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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000012_pilon:2687752..2693521- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040173 ID=XLOC_040173|Name=XLOC_040173|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5770bp|location=Sequence derived from alignment at sc0000012_pilon:2687752..2693521- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGCATTTGCAAAGGCGATTTGTCACCTCAAGAACGACATGTATACC
GAGCCTTAAAAAGACATTCACTAAGACCCTGTCTACACGTACAGAGTTTA
CGCATCGAACTGAAGAGAATGTGATTCGTGGAAATAAATCCTTGGAATAT
CCAGTCGAAGATTGCTTCACTTTTTTCAGCAAACGTTTTGAACAATTCGG
CGAGCGCGTTGCTATGGTAAGAGACGTTTTTTTTTTATTTATTTGCAGAC
TCGGAATTTTTTCAGTGTATGTTTAGGGTAATTTGATGACCGTGTTGCGA
TGGTAAGAAACTTTTTCATTGATTAGTTTTTGGCAGACTCGAAAAAGTTA
TTGATTATACTGTATTAAGTATTGGTTAATTCGATAAAGCAAATTTTGTC
ATCGGTGCAAATCAAAAGTTTTCTTCGGGAGGAATGATATCACAGATGAA
CAACAAGTACACCCCTTTAAAAAGAGTTCCAAACAGCATGGTTGAGCCTC
GTCTTGATGAAGAAAATTATATTTTTTGTCATTTTCAGGTTGATGGTGTA
ACAGGTACTGAATTAACATTTTCTCAACTAGTTCAGAATTCTCGAAAACT
GGGTTCGTATTTTCATGAAAAGAATTTCAAATTGAGAGATCGGGTTTCAA
TTTTTCTTCCAACGTGTACCAAATACTCTTACTCTATGCTTGGGGCGTTT
GCAAACGGCATGGCGGTTACAACTATACACCCCGCCTTCACAGCCCATGA
GATGCATAATCAAATCAAAACATCAACGCCCAAAGTTGTGATCACAAATG
CACATTTATTAGATACCGCCCGTCAAGCTTCAGAAAACAGTTCCATAGAA
ACAATGATATGTTTAGACGATACGTCAATCTCCGACAGCGGCGTCGTCAA
CATGTCGGATATCTTACAAAACGGCGACGAAAATTTCTCAACTGATCTCT
CAGCCATCAATCCTGAAAAAGACATTGCTTTTATCTTATACTCAAGCGGC
ACAACAGGGCTCCCGAAGGGCGTCATAATCAGTCATTTTAGTATGATAAA
TTGTTTACTCCAGGTCCGGGAGTTTTTTGGAGAAAACATGCCGGATAACG
TATTAGCGGCCATCCCGGTATATCACATGTACGGAATGGTACTTTTTCTC
TTTGTTAACCCTTACCATGGCAACAGGGTATACACATTACCGAAGTTCGA
CCCAGTTCAGTTCTTGTCAAGCATACAGAATTATAAGGTATTGTTTTTGT
CATAAAGTGTGCCTACAATCCTGTTGTTTTCTTCTGACGTTGATAAAGAC
TATTTTCAGACGTTACAGTTTTGTATCGTTCCGAAACGAAACGGTTTCGA
AACTAGTGTGAACGTCAAAATTCGAAACATCAAAAAAGAAGACGTTACAA
AGTAAAACAGATCGAAACGGCTTCGCTCCACTATTTTTATCGGAACGGAA
CTGCTCCGTTTTCTTGCTCCGAAACGTTCCGGAACTAATATGAACACTCT
CGATCCGTAACAGAAACCATACCAGGAACGATACAAAACAGTAACGTGTG
AACATGGATAAAATCTAATTCTGGTAATGTTCCAATCAGATCCAAAGATT
TGCATTATCGATCACAAGATGATAGGGCGTACAAGGCGTCCATCTCCTCA
