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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000012_pilon:2647550..2653026- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040171 ID=XLOC_040171|Name=XLOC_040171|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5477bp|location=Sequence derived from alignment at sc0000012_pilon:2647550..2653026- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAATCAACGCTGCATTTATGCTTAACAGGTTTGTTAGTTCTATT
CTTTTTGGAATGAAACAGAATTCCCAATTAAAATTTCCTTCTTTTTCGAA
ATGTTCAGATGAATATTTGATCACATTTTTTTGGGTGGGGCCACAAGTAG
TTCTTGTTTTTAGCTATATAAATCAGTATTTCTTATCAGCGTTAATCGCG
TGTTATCATTATTTTGCGATGATTGGTCAATAAAATGCCCTGGTATCAGT
GGGGACAAAATTGGAGTATAGTTTTACACTGGGCACGATTTTTTGGCTAA
TTTTTCCAATGGGAAGGGGTCCTAGTGGGTCTGTGAGAAGGGGGTGTCTA
AGATTCATTCATCACCATTCGTGTAATTCCTTGAAGATAAGATATTAGCA
TTAGGACTACGTCCCAACAGCTTTACATTACATTTAATTCTGCATTTGTC
ATAATAAGGAAAAGGAAATGGCGAGAAGAAATCTTCGAAATCGGTCAAAA
CCTTGTCACTCCTAAGGTCATTGCTCTATCAAAACCGACCACTTCCCGAA
ACAAGGATTTTTATGATCTCTGATTATTTTTCCTTTTTTACATAACATAA
CATGCACTTTCATTTCCTCGATTTTCATTTTCGATGATTTGGTTTTGATG
TTTCTCAGTCAGCATTGATTAATTAGTCAATTAAATACATGCTTTCGTGT
TTCGTGAATCGAACTACACCCAATCGACCGATTAATAATAACAAAGGTTT
TCAAAAATTTCTGAATGACAAGAGCAATGGTTTTTTGGAATTCTCGAAAA
AGTAAAAAAAAATCTGGATTTAAGAGAGCATATAAAATATTTGCACCCTT
TGGATGTTCTTAGATTCTTAGCTTTTTGAGTCTTAAGCCTAAAATTGTTC
TTAAAAAACTGTTCTCAACTCCCTCTTAATTTCACTATTTTGCGAGTATT
TGCGAAGCAATTTTCTAAGAAATTGGGTGTTTTAGAGTACGCAAAGTCTT
GAAATGTTCTTAAAATGTTCTTAAGATTTTGGCTGTCGAAGCCCTATGTT
CTAATATAGTTTGTTCGTGAAAAAAACGTGTAGCGAAGAGCAAACTCACA
AATGAATTAAAGCCTTCTGTTTACGTCTTCATTTTTCAAATCCAAAAAAT
GAGAAAATTATAAGACAACCCTGACATCAAACACAGATTCCAGAATCACC
GAAAAAGCCTCCATTCTTTGAGATCGGAATCCTCATGATTCTTAATTTGT
TGTTTTAGGGATCGTCATCGCACTATTAACCTGCGTGTGTACTATAATTG
TTCTCATTACACTGGAGGGAATAGAACTCCAAATTGACGACCTGGCGACC
AAATACAACACAAAGCTAGACAAACAAGTTGAAACACCGCAACTTGAATA
CTTAAGTCAACCCGATAAACAACAATCAATCTCAGCCAACTCAGTATGTC
AAAGTGAGCAAACAAAATTTCTGGAATTCGCAGCTCGGATTGTGATGTTA
CAAGAACATCAAAGAATTGAGGACTCGACAGAAGGAATCGCTAGAAAGTT
AGCATGTCATTATGTAAGTAAAGAATGTGTTTGAGATATTTTGATGCATG
TGGAGGTCATAAGGTCAATCGAATTAAATCAATTATCAAACCCTCTCTAC
AACGGACTGGCCATTGTATACAACAACATTCCGAGATAATTAATTGGCAC
