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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:906355..909179- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040161 ID=XLOC_040161|Name=XLOC_040161|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2825bp|location=Sequence derived from alignment at sc0000006_pilon:906355..909179- (Clytia hemisphaerica_ch_hm2_pilon)
CTATTTAGATCCACCTGGAACTTGGGTAGCTCTATTTCAAGATTACACAA
ACACTTCAACTTTACACCTCAACTGATATTAATCACAAGAAATCATTCCA
ATATGCGGCGCTGGAAGCAACTTGAAGGAGAAAGTGAACTGAAACTTTAC
AACAGTCTTACCAGAGAAAAGGTAAATTATAATGTTTGTTACCTTTTTCC
CTTTTCTCTACTATTTTCTGGAAGTTTCAAGCATCAAGGCATCAAATAGT
ATTTTTGTCTTGATCCTTTGTCAAAATATTATACTACTTTTTTCCCAATT
ATAGTTTCTTTTGTTTTCAAATAATTGTTATAATCATTTTGATTCTCTAA
ATTTTGAAATGGTAATATTATTATCTTTCTATTTGTTATAGAATCCATTC
ATACCACATGAAGGAAAACAAGTTTTTTGGTACAGTTGTGGCCCCACTGT
TTATGATGCTTCCCATATGGGTCATGCAAGGTTTGCAAATCCCCTTTGAA
GTAAACATATTTTTCTGTATGGAACCAAