XLOC_040191.3 (mRNA) -

Overview
NameXLOC_040191.3
Unique NameXLOC_040191.3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000115_pilon:704251..704787+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040191.3 ID=XLOC_040191.3|Name=XLOC_040191.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=537bp|location=Sequence derived from alignment at sc0000115_pilon:704251..704787+ (Clytia hemisphaerica_ch_hm2_pilon)
TACGAggtaaaaactaaaactaaattaACCTCAATTAACAGTTTTATCGC
TAGACATTATGCAAATTCAGTGGCACCTCAAATTGAAAGCTCTCCTCCCA
TCTCTCAATCGAATCCCTCATTTTCTTCAAGCACGGGTGTGAAAGTCAAA
TTGCCGACCTtaaatatcaaaaagttttctggTGAACCCTCTGAATATCA
GTCATTTATCGAGTCCTTCACTGAAGCTATTGATAAGAACAATAGTATTC
CACCGATTCAAAAGATGAATTATTTGATCGGATTTGTAACGGGTGAGGCT
GAAAGTCTTTTAAAAGGCCTCCGCTTATCTGGAGACAATTACAAGAAAGC
TCTTGAACTTCTTAAAGAGAGGTTTggaaattctcaaattttgaaaactg
ttcACATGAACAGAATTATCGAACTTGAATCTGTTTGTGACATTTCTGAG
GTGAAAGAATTGAGAAAACTTTACGATTCTGTAGAAACAGAAATAAGAAA
CTTGGAATCTTTGAGCATGAAGCATGATGAGTATGGG

Coding sequence (CDS) from alignment at sc0000115_pilon:704251..704787+

>XLOC_040191.3 ID=XLOC_040191.3|Name=XLOC_040191.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1074bp|location=Sequence derived from alignment at sc0000115_pilon:704251..704787+ (Clytia hemisphaerica_ch_hm2_pilon)
TACGAggtaaaaactaaaactaaattaACCTCAATTAACAGTTTTATCGC
TAGACATTATGCAAATTCAGTGGCACCTCAAATTGAAAGCTCTCCTCCCA
TCTCTCAATCGAATCCCTCATTTTCTTCAAGCACGGGTGTGAAAGTCAAA
TTGCCGACCTtaaatatcaaaaagttttctggTGAACCCTCTGAATATCA
GTCATTTATCGAGTCCTTCACTGAAGCTATTGATAAGAACAATAGTATTC
CACCGATTCAAAAGATGAATTATTTGATCGGATTTGTAACGGGTGAGGCT
GAAAGTCTTTTAAAAGGCCTCCGCTTATCTGGAGACAATTACAAGAAAGC
TCTTGAACTTCTTAAAGAGAGGTTTggaaattctcaaattttgaaaactg
ttcACATGAACAGAATTATCGAACTTGAATCTGTTTGTGACATTTCTGAG
GTGAAAGAATTGAGAAAACTTTACGATTCTGTAGAAACAGAAATAAGAAA
CTTGGAATCTTTGAGCATGAAGCATGATGAGTATGGGTACGAggtaaaaa
ctaaaactaaattaACCTCAATTAACAGTTTTATCGCTAGACATTATGCA
AATTCAGTGGCACCTCAAATTGAAAGCTCTCCTCCCATCTCTCAATCGAA
TCCCTCATTTTCTTCAAGCACGGGTGTGAAAGTCAAATTGCCGACCTtaa
atatcaaaaagttttctggTGAACCCTCTGAATATCAGTCATTTATCGAG
TCCTTCACTGAAGCTATTGATAAGAACAATAGTATTCCACCGATTCAAAA
GATGAATTATTTGATCGGATTTGTAACGGGTGAGGCTGAAAGTCTTTTAA
AAGGCCTCCGCTTATCTGGAGACAATTACAAGAAAGCTCTTGAACTTCTT
AAAGAGAGGTTTggaaattctcaaattttgaaaactgttcACATGAACAG
AATTATCGAACTTGAATCTGTTTGTGACATTTCTGAGGTGAAAGAATTGA
GAAAACTTTACGATTCTGTAGAAACAGAAATAAGAAACTTGGAATCTTTG
AGCATGAAGCATGATGAGTATGGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040191.3XLOC_040191.3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000115_pilongenomesc0000115_pilon:704251..704787 +
Properties
Property NameValue
Aaloc1-537:1