ACCTACATACTGTGATTTGCTTTTTTATTTTTCGCAGCGTAATACTTTGT
TTATAAGGATATGCATAAATTATAAATAATTTACATAAGCGAAATTCTAG
GAAATTGCAACATCACGATTTTTATAAGAACCAGTAAATTTTCAAGGCTG
ACCACCTCTTATTTTCAAGCATTTTAAGGCTAAAATTGTTCTTGTCTTGT
TCATGTTTCTGGGAAAGGCTTGAGTAGGTTAGTAGGGTATTTTTACTAAT
TCAACCCTTGATTTGCTTAGAGTTCAGTCATTTCAGGCATTGTACTTTAA
TCGTTCTTTTTAATGTTCATTTGTCTTGACATTTTTCTTATAAAAATGAG
TGCAGCTCTCTCGTTATTTTGTCTTTGGGGAAACTGTGAAATGATATTAA
GTCCGAGTTAAGAGTCTGATTAACTCCGGATAAACTTTGGAAGTATTTCA
TTGCTGTGATTTAATCAATTCCAACTATTTCATGCAGTCCTAACAAAGAG
GGGAATTAAATCATCATTCTTTACTGGATGGAGACTATGGTTCCAAAAAA
AGAGCAATTAAATAATCAGCCAGCAGTTGCTTATTGGTGATATTGTATTA
TTTTATTGTTTATAGGGGCGAAAAGCATTAAGCTCTGGACTTGGTTTGAC
AACGTACAAATTGGAAATACCGTGTGATAATAGTGTAGATGTTAATTTCA
ATATCAGAAATGAAATCAAAAGTCTGCGGATAAAAGATCTGAAAGAATAC
ATCATGAATTCAAGAGGGGTAAGCGTCCAAAAAAACGTCTACAAAACGTC
CTAAAACGTTCATCTAACGTCCAAATGTCGTCCAAATGTCGCTGTATATA
GCAAATGAGACAGTAGTAATTCAACCCTATAGTACCTTGGACCTTCGACA
CCCTATAGTATGTGTTACATAAGGGACATATATAAGAGCTGATTTGAAAA
AAAAAACTAAATTAAACTAAATTTGACGATTTTCTTTCAATTTTTGATTA
CATTCTTATACCCTTTAAGGCTTAAAATCAGCCTTTTGATCTAATTTGGT
CCACTTTTGCTAAAGATTTTAGCTCAAAGGCTTAATTACTTCTTATGAGA
CCTCAAATGAAAAACAAACCACAAACTTTGAATGTCCACATACGTAAACG
CCGAGTATTATAGGGTTTAAACCATAAAAGTATATTTCAGAACCTTGAAA
AGCCGCGTGAAGAAATTTGACTGTTAAATCAAAGTTTTTCTCACGATCCT
TTGTTCGATTCCTAGTACCTCCTCTGAGAGCACTACTGTCTGAGAATTGA
TCTGATTTAGGAATAATTGTGCTAAAAAGGCCTGAAGTGTTTTAAGTATG
AATATTTGCATATATTGTAAACTTCAAAGGCTATGATGTACCTTAACCAT
TTTTCTATCCTTTATTTCCTAGGATTCAAGTGTTATAGAAATCCATATTC
AAATTTTCGTTCAATTTTTGAACGAGTTTAACACGATATCATTTCAAGAA
ACGAATAAAACATTAAAGAAAGATCTGGTTCACATTCGGAATATCTTATT
GATGGATATGCAGTTCTTGGAAAATTATAAAAAGGTTAGTACAAAGTGAA
TTCGAAATTATACTAAAGAACCAATACTCAGTCCCTGCTAATCCTTATCT
AAAATACTTTTTTAATTGAAATTTCTCCGTTATTCGAACAAATTTAGCAT
CCCGTTCGAGTTAGCAAGATATATTTAAGTTTTTAGATCGAACTCTAATA
ATCTGCAATCAATTGTTATGATACACGTTTTTTTATAAGAACAAAGTAAA
CTATACAAGAACACAATGATTGGATGTTAAGCACAAGTTAAGAACATTTT
AAGGCTTTATGGACACTGAAACACCCCTACTTCTTAGGAAAATGGACAAA
AATGTTCACAAAATAATGAAAATAAGAGCATGTCAAGAACATTTTTAGGC
TTAAAACTCAAAAAGTAAAGAACATCAAAAAGCTTCAAAATTTTTGAATG
GTCTTATACAAAAAAGGTGTAGCGTTGATTTCTTGGGTGCAAAGTGTCTT
ATGAAGTGAATTTTATATCAAACGATTTCCTAGGAGCATGATTACCCAAA
