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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000012_pilon:2668246..2672032- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040172 ID=XLOC_040172|Name=XLOC_040172|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3787bp|location=Sequence derived from alignment at sc0000012_pilon:2668246..2672032- (Clytia hemisphaerica_ch_hm2_pilon)
TTGAAGAAAACGTTAAAGACATTTAAAGGTTGGTGAGAAGTTTCTTATTT
TTTTTTTAATTTGGCAAATATATTGAAGCTTCCCAGAGCGACCAGTCTTC
CTACTTCTTTATTGAATTTTCGAACTGAAGTTTGATTTCAATGTTTGAAA
TAATTGATAAAAACTGCAAAAGAATATAAAATTTCTTGGAAAAACAAATT
GTGCTGAAGGTCTGGAGGATTTGCTGTTTAATTTTTTCAGAGATGGTAAA
ATTCCAGGCTAGTTCGAAATTTTTTTCATTTCTTTGCTATTTATGTTGAA
ATTTCTCATAAAACAGTTAATATCTTTCAACTCGGATGTCTCAATAACTT
ATTATAACTTAGGGTTTCCATAGCTCAAACGATTACTGCTTCACTTGTCA
GGGTCGATTTCACATCAAAATTATGTTTATTTAGTCTTTGTCAGATACTT
CTACATATTTGAACCTATTCTAAGCAGTTAGCATTAGTCAGAGACAGGGG
TGTATAGAATAAAAAAACAAGAGCCGCCTCCAATGAATATCTCTTAATTT
TACCGCTAAATGTAAAAGAAAACCCAATATTTTGCAACCCGTCAAAACAT
ACTTGATAATCTAGATGTGAGGTCTTACACCTTGTCCATGAACTGCGGAG
ATAACAGGTGATTATTAAGGAGATAAATGCAAGGACGCGAGCCAAAATAT
ACATAATCCGCGCTTTTTTCTCAAAATTCTAAGAAAATCTTTTGTTCGAG
GATTCAGTGAGTCAAAAAACACACGGCTAACCTTTCCAACAAAGTTTCAA
GCTGTTATTATGAAAGTTTCATACAAATTTTATGGTCATATTTCATTTTA
TAGTTATATCATTGGTACTACTGCTTATCACAATATCTCTGATCTCGCTG
ACAACGTTTATTTTCCTGAGATCTGGACAGCCTGGGTGTGAACGACAAAA
ATTACTGTCTTTCTCACCTACAACTTCAACGACAGATCTTTATTCTGAAA
ATGGCTCATTTGGAAGCTACGATGAGGAGGTTTTATCAAAAATACGAGCA
AATGTACACTCAAAATTGCAATACAGAGCGCAGAAAATGTCTGGCACTCT
TCTAAAAGCTCAATCCAAAACAACTGCTGTCCCATCTTCTACACCTACAA
GTATCAATAGAAGAGTACGTAGAAATCCGAGTACGAAAATGCTGTGCAAT
ACAAAATCACCCAGTTGTTTGACTCAACGAAAGGAGATTATAGCTTTTTC
CGAAGCATTTGATGTGGAACTTCATTATAATGGTATTCACTCAAAGATCA
TTATGCTGATATGTCGAGTAAGTTTCGCCTCTGTTTCGGTTGAGAAAAAG
GCTCTGAAATTTCAAAAATTCAACTTCTTAAATTTGCTGAAAACTTAAAT
CCCACTGCAATAACTTTTTGTCACACAAATTAATATACTAGAAATTTTAA
TAAGGCCTATTCATCCCGATTATCTTATGTTTTTATTTTTATGGTATTTT
TATATCTAATCCTTTTATTCTTTTATCGAAGGGACACATATAAAAATAAT
TTCCCTAAAATGTCACAAAAGAATTTTTGATTTTAATATTTCACTATTAT
TATTCCCCTTTTTAAATGGGTTAAATTCAAAATACCTTAAACATGCATAT
CATTATATTATTAATCCTTTTATCGAAGGGACACATACAAATGTAACAAA
ATAAGTTTTGATTTTAATATATCATTACTATTGTTCCCTAAATGAAATTC
CCCTCTTTAAATGGTTAAATTCAAAATACCTTAAGGATACATATCATGAT
CCCTAATCATCCTCGATCAACCATGGTTTTACTTTTTCCCAATGTAGTAA
ATTATTTTTCATTTCCCCCTTCTGTTCTGAATAAGGGAATTAATGACATG
ATGTCTTATTTTATCATATATCTTATTACATTCAAATCTTTTATTGAAAC
TTTCCCTAAAACCATTTAAAAAATCCTTATTCCCTACTTTGATAAAAAAT
AAAGAGGTTCTTCTGAAATCAAATGATTTATTTAGACAAGGTAGTGAACT
TCAAATGTTCCAATTAAATTTTCGTCTAACGATACACCATGGTGGTGGAC
CTGAACGTAAGCTGGTTGTTATTTTAACGCATTGTTTTGTACAGGTGAAC
GTGAAATTAAATATAATAATGTTTTCTTTATAGTTCGATAACAGACCAGC
AAGTTGTGAGTCGGCATCTCGAGCACCAGACACTTACCGAGGAAATTCTG
ATCTTCCTTTGAAAATTGATATCAATAATGAAGAAGTAAGAAAATTATAT
CTTTCTTTTTATAAACCTTTGCATCAATAGATTAGTACATCCCTGTCTCG
CAGCCCCGGTGGAGCTTTTTCCCTCAATGGGAATAAAACTTCCTATTGAA
ATCCCAATGGAGATCGAGATTTTATTGTTCCAAGGTTACAAAATCCAATG
GGGATGGTTTTGGAGTGCAAAAACATTGAATTCCGAGTGGGGATGAAATC
AAAGTCCCAGTTGGGTATTATCCCACCATGGGCGAAATCTTTACCAAATT
TTCCAGTGGGGCTGGGGTCCCAGCTGGTCTCTGACACAGGAATGCATTAG
TATAAAAGATGCATGGTTGGTTGAACCTTTGAACACCCCTGTGTCAGAAA
TCCACTGGGAAATCGACTTTGTTTTTATCCCGATTTAAAAAGCATGTTGG
GAAGGAAGAACAGGTTCGTGAGACAGGGGTATCTTTGAAATTATTCTTCA
ACCTTGGTTACTAGTTGTATTATTTTCGAGCTGTTTTTTTAGCCAGAGGT
AAAAATTATGTTCCGGTAGATGCTTTTGTGAAATAGAAGTTCAACCTGAC
TTAGAAAGAATACATTTTAATTCAAAGAAATATTGCACTTTTTTCTGATT
ATCACTTTTTCTCCTTTATAGCATATAGTGGTGCTACATGACTACTTGAA
TATGACTCGTCAATTTTCGAAAAGCCTCAAATTAATGGAACAACATTTCA
AATCACAAGCTGGTCAAACAGAAATAGCAGATGGTTTAGATGTACTTTTA
CAACGTCTATCCTACCTGGCAGACAAAATGGCCAACCTGGAAAAGGTATT
GTCCAAATTTCATTTAATTTTCACCCCCGTCTCTTGTCCAAATTCTTTTT
ATTTTCACCCCTGTCTCTAGCTGGGTTGGTTAGGTCTAATAGATGCTTAG
TAGGTTTCAGGAAAACATTACGATTATTGAACATACTAAACAACAATACT
TAAGTCTGAAAATTAGAGGATAAGAGGAACCGTGTAGTGTTAGGGTTAGG
GTTAAGTTTTTTTTTCCTAACCCTGGGTTTAAGCTTTAGAGAATCGGGAC
AGTCAATTCGTCAATGTAAATTTACCTATCTGGCTTAATATAGTTTGAAA
TCCAAAAAAAAAACATTTTAGGAATTATTCCATACCACCTTTTGACTGGA
AAAGACTCGTGGCCAATCAGAGCTTTAAAATCCCAAAATGATCACCGAAA
AAATAACAGCAAAAACAGTTAAACTAGTTATAATTATAACATTGTCTTTT
CTACATCTTTTTCAGTCGTTTATATCATGTGGTAAATGTACAAACATCCA
ATACAAACCCACGCCACAAATTATGCAATTCAACAGCACTCAATTACGAA
ACCAAGCCAAATTAATTCCCACACCCAAAAGTGTGTCGTTGGAAACAGTG
CAATCTCAATACATCGTACAGGTGTTGTCTAAATTTGTTGAACAAATGTC
ACAAGTCTTTAGAAGACAACAACGTTGTTTGATCTGA Coding sequence (CDS) from alignment at sc0000012_pilon:2668246..2672032- >XLOC_040172 ID=XLOC_040172|Name=XLOC_040172|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1980bp|location=Sequence derived from alignment at sc0000012_pilon:2668246..2672032- (Clytia hemisphaerica_ch_hm2_pilon)
TTGAAGAAAACGTTAAAGACATTTAAAGTTGAAGAAAACGTTAAAGACAT