TTCTAAACTTACACAAATTGACATACTGGAATCATATAGGTCAGCACCGA
TCACCACTATTTTAAAGGGGACCTTTGAATCGAACATCACCTTTAAACTA
ACCCCAGACCGCCATAGACGACTTGTCACCAATATCATCTGCGTCTAGGC
TAAAAATGTTTATAAAATCTAAAACATATCCCAGGTAAAAGATTTACGTA
AATCTAAAATCGCTAGCGAAAATCAAAGCGCTGCATAGAAAGGCTTCGGA
CACATACGGCTATTAAGCAGTTATTGGACAAAGTCGAATCCAATATGCAA
AAAATTTGGGCGTGCGAGAAAAGATATTGGACGAGGCTCGTAATATAGAA
GTACATGTTTAAAAATATCAAGTGACCCCATATCACTGAATTCATAGTGA
ATTCATAACTTACCCACATTATCGATTTCCATTAGATCGGTCGTATATGT
ATCGCACCACCTATCCTGCTGTTTCTCACTAAAAGCCCGTTGGTTGATCA
GTATGACATGTCCAGTCTCAAGTCTATTATCGTTGGAGCAGCGCCTGTTG
ATGAACAGCTTTCACATGCTTTTAATGAAAGGTTCCCTTGGATAACCTTG
CAGCAATGTAAGTTTATGCTTCCTCCAATGGAAAATAAAAGCACACTGAA
GTATTTGAATTCAACTCGAAAGGAAGCGTTCACTTTTTCTGAATTTTCCT
GAGGGAAATTTCAAGCCAGATTATCATACCGATGGCCTAGCACAAAAAAT
TTAAAAATTTCCTTCTGACAGGCTAAAGCTCTGAAAGTTGCCAAAACTTC
AGATTTATAAAGTTTTGCTACGGAAGAATTGTCCGCTAATTCAGAGCTTT
GATGTGGACGGCCGCTACTCCGCTATCCAAATATTAGATCGGATACAAGT
AGTTGATGAATTGTAATTCTCTTTCAGGTTATGGGATGACAGAAGCTGGT
TTCGCCACGCTCCAGGCTAATGATGCTTCATTTAACAGTGCAGGATCAGT
AGGTCAAATCTTGGCTGACGGTGAATGCAAGGTACGGGAAGAAACAAAGA
AATTATAGTTTACTTTCTTCTTACTTAAAATCGCGCTACCTTACAATCGT
GTCGAAATATATTGAGATTGTTTTGACATTTGAAAGTCTTCAAAATTCAA
AGTTCTTTATTTCATCGGAATTTTCTTACGAGTCGTTTAATGGATTCCAG
GAAATACTTTCAGCCTTTTTGGAACATTTTTGAGCTTCTCGATCCTGAAA
TCCTAAGGTCATCGTAGGTGGTGGTAAGTATTAATTCTAATGTTAAAACT
TTCACTAGTGTACATTGAAATTTCATCCACCTTAGAAACTACATATTTTA
AATTCTATCTCCCCTAGGAGAGAAACGATAGAATCTCTGCCGTAAATAGA
AAAAAAACTTAATTCCAATCGATTGAAATCAAATGCATGGAAATGGGGTT
TCCCAGTATCAACAGTCTCAAAACTACATCTATTTCAGGAGCATTGAAAA
CACCTCTTGCCCTATAGACATCTTTGTGATCTTCTTTCTAGATAATATCT
CTAGGAACAGTCGATATATTCTTTAATTTTCCTTTTAGATAGTATCTCTA
ACGACAGGCGAATTTTTGGGTCCATATGAACAAGGTGAAGTCTACCTGAG
AGGAGCACAGCAGATGTTAGGTGAGCAATCCGTAAAAATTCATTCAGAAG
ATCATCTTTTTCAGTGGGGAGTATATTTCTAGTTTGAATGTATTTTTAAA
GAAGAATCAAACTTTGAATAATTTTACAGACGTGTAAGGTCCTTGGCCAA
ACTATGACCTTGGTGAGTGCTAAAAGCCAGTTGCTGTAAGTTTACAATAG
GAATTAGAATTTTAGACAGGGTACCTGAAAGGAAAAAATTCTGACAAATT
TAGCTGAAATCCGCCAAATTAAGTCCGCCGAATTAAAATTCTTTTTGTCC
CATCACGTCAGTGACACAAAGAGTGTAAAAAATATTTCAACCAATTAACT
GATTTCTCTCCCTTTCAAATTATTTTCTTTAAACTTATCAGGTTATTTAA