AAAAAACTAAAAACAAAACAATAATACCACAGTTATGTTGACACCTCTGC
AAAGCCATTGACCAAAATTTGAAACTTCCCACTTTCTAAAAGTGGTTTGA
CATATTTTCGAAAGAAACAGTTTACACCAAAGTTGACACATAGTTTAGCA
TTTTCTGTTCAGTAAACAAGCTAAATCACAAAAACCAAAGTTGGAAGGTA
TACAAGGAGACCCACGCTTTAAAGGATCATTATCCATCAAATTAGGGAAA
TGAAAATGAGGTTTCTATTTAATTGGATGGTATTTTTCTTTACTAGACAG
TATCCATCGCTAATCCCCAATTGAAGCGATTGATACTTTCAGCGGGACTT
TGAGTTATACCCAGCTGGCACACAACGTTGTTTCAACGTTTATTTAACGT
TCACAACGTCCACATAACGCTAGATGAACGTTGAAACAACGTTGTGTGCC
AGCTGGGTATACAACAGGGTCTTCGTGATGTCATGATAGTGTTGGTAGAA
ATCTTCAAATATTAGGGTCATTTTTGAAGACACCTTTTAGAATATTTTTC
AAAAATTATTTCTGCAAATTCATTGCATTTTAAAATGGCGAGGAAGAAAC
TAGTTGTTGAATAGAGGTGAAAAGGTCAAAGTTCTTTTTCTTCCTACAAG
AAATAATTTTTACAAGGAGACATAAAAAGATTTCTTACTTTAAATGTAAC
GATCGATAGAAAGTTTTTTTATGACTGTGACGCATTTTGGACCACAAAAA
GCTATAGAAATAGAGTCGTTACACTAGTTTCATTTCTCTCCTCGTAGGCG
TCCGAAGTTTCCTTTTCAAGTATACCACAAATTAAAACATACAACAAAAT
GCCCATGTCTATTTTCCTAAACAAACTTATCTACAAAAACAAAAATATTA
TTCGAACTCATAAATTTATCCCTTCTTAGTTCCTAATATGCGGCAAAGTA
CGTCAACGCGAAGCCATGGGTCCAAATAATACTTGACCATGGACGTTGAA
AAGACGATCTGTGACATATCTTTAATATCTTTAATCAGAACTCAATGTAG
AAAATATAAATTAGACAAAAATAGAGAAGTAGGTCTTTGGTACAGATATG
GTTTCATGGCCAGAATTATCATTCTATTTCTCCAAATAAAATTGTATTTT
GAGTGCATTTTCAGGCCATCTTCAAAATCCCCCTACCCCATGGGCAAAAC
ATTAGTTTCAAGTTCATATCGAAATGCTTCCTACGACACTGGAGTTAATG
CATTGACTTCAGACATTTTACTCTATTACTAAGTTTACTCAAGCTTTAAG
GGCTGAAAAAGTATATTTTAATCAGCATCCAATTTTTCCTGATTTAGAAA
CTTGTCTACTGTCATCATGTCAACATTTCATCCCTCGATCTCAAGAAAGA
ACGTTTGATACATCGATTCCACGACGACACATTCTTCAACTCTATGAAAC
CAACCTCCACTAATATACATGATACATCTTTCAAAATCTATGGCATTTTA
CAACAGTTTCTGAACTATCACAAATGGCTCAGAGTTGATTTATTCCATCG
TGTTGTATGCATGCCCATACCTAGTGCCCAGTGCCCAGACATTCTTTTAA
ATATGAGGAATAAAAGCAAGAACAAACACCAAGGCACTACAGACCCGAAA
GTCAAAAACCAAATTATACTTCAGTAA Coding sequence (CDS) from alignment at sc0000012_pilon:2647550..2653026- >XLOC_040171 ID=XLOC_040171|Name=XLOC_040171|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000012_pilon:2647550..2653026- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAAATCAACGCTGCATTTATGCTTAACAGATGAAGAAATCAACGC
TGCATTTATGCTTAACAGGGATCGTCATCGCACTATTAACCTGCGTGTGT
ACTATAATTGTTCTCATTACACTGGAGGGAATAGAACTCCAAATTGACGA
CCTGGCGACCAAATACAACACAAAGCTAGACAAACAAGTTGAAACACCGC
