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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000011_pilon:609055..610914- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040162 ID=XLOC_040162|Name=XLOC_040162|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1860bp|location=Sequence derived from alignment at sc0000011_pilon:609055..610914- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGAAACCAAGCTCTACTAAACGTGAAAGAGCTTCTGGTAATGCAGG
TCGTTGCACAAAAGCAAGATCAAAGGCTCTTTATGCTCCAAAGAAGAAAA
CTTACAACTTCGAGAAGAAGCGACCGACTGCGACTACGGCTTCAAAATCG
TCAATCGACAACACTTCAAACAAGGAAAGTGAACTTCCAGAGACTGCATC
TAGCTCTAAAATTGGAAGTACAACTATACCTGAGACTCCTGAAAAATCAA
GACCAACTGAAAATAACAGCAGTACTACAAACCCTGGTCCAAAAATGATT
CACGGCTACCGTTTTGTGGATATGACGATATTAGCGTCAATCTTCACCGT
CCTTAGTTGCCCTGGATGTAATGGTGTACGTTGTCTAAACCTCCATGAAA
ATGATGTTAAAAAGAAAGGACTAGCAAGCCATCTTGTTCTTCAATGCTCT
GTGTGTCTTTATGAGCAATCATTTTTCACTTCGAAGCAAGTGCAATACCC
GAATGAAGGACGCGGTGGTGCTAAATTCTTCGATGTGAATGCTCGGTCAA
TTTATGCTTCACGACAAATAGGTGGAGGCCATGAACATTTGAAAAAGTTT
TGCACTTACATGAATATGCCTCCACCAGCTCTTGAAGGAAGCTATAGCAA
AATGACAAAGAAATTGAAGGAAGCGGCAAAAACTGTTGCTGAAAAAAGCA
TGTCTGATGCTGCCGCTGAACTGCGCGGGGAAGCAGAATCAGCTGACGTT
GGCGTTTCTATTGACGGGACATGGCAGAGAAAGGGATATACTTCCATGAA
TGGTGTTGTGACTGCTATATCAGTGGATAATGGAAAGGTTCTTGACACAG
CTATCATGTCAAAGAATTGTAAAGGCTGTACCAAAATGAAGTCTGTTAAA
ACCACTGATCCGCAACGATATGACGCGTGGAAAGCTTCTCACAAATGTGG
GCTCAATTTCAAAGGATCTTCCCCAGCAATGGAAAAAGAGGGAGCAATAA
ACATTTACAATAACTCTACTAAGAAACATGGGCTATATTACACTTCATTT
TTTGGTGACGGTGATTCAAAATCGTTTACGGCGGTACAAAATACCTATGG
TCCGCGCAAGCCTGTAAAGAAACATGAATGTATTGGCCACTATCAAAAAA
GAGTCGGAACTCGTCTTCGGAAATTGAAGAAGTTAAACAAACGCCTAGGA
GGTGCAGGAAGATTGACTGATGCCAAGATAGATTGTCTCCAAAATTATTT
TGGCATCGCACTGCGTCAGAATGTGAATAATCTTGACGAAATGGTGAAAT
CAACCAAAGCGTCAATGTTTCATGTTGCGGGATACCATGACAACTGCCCC
AATCATAAAGATAGCTGGTGTCAATACAATCTTGACAAATTAAATGGCAC
CAATTTCTACAAAAAGAAAGGCTTCCCTTTAGATGTACGTCAAGCAATTT
TGCCAACCTACAATGATTTATGCACACGCGAAAAACTCGAAAAATGCTTA
CACGGTCGTACTCAAAACGCAAACGAGAGTTTTAACGGTATGATTTGGAA
CCGCATCCCAAAAGCCAACCATGTGGGTTTACACATCCTCAGCTTTGCTG
TCTATGATGCTATTTCTCATTTCAACAATGGTGGTATAGCAGCCTACAAC
ATCTTAACTAAAATGAACATGGAAGCAGGAAAGTACACGGTCAAAGGTCT
AAACCTTCAGGATTTGATCCGTAAACGACGGTCAGCTTACCGAATGTCTT