ACAACGAGAAGGCAACAACAGAAACCATTTTGGAAGACGGTTGGCTACGC
TCTGGTGATTTAGGTTACTATGACGACGAGAATAATTTATTTGTCATCGA
CCGTTTGAAAGAGTTGATCAAATATAAAGGTTTCCAGGTATGAGACTGAC
GGACGAATAGGTCATTATTATTTCACCGGTCAATCATTAGAATCGATATT
TTACGTTTACTCAAGAGAATATCATGGTCTGGCATAACAGACTTGACTAT
CTATCTATATGTACAAAAAGTTTAATTTTCGAGATGAGATGATTTTTGAG
ATAAGGGTATTTTTAGTTTTAGACCATTTAAAGTGGTAATTTTTCATTCT
TTGGGCTTAAACCAGTCTATATTATCCCATTTACTATCCAAAGGGCTCTA
CTCGGCTACCGTGAAAAGCACAGGTCGAAATCATATATCGACGCTGTGCC
GACCAATCCAGATTCTATTCAGCACGTAATCAACGCAGAGAAAAGTAACC
ATGACGACCATCCAAGATCTTGGATGAAGTTGATATTTTTATTCCCATCG
TTGAAAACACAACTCAAAAATGTCACCATTGCTTTTTAAAAAGAGTCAGT
GATAGAGAATCATAATGTAAAGTCTGTCTATTATTTCGATTCAATAGACC
TTATCGGAGTTTTTGATTTTTCTAAAAAGGGGTTCATTGTGGGATTGTTT
CGAGTGTATTACAATAGAATTCCCTCGAGGAGTTCCTAAAAGATTTCTAT
TGTAACACACTCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATA
AAAAGCTCCGATAAGGTCTATTAAAGTGACATTTCCATAATCAAAAGTTT
AGTAATTACTATTATACATTTGGGAATCATGTACAAGATTTCTTATGAAA
TAAACTCATTTCAATTACATTTGGAGGTTTCTGGGGAATTTGTAAATAGT
AAACTGCATGCTGATACAGTCTGCTAGACATTAATATGCTCTTCATCTTT
GATTTTCTCTACAGTGATTAGATTGACACATGCGCGATAGAACTTCTATT
ATTGGTCTTCAGAGGTTGTCACCCTCTGATACTCAGGGTACTCCTCGGCG
GATGCGATGCCGGGTGACGGCTAGTACTATTCTAATGTTTTAACCAAAAT
TTTGAGGGAACACTTAATACCTAGAAATCAAAACAATCAAACCCAGGTTC
TTTAATTGATGACCAGGTATACATGTTTTTTTTTTTATAAGCAAGTGTAT
GCCCCTTGGTCAGGCTCGTGTATGCTTAAGTTCTCAAAGCATCCAGGCAT
AGTTTATGCTTATTATATGCTTAAGAATTATGCTTATATTCACCCCGAGC
CAAGTTTTTTAATGAAATTTCAGAAATTTTGTAAAAAATTTGTTCAGATT
TTTGGAGCAGTGGAATGTAGCTAGCCGTGGAATGTCTAATTTTTTACTTG
ACCTCTACCAAACCAGTAAAAAATGAAACAAAAAACAGATAAAAATTACC
ACTTGAAAAATATTTTAGGCTGACATATATGCTCATGTTATGCTTAGGAA
TTCCGCAAATCTGAGCCTTCATATGCTTATAAGCGTTATGCTTATAAAAA
AAAAACATGTACGGGATACGGGATGGTGAGCATTATAGAGCCAAAGAATA
GAACATGATACCTTTGTAACCATTGCGGTCGCCGGATGAGAAAGCGAAGT
GATCCACAATATGTTGTACAATATGTTCTGGAAAATAAAAAAAAAATTCA
CAGTTTCAATGTTATTTCTGTTTATTTAGGTTGCACCTGCCGAGCTGGAA
GATTTATTGATTTCTCACGAAAACATTGTGGATAGTTGCGTGATTGGCGT
CCCATGCGAAAGAGCTGGAGAAGTACCACGCGCCTATATCGTCAAAAAGC
CTGGTAGTGATTTAACAGAAGATGAAGTGAAAGATTTTGTAGGTGAACGA
TTTTCTGATCATAAACATCTCCGTGGTGGAGTGCAATTCGTAGAACAATT
ACCGAAATCGGCATCAGGAAAACTCCTTCGTAGAGTGCTCAGAGATCAAT