AACTTGAATACTTAAGTCAACCCGATAAACAACAATCAATCTCAGCCAAC
TCAGTATGTCAAAGTGAGCAAACAAAATTTCTGGAATTCGCAGCTCGGAT
TGTGATGTTACAAGAACATCAAAGAATTGAGGACTCGACAGAAGGAATCG
CTAGAAAGTTAGCATGTCATTATGGATCGTCATCGCACTATTAACCTGCG
TGTGTACTATAATTGTTCTCATTACACTGGAGGGAATAGAACTCCAAATT
GACGACCTGGCGACCAAATACAACACAAAGCTAGACAAACAAGTTGAAAC
ACCGCAACTTGAATACTTAAGTCAACCCGATAAACAACAATCAATCTCAG
CCAACTCAGTATGTCAAAGTGAGCAAACAAAATTTCTGGAATTCGCAGCT
CGGATTGTGATGTTACAAGAACATCAAAGAATTGAGGACTCGACAGAAGG
AATCGCTAGAAAGTTAGCATGTCATTATGGGCGAAAAGCATTAAGCTCTG
GACTTGGTTTGACAACGTACAAATTGGAAATACCGTGTGATAATAGTGTA
GATGTTAATTTCAATATCAGAAATGAAATCAAAAGTCTGCGGATAAAAGA
TCTGAAAGAATACATCATGAATTCAAGAGGGGGGCGAAAAGCATTAAGCT
CTGGACTTGGTTTGACAACGTACAAATTGGAAATACCGTGTGATAATAGT
GTAGATGTTAATTTCAATATCAGAAATGAAATCAAAAGTCTGCGGATAAA
AGATCTGAAAGAATACATCATGAATTCAAGAGGGGATTCAAGTGTTATAG
AAATCCATATTCAAATTTTCGTTCAATTTTTGAACGAGTTTAACACGATA
TCATTTCAAGAAACGAATAAAACATTAAAGAAAGATCTGGTTCACATTCG
GAATATCTTATTGATGGATATGCAGTTCTTGGAAAATTATAAAAAGGATT
CAAGTGTTATAGAAATCCATATTCAAATTTTCGTTCAATTTTTGAACGAG
TTTAACACGATATCATTTCAAGAAACGAATAAAACATTAAAGAAAGATCT
GGTTCACATTCGGAATATCTTATTGATGGATATGCAGTTCTTGGAAAATT
ATAAAAAGAAACTTGTCTACTGTCATCATGTCAACATTTCATCCCTCGAT
CTCAAGAAAGAACGTTTGATACATCGATTCCACGACGACACATTCTTCAA
CTCTATGAAACCAACCTCCACTAATATACATGATACATCTTTCAAAATCT
ATGGCATTTTACAACAGTTTCTGAACTATCACAAATGGCTCAGAGTTGAT
TTATTCCATCGTGTTGTATGCATGCCCATACCTAGTGCCCAGTGCCCAGA
CATTCTTTTAAATATGAGGAATAAAAGCAAGAACAAACACCAAGGCACTA
CAGACCCGAAAGTCAAAAACCAAATTATACTTCAGTAAAAACTTGTCTAC
TGTCATCATGTCAACATTTCATCCCTCGATCTCAAGAAAGAACGTTTGAT
ACATCGATTCCACGACGACACATTCTTCAACTCTATGAAACCAACCTCCA
CTAATATACATGATACATCTTTCAAAATCTATGGCATTTTACAACAGTTT
CTGAACTATCACAAATGGCTCAGAGTTGATTTATTCCATCGTGTTGTATG
CATGCCCATACCTAGTGCCCAGTGCCCAGACATTCTTTTAAATATGAGGA
ATAAAAGCAAGAACAAACACCAAGGCACTACAGACCCGAAAGTCAAAAAC
CAAATTATACTTCAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012_pilon | genome | sc0000012_pilon:2647550..2653026 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 655-984:331 |
| Aaloc | 493-654:2356 |
| Aaloc | 340-492:3163 |
| Aaloc | 37-339:4218 |
| Aaloc | 1-33:5478 |
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