGTTATGgaaattaccaaagaagaagaaga
gcaaaaaagcaaaaatgaaagtgatgaaaataaaccaaagCTTTCACGTC
ATGAGAGTTTGAAAGAATTTCTTGTAATGACGGATGAAAAAGGAGATAAA
ATAACTTTGGAGGATACTGGAATCGATGATTTGATTTCCAAAGAAACAGC
TGAACTAACAGATAATGAACGAATGTTTCTATATGAAAAAGCAATGTCTT
TTCGTGGCCTGGGAAGTAACAATCATGCTTTATTATGCTTTCTTGGTTGC
CTGAAAGGCTTGAAACCATCCTCAAAATCGAAATTTACAATGTTACCTCA
ATGTATGACTCATATTTCCGAGATTTACGCAACAGCTGGTGACTACCAAA
GAGCTGTTGAATTTATGCAAGGAACAAAACTTTATTATGAGACTGCTATT
ATTGAATCTGGTCTACAAGTAGATAAATATAAAGAATTGTCCAGTGAGAA
TTATTCTCCTTTGGACTTTGACCCTTGTTTAGATGAAGCAAAGAGAGCAA
ATGAGTATGAACGTTTAGCAAACTCATGTTTAGagcaacaaaaatttcaa
ctAGCTTTAGAATATTGTGGTAAAGCGACTAAATTAAGACAGAAGGCTTA
TGGAGATGAACATCCGTTGACAATCAAGAGTTTAGATTTGTTTACCTTGA
TCTATGCTGAAATGGGGAAAAGTCAATATTCCGAAGCAATGAATAAGGTT
GGAGATATTGTGAAACAGTATAAGATTGAATCGGAACAAGCTCAAAAGAA
AGCTGTCCAGATGGCTGATGAAATTCAGAATGTTATGgaaattaccaaag
aagaagaagagcaaaaaagcaaaaatgaaagtgatgaaaataaaccaaag
CTTTCACGTCATGAGAGTTTGAAAGAATTTCTTGTAATGACGGATGAAAA
AGGAGATAAAATAACTTTGGAGGATACTGGAATCGATGATTTGATTTCCA
AAGAAACAGCTGAACTAACAGATAATGAACGAATGTTTCTATATGAAAAA
GCAATGTCTTTTCGTGGCCTGGGAAGTAACAATCATGCTTTATTATGCTT
TCTTGGTTGCCTGAAAGGCTTGAAACCATCCTCAAAATCGAAATTTACAA
TGTTACCTCAATGTATGACTCATATTTCCGAGATTTACGCAACAGCTGGT
GACTACCAAAGAGCTGTTGAATTTATGCAAGGAACAAAACTTTATTATGA
GACTGCTATTATTGAATCTGGTCTACAAGTAGATAAATATAAAGAATTGT
CCAGTGAGAATTATTCTCCTTTGGACTTTGACCCTTGTTTAGATGAAGCA
AAGAGAGCAAATGAGTATGAACGTTTAGCAAACTCATGTTTAGagcaaca
aaaatttcaactAGCTTTAGAATATTGTGGTAAAGCGACTAAATTAAGAC
AGAAGGCTTATGGAGATGAACATCCGTTGACAATCAAGAGTTTAGATTTG
TTTACCTTGATCTATGCTGAAATGGGGAAAAGTCAATATTCCGAAGCAAT
GAATAAGGTTGGAGATATTGTGAAACAGTATAAGATTGAATCGGAACAAG
CTCAAAAGAAAGCTGTCCAGGCTGATGCCTCAAGTGAGAAGGATAATAAT
GAAACAACAAAGAAAACTGAAGACAGGCTGATGCCTCAAGTGAGAAGGAT
AATAATGAAACAACAAAGAAAACTGAAGACAGtgATGATTCTACTGCTGC
TGGGGACATTAATCTAGATGGAACGAAAGGAGATCAAGATAAGGACAATG
ACGaaaataacatcgaaactaatgatcaaaatgaaaaaacagatggcaat
aaaaaacaacaagtaCATTTTGAAGAAAACCCAACTAACCAGGACAACAC
AGAGCAACATACCCCTGAAATTAGTTTGTTAAACGAAATCACAcctaaaa
tgtttttcataGTTTTCCTCATTTCATCTTTATCGGCTGTCTTCGCAACA
GTGTCATGGTGTATTTATACTGATTCTACGATATGCCCGACTCGAGGTTA
CTTTTATGCTAAAGCGAAGTACCTGTATTACTATTACTGGGTGACTACGG
ACCCTGATGTTAATTTATATTGAtgATGATTCTACTGCTGCTGGGGACAT
TAATCTAGATGGAACGAAAGGAGATCAAGATAAGGACAATGACGaaaata
acatcgaaactaatgatcaaaatgaaaaaacagatggcaataaaaaacaa
caagtaCATTTTGAAGAAAACCCAACTAACCAGGACAACACAGAGCAACA
TACCCCTGAAATTAGTTTGTTAAACGAAATCACAcctaaaatgtttttca
taGTTTTCCTCATTTCATCTTTATCGGCTGTCTTCGCAACAGTGTCATGG
TGTATTTATACTGATTCTACGATATGCCCGACTCGAGGTTACTTTTATGC
TAAAGCGAAGTACCTGTATTACTATTACTGGGTGACTACGGACCCTGATG
TTAATTTATATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000240_pilon | genome | sc0000240_pilon:489522..492345 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 868-1257:2435 |
| Aaloc | 811-864:1222 |
| Aaloc | 1-810:1 |
|