ATTTGGAGGAGAGGGAGTGA Coding sequence (CDS) from alignment at sc0000012_pilon:2687752..2693521- >XLOC_040173 ID=XLOC_040173|Name=XLOC_040173|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3420bp|location=Sequence derived from alignment at sc0000012_pilon:2687752..2693521- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGCATTTGCAAAGGCGATTTGTCACCTCAAGAACGACATGTATACC
GAGCCTTAAAAAGACATTCACTAAGACCCTGTCTACACGTACAGAGTTTA
CGCATCGAACTGAAGAGAATGTGATTCGTGGAAATAAATCCTTGGAATAT
CCAGTCGAAGATTGCTTCACTTTTTTCAGCAAACGTTTTGAACAATTCGG
CGAGCGCGTTGCTATGATGTTGCATTTGCAAAGGCGATTTGTCACCTCAA
GAACGACATGTATACCGAGCCTTAAAAAGACATTCACTAAGACCCTGTCT
ACACGTACAGAGTTTACGCATCGAACTGAAGAGAATGTGATTCGTGGAAA
TAAATCCTTGGAATATCCAGTCGAAGATTGCTTCACTTTTTTCAGCAAAC
GTTTTGAACAATTCGGCGAGCGCGTTGCTATGGTTGATGGTGTAACAGGT
ACTGAATTAACATTTTCTCAACTAGTTCAGAATTCTCGAAAACTGGGTTC
GTATTTTCATGAAAAGAATTTCAAATTGAGAGATCGGGTTTCAATTTTTC
TTCCAACGTGTACCAAATACTCTTACTCTATGCTTGGGGCGTTTGCAAAC
GGCATGGCGGTTACAACTATACACCCCGCCTTCACAGCCCATGAGATGCA
TAATCAAATCAAAACATCAACGCCCAAAGTTGTGATCACAAATGCACATT
TATTAGATACCGCCCGTCAAGCTTCAGAAAACAGTTCCATAGAAACAATG
ATATGTTTAGACGATACGTCAATCTCCGACAGCGGCGTCGTCAACATGTC
GGATATCTTACAAAACGGCGACGAAAATTTCTCAACTGATCTCTCAGCCA
TCAATCCTGAAAAAGACATTGCTTTTATCTTATACTCAAGCGGCACAACA
GGGCTCCCGAAGGGCGTCATAATCAGTCATTTTAGTATGATAAATTGTTT
ACTCCAGGTCCGGGAGTTTTTTGGAGAAAACATGCCGGATAACGTATTAG
CGGCCATCCCGGTATATCACATGTACGGAATGGTACTTTTTCTCTTTGTT
AACCCTTACCATGGCAACAGGGTATACACATTACCGAAGTTCGACCCAGT
TCAGTTCTTGTCAAGCATACAGAATTATAAGGTTGATGGTGTAACAGGTA
CTGAATTAACATTTTCTCAACTAGTTCAGAATTCTCGAAAACTGGGTTCG
TATTTTCATGAAAAGAATTTCAAATTGAGAGATCGGGTTTCAATTTTTCT
TCCAACGTGTACCAAATACTCTTACTCTATGCTTGGGGCGTTTGCAAACG
GCATGGCGGTTACAACTATACACCCCGCCTTCACAGCCCATGAGATGCAT
AATCAAATCAAAACATCAACGCCCAAAGTTGTGATCACAAATGCACATTT
ATTAGATACCGCCCGTCAAGCTTCAGAAAACAGTTCCATAGAAACAATGA
TATGTTTAGACGATACGTCAATCTCCGACAGCGGCGTCGTCAACATGTCG
GATATCTTACAAAACGGCGACGAAAATTTCTCAACTGATCTCTCAGCCAT
CAATCCTGAAAAAGACATTGCTTTTATCTTATACTCAAGCGGCACAACAG
GGCTCCCGAAGGGCGTCATAATCAGTCATTTTAGTATGATAAATTGTTTA
CTCCAGGTCCGGGAGTTTTTTGGAGAAAACATGCCGGATAACGTATTAGC
GGCCATCCCGGTATATCACATGTACGGAATGGTACTTTTTCTCTTTGTTA