CTCCCCAAACAAAGAGAAGAAAAGTTATCAGACACCTGAGAAAAACAAAA
CAAGACAAATTAATTGAAAAAGAAGGGAAAACTTATGAATATGGTGGCTT
TGAATGTTGA Coding sequence (CDS) from alignment at sc0000011_pilon:609055..610914- >XLOC_040162 ID=XLOC_040162|Name=XLOC_040162|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3720bp|location=Sequence derived from alignment at sc0000011_pilon:609055..610914- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGAAACCAAGCTCTACTAAACGTGAAAGAGCTTCTGGTAATGCAGG
TCGTTGCACAAAAGCAAGATCAAAGGCTCTTTATGCTCCAAAGAAGAAAA
CTTACAACTTCGAGAAGAAGCGACCGACTGCGACTACGGCTTCAAAATCG
TCAATCGACAACACTTCAAACAAGGAAAGTGAACTTCCAGAGACTGCATC
TAGCTCTAAAATTGGAAGTACAACTATACCTGAGACTCCTGAAAAATCAA
GACCAACTGAAAATAACAGCAGTACTACAAACCCTGGTCCAAAAATGATT
CACGGCTACCGTTTTGTGGATATGACGATATTAGCGTCAATCTTCACCGT
CCTTAGTTGCCCTGGATGTAATGGTGTACGTTGTCTAAACCTCCATGAAA
ATGATGTTAAAAAGAAAGGACTAGCAAGCCATCTTGTTCTTCAATGCTCT
GTGTGTCTTTATGAGCAATCATTTTTCACTTCGAAGCAAGTGCAATACCC
GAATGAAGGACGCGGTGGTGCTAAATTCTTCGATGTGAATGCTCGGTCAA
TTTATGCTTCACGACAAATAGGTGGAGGCCATGAACATTTGAAAAAGTTT
TGCACTTACATGAATATGCCTCCACCAGCTCTTGAAGGAAGCTATAGCAA
AATGACAAAGAAATTGAAGGAAGCGGCAAAAACTGTTGCTGAAAAAAGCA
TGTCTGATGCTGCCGCTGAACTGCGCGGGGAAGCAGAATCAGCTGACGTT
GGCGTTTCTATTGACGGGACATGGCAGAGAAAGGGATATACTTCCATGAA
TGGTGTTGTGACTGCTATATCAGTGGATAATGGAAAGGTTCTTGACACAG
CTATCATGTCAAAGAATTGTAAAGGCTGTACCAAAATGAAGTCTGTTAAA
ACCACTGATCCGCAACGATATGACGCGTGGAAAGCTTCTCACAAATGTGG
GCTCAATTTCAAAGGATCTTCCCCAGCAATGGAAAAAGAGGGAGCAATAA
ACATTTACAATAACTCTACTAAGAAACATGGGCTATATTACACTTCATTT
TTTGGTGACGGTGATTCAAAATCGTTTACGGCGGTACAAAATACCTATGG
TCCGCGCAAGCCTGTAAAGAAACATGAATGTATTGGCCACTATCAAAAAA
GAGTCGGAACTCGTCTTCGGAAATTGAAGAAGTTAAACAAACGCCTAGGA
GGTGCAGGAAGATTGACTGATGCCAAGATAGATTGTCTCCAAAATTATTT
TGGCATCGCACTGCGTCAGAATGTGAATAATCTTGACGAAATGGTGAAAT
CAACCAAAGCGTCAATGTTTCATGTTGCGGGATACCATGACAACTGCCCC
AATCATAAAGATAGCTGGTGTCAATACAATCTTGACAAATTAAATGGCAC
CAATTTCTACAAAAAGAAAGGCTTCCCTTTAGATGTACGTCAAGCAATTT
TGCCAACCTACAATGATTTATGCACACGCGAAAAACTCGAAAAATGCTTA
CACGGTCGTACTCAAAACGCAAACGAGAGTTTTAACGGTATGATTTGGAA
CCGCATCCCAAAAGCCAACCATGTGGGTTTACACATCCTCAGCTTTGCTG
TCTATGATGCTATTTCTCATTTCAACAATGGTGGTATAGCAGCCTACAAC
ATCTTAACTAAAATGAACATGGAAGCAGGAAAGTACACGGTCAAAGGTCT
AAACCTTCAGGATTTGATCCGTAAACGACGGTCAGCTTACCGAATGTCTT
