XLOC_040188.4 (mRNA) -

Overview
NameXLOC_040188.4
Unique NameXLOC_040188.4
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000250_pilon:20549..21391+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040188.4 ID=XLOC_040188.4|Name=XLOC_040188.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=843bp|location=Sequence derived from alignment at sc0000250_pilon:20549..21391+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCTAAACGCGCGGGCCGCGGCGTGCAGCACCGCCCAGTAACACG TGGTATATTGACACAGCACGCCCTTTGGCAAGAAGATCGCTTGAAACTCC AGAAAATCGTTAAAGAAAAGATTGCTAAAGTAAAGGCTATGTTAGAGATC AATTCAGAAGATGTCGAAGAAGGTTATGCAGAGttagaaagatatttcaa aCAGTTGCTAGTGGCTCACACAAAATGTCAGATGTTGTTAGAACATGACG AACCGAAGTATTCTGACTTGGTCGAAAAACTAGACAAATCAGTTCATCTC ATCAAGAGAAGAATCATTGAAAGATCGTTGAATGGATCTGTTGGTCCCAG TAGTCAAGAACCAAGAACTCCACAGAACTCCACAGAACTTAGAACTCAAC AAGAACAAGTCGAATCAAGAAAGCTAGAATCTGAGGCAGGTGCTATCAAG AACGCTCATCTGATGGAGTTAGCCAGACTCAAACAGCTAAAGTTAGAGCA ACAGTATATCACGAAAAAGAGGCAAGCTCAAATCGAGGCAGAATTGATCG ATAATGAACTCCAAATTGCCATTGCTCAGTCGAAGCTAGAAGTATTCTCC AAAACAGATCCATTAGTAGACATACCTTACGACATTCCATCAAATGAAAG CTATGTCAATGATTATGTTGCCAAGCACAGTACTCCTGCTGTCGATGCTC CAATCAAGGTGCCACACCCTCCATCTCTGCCAAAATCTTACGCTGTTTCT TCTGCCAGTCTATCTTTCAGAAGACGATTGTCACCACTGAATAATGATGC TTTGTCTGTAGCTCCATCTCAGAGTATCTCCGTCGCTCCACCT

Coding sequence (CDS) from alignment at sc0000250_pilon:20549..21391+

>XLOC_040188.4 ID=XLOC_040188.4|Name=XLOC_040188.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1686bp|location=Sequence derived from alignment at sc0000250_pilon:20549..21391+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGTCTAAACGCGCGGGCCGCGGCGTGCAGCACCGCCCAGTAACACG
TGGTATATTGACACAGCACGCCCTTTGGCAAGAAGATCGCTTGAAACTCC
AGAAAATCGTTAAAGAAAAGATTGCTAAAGTAAAGGCTATGTTAGAGATC
AATTCAGAAGATGTCGAAGAAGGTTATGCAGAGttagaaagatatttcaa
aCAGTTGCTAGTGGCTCACACAAAATGTCAGATGTTGTTAGAACATGACG
AACCGAAGTATTCTGACTTGGTCGAAAAACTAGACAAATCAGTTCATCTC
ATCAAGAGAAGAATCATTGAAAGATCGTTGAATGGATCTGTTGGTCCCAG
TAGTCAAGAACCAAGAACTCCACAGAACTCCACAGAACTTAGAACTCAAC
AAGAACAAGTCGAATCAAGAAAGCTAGAATCTGAGGCAGGTGCTATCAAG
AACGCTCATCTGATGGAGTTAGCCAGACTCAAACAGCTAAAGTTAGAGCA
ACAGTATATCACGAAAAAGAGGCAAGCTCAAATCGAGGCAGAATTGATCG
ATAATGAACTCCAAATTGCCATTGCTCAGTCGAAGCTAGAAGTATTCTCC
AAAACAGATCCATTAGTAGACATACCTTACGACATTCCATCAAATGAAAG
CTATGTCAATGATTATGTTGCCAAGCACAGTACTCCTGCTGTCGATGCTC
CAATCAAGGTGCCACACCCTCCATCTCTGCCAAAATCTTACGCTGTTTCT
TCTGCCAGTCTATCTTTCAGAAGACGATTGTCACCACTGAATAATGATGC
TTTGTCTGTAGCTCCATCTCAGAGTATCTCCGTCGCTCCACCTATGGCGT
CTAAACGCGCGGGCCGCGGCGTGCAGCACCGCCCAGTAACACGTGGTATA
TTGACACAGCACGCCCTTTGGCAAGAAGATCGCTTGAAACTCCAGAAAAT
CGTTAAAGAAAAGATTGCTAAAGTAAAGGCTATGTTAGAGATCAATTCAG
AAGATGTCGAAGAAGGTTATGCAGAGttagaaagatatttcaaaCAGTTG
CTAGTGGCTCACACAAAATGTCAGATGTTGTTAGAACATGACGAACCGAA
GTATTCTGACTTGGTCGAAAAACTAGACAAATCAGTTCATCTCATCAAGA
GAAGAATCATTGAAAGATCGTTGAATGGATCTGTTGGTCCCAGTAGTCAA
GAACCAAGAACTCCACAGAACTCCACAGAACTTAGAACTCAACAAGAACA
AGTCGAATCAAGAAAGCTAGAATCTGAGGCAGGTGCTATCAAGAACGCTC
ATCTGATGGAGTTAGCCAGACTCAAACAGCTAAAGTTAGAGCAACAGTAT
ATCACGAAAAAGAGGCAAGCTCAAATCGAGGCAGAATTGATCGATAATGA
ACTCCAAATTGCCATTGCTCAGTCGAAGCTAGAAGTATTCTCCAAAACAG
ATCCATTAGTAGACATACCTTACGACATTCCATCAAATGAAAGCTATGTC
AATGATTATGTTGCCAAGCACAGTACTCCTGCTGTCGATGCTCCAATCAA
GGTGCCACACCCTCCATCTCTGCCAAAATCTTACGCTGTTTCTTCTGCCA
GTCTATCTTTCAGAAGACGATTGTCACCACTGAATAATGATGCTTTGTCT
GTAGCTCCATCTCAGAGTATCTCCGTCGCTCCACCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040188.4XLOC_040188.4-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000250_pilongenomesc0000250_pilon:20549..21391 +
Properties
Property NameValue
Aaloc1-843:1