ACCCTTACCATGGCAACAGGGTATACACATTACCGAAGTTCGACCCAGTT
CAGTTCTTGTCAAGCATACAGAATTATAAGATCGGTCGTATATGTATCGC
ACCACCTATCCTGCTGTTTCTCACTAAAAGCCCGTTGGTTGATCAGTATG
ACATGTCCAGTCTCAAGTCTATTATCGTTGGAGCAGCGCCTGTTGATGAA
CAGCTTTCACATGCTTTTAATGAAAGGTTCCCTTGGATAACCTTGCAGCA
ATATCGGTCGTATATGTATCGCACCACCTATCCTGCTGTTTCTCACTAAA
AGCCCGTTGGTTGATCAGTATGACATGTCCAGTCTCAAGTCTATTATCGT
TGGAGCAGCGCCTGTTGATGAACAGCTTTCACATGCTTTTAATGAAAGGT
TCCCTTGGATAACCTTGCAGCAATGTTATGGGATGACAGAAGCTGGTTTC
GCCACGCTCCAGGCTAATGATGCTTCATTTAACAGTGCAGGATCAGTAGG
TCAAATCTTGGCTGACGGTGAATGCAAGGTTATGGGATGACAGAAGCTGG
TTTCGCCACGCTCCAGGCTAATGATGCTTCATTTAACAGTGCAGGATCAG
TAGGTCAAATCTTGGCTGACGGTGAATGCAAGATAGTATCTCTAACGACA
GGCGAATTTTTGGGTCCATATGAACAAGGTGAAGTCTACCTGAGAGGAGC
ACAGCAGATGTTAGATAGTATCTCTAACGACAGGCGAATTTTTGGGTCCA
TATGAACAAGGTGAAGTCTACCTGAGAGGAGCACAGCAGATGTTAGGTTA
TTTAAACAACGAGAAGGCAACAACAGAAACCATTTTGGAAGACGGTTGGC
TACGCTCTGGTGATTTAGGTTACTATGACGACGAGAATAATTTATTTGTC
ATCGACCGTTTGAAAGAGTTGATCAAATATAAAGGTTTCCAGGTTATTTA
AACAACGAGAAGGCAACAACAGAAACCATTTTGGAAGACGGTTGGCTACG
CTCTGGTGATTTAGGTTACTATGACGACGAGAATAATTTATTTGTCATCG
ACCGTTTGAAAGAGTTGATCAAATATAAAGGTTTCCAGGTTGCACCTGCC
GAGCTGGAAGATTTATTGATTTCTCACGAAAACATTGTGGATAGTTGCGT
GATTGGCGTCCCATGCGAAAGAGCTGGAGAAGTACCACGCGCCTATATCG
TCAAAAAGCCTGGTAGTGATTTAACAGAAGATGAAGTGAAAGATTTTGTA
GGTGAACGATTTTCTGATCATAAACATCTCCGTGGTGGAGTGCAATTCGT
AGAACAATTACCGAAATCGGCATCAGGAAAACTCCTTCGTAGAGTGCTCA
GAGATCAATATTTGGAGGAGAGGGAGTGAGTTGCACCTGCCGAGCTGGAA
GATTTATTGATTTCTCACGAAAACATTGTGGATAGTTGCGTGATTGGCGT
CCCATGCGAAAGAGCTGGAGAAGTACCACGCGCCTATATCGTCAAAAAGC
CTGGTAGTGATTTAACAGAAGATGAAGTGAAAGATTTTGTAGGTGAACGA
TTTTCTGATCATAAACATCTCCGTGGTGGAGTGCAATTCGTAGAACAATT
ACCGAAATCGGCATCAGGAAAACTCCTTCGTAGAGTGCTCAGAGATCAAT
ATTTGGAGGAGAGGGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012_pilon | genome | sc0000012_pilon:2687752..2693521 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1420-1710:292 |
| Aaloc | 1276-1419:2078 |
| Aaloc | 1192-1272:2533 |
| Aaloc | 1090-1191:3192 |
| Aaloc | 916-1086:3686 |
| Aaloc | 217-915:5233 |
| Aaloc | 1-216:5771 |
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