CTCCCCAAACAAAGAGAAGAAAAGTTATCAGACACCTGAGAAAAACAAAA
CAAGACAAATTAATTGAAAAAGAAGGGAAAACTTATGAATATGGTGGCTT
TGAATGTTGAATGGGGAAACCAAGCTCTACTAAACGTGAAAGAGCTTCTG
GTAATGCAGGTCGTTGCACAAAAGCAAGATCAAAGGCTCTTTATGCTCCA
AAGAAGAAAACTTACAACTTCGAGAAGAAGCGACCGACTGCGACTACGGC
TTCAAAATCGTCAATCGACAACACTTCAAACAAGGAAAGTGAACTTCCAG
AGACTGCATCTAGCTCTAAAATTGGAAGTACAACTATACCTGAGACTCCT
GAAAAATCAAGACCAACTGAAAATAACAGCAGTACTACAAACCCTGGTCC
AAAAATGATTCACGGCTACCGTTTTGTGGATATGACGATATTAGCGTCAA
TCTTCACCGTCCTTAGTTGCCCTGGATGTAATGGTGTACGTTGTCTAAAC
CTCCATGAAAATGATGTTAAAAAGAAAGGACTAGCAAGCCATCTTGTTCT
TCAATGCTCTGTGTGTCTTTATGAGCAATCATTTTTCACTTCGAAGCAAG
TGCAATACCCGAATGAAGGACGCGGTGGTGCTAAATTCTTCGATGTGAAT
GCTCGGTCAATTTATGCTTCACGACAAATAGGTGGAGGCCATGAACATTT
GAAAAAGTTTTGCACTTACATGAATATGCCTCCACCAGCTCTTGAAGGAA
GCTATAGCAAAATGACAAAGAAATTGAAGGAAGCGGCAAAAACTGTTGCT
GAAAAAAGCATGTCTGATGCTGCCGCTGAACTGCGCGGGGAAGCAGAATC
AGCTGACGTTGGCGTTTCTATTGACGGGACATGGCAGAGAAAGGGATATA
CTTCCATGAATGGTGTTGTGACTGCTATATCAGTGGATAATGGAAAGGTT
CTTGACACAGCTATCATGTCAAAGAATTGTAAAGGCTGTACCAAAATGAA
GTCTGTTAAAACCACTGATCCGCAACGATATGACGCGTGGAAAGCTTCTC
ACAAATGTGGGCTCAATTTCAAAGGATCTTCCCCAGCAATGGAAAAAGAG
GGAGCAATAAACATTTACAATAACTCTACTAAGAAACATGGGCTATATTA
CACTTCATTTTTTGGTGACGGTGATTCAAAATCGTTTACGGCGGTACAAA
ATACCTATGGTCCGCGCAAGCCTGTAAAGAAACATGAATGTATTGGCCAC
TATCAAAAAAGAGTCGGAACTCGTCTTCGGAAATTGAAGAAGTTAAACAA
ACGCCTAGGAGGTGCAGGAAGATTGACTGATGCCAAGATAGATTGTCTCC
AAAATTATTTTGGCATCGCACTGCGTCAGAATGTGAATAATCTTGACGAA
ATGGTGAAATCAACCAAAGCGTCAATGTTTCATGTTGCGGGATACCATGA
CAACTGCCCCAATCATAAAGATAGCTGGTGTCAATACAATCTTGACAAAT
TAAATGGCACCAATTTCTACAAAAAGAAAGGCTTCCCTTTAGATGTACGT
CAAGCAATTTTGCCAACCTACAATGATTTATGCACACGCGAAAAACTCGA
AAAATGCTTACACGGTCGTACTCAAAACGCAAACGAGAGTTTTAACGGTA
TGATTTGGAACCGCATCCCAAAAGCCAACCATGTGGGTTTACACATCCTC
AGCTTTGCTGTCTATGATGCTATTTCTCATTTCAACAATGGTGGTATAGC
AGCCTACAACATCTTAACTAAAATGAACATGGAAGCAGGAAAGTACACGG
TCAAAGGTCTAAACCTTCAGGATTTGATCCGTAAACGACGGTCAGCTTAC
CGAATGTCTTCTCCCCAAACAAAGAGAAGAAAAGTTATCAGACACCTGAG
AAAAACAAAACAAGACAAATTAATTGAAAAAGAAGGGAAAACTTATGAAT
ATGGTGGCTTTGAATGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000011_pilon | genome | sc0000011_pilon:609055..610914 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1860:1861 |
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