TTAAAGTTATATCATTGGTACTACTGCTTATCACAATATCTCTGATCTCG
CTGACAACGTTTATTTTCCTGAGATCTGGACAGCCTGGGTGTGAACGACA
AAAATTACTGTCTTTCTCACCTACAACTTCAACGACAGATCTTTATTCTG
AAAATGGCTCATTTGGAAGCTACGATGAGGAGGTTTTATCAAAAATACGA
GCAAATGTACACTCAAAATTGCAATACAGAGCGCAGAAAATGTCTGGCAC
TCTTCTAAAAGCTCAATCCAAAACAACTGCTGTCCCATCTTCTACACCTA
CAAGTATCAATAGAAGAGTACGTAGAAATCCGAGTACGAAAATGCTGTGC
AATACAAAATCACCCAGTTGTTTGACTCAACGAAAGGAGATTATAGCTTT
TTCCGAAGCATTTGATGTGGAACTTCATTATAATGGTATTCACTCAAAGA
TCATTATGCTGATATGTCGATTATATCATTGGTACTACTGCTTATCACAA
TATCTCTGATCTCGCTGACAACGTTTATTTTCCTGAGATCTGGACAGCCT
GGGTGTGAACGACAAAAATTACTGTCTTTCTCACCTACAACTTCAACGAC
AGATCTTTATTCTGAAAATGGCTCATTTGGAAGCTACGATGAGGAGGTTT
TATCAAAAATACGAGCAAATGTACACTCAAAATTGCAATACAGAGCGCAG
AAAATGTCTGGCACTCTTCTAAAAGCTCAATCCAAAACAACTGCTGTCCC
ATCTTCTACACCTACAAGTATCAATAGAAGAGTACGTAGAAATCCGAGTA
CGAAAATGCTGTGCAATACAAAATCACCCAGTTGTTTGACTCAACGAAAG
GAGATTATAGCTTTTTCCGAAGCATTTGATGTGGAACTTCATTATAATGG
TATTCACTCAAAGATCATTATGCTGATATGTCGATTCGATAACAGACCAG
CAAGTTGTGAGTCGGCATCTCGAGCACCAGACACTTACCGAGGAAATTCT
GATCTTCCTTTGAAAATTGATATCAATAATGAAGAATTCGATAACAGACC
AGCAAGTTGTGAGTCGGCATCTCGAGCACCAGACACTTACCGAGGAAATT
CTGATCTTCCTTTGAAAATTGATATCAATAATGAAGAACATATAGTGGTG
CTACATGACTACTTGAATATGACTCGTCAATTTTCGAAAAGCCTCAAATT
AATGGAACAACATTTCAAATCACAAGCTGGTCAAACAGAAATAGCAGATG
GTTTAGATGTACTTTTACAACGTCTATCCTACCTGGCAGACAAAATGGCC
AACCTGGAAAAGCATATAGTGGTGCTACATGACTACTTGAATATGACTCG
TCAATTTTCGAAAAGCCTCAAATTAATGGAACAACATTTCAAATCACAAG
CTGGTCAAACAGAAATAGCAGATGGTTTAGATGTACTTTTACAACGTCTA
TCCTACCTGGCAGACAAAATGGCCAACCTGGAAAAGTCGTTTATATCATG
TGGTAAATGTACAAACATCCAATACAAACCCACGCCACAAATTATGCAAT
TCAACAGCACTCAATTACGAAACCAAGCCAAATTAATTCCCACACCCAAA
AGTGTGTCGTTGGAAACAGTGCAATCTCAATACATCGTACAGGTGTTGTC
TAAATTTGTTGAACAAATGTCACAAGTCTTTAGAAGACAACAACGTTGTT
TGATCTGATCGTTTATATCATGTGGTAAATGTACAAACATCCAATACAAA
CCCACGCCACAAATTATGCAATTCAACAGCACTCAATTACGAAACCAAGC
CAAATTAATTCCCACACCCAAAAGTGTGTCGTTGGAAACAGTGCAATCTC
AATACATCGTACAGGTGTTGTCTAAATTTGTTGAACAAATGTCACAAGTC
TTTAGAAGACAACAACGTTGTTTGATCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012_pilon | genome | sc0000012_pilon:2668246..2672032 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 769-990:223 |
| Aaloc | 595-768:867 |
| Aaloc | 493-594:1605 |
| Aaloc | 31-492:2933 |
| Aaloc | 1-27:3788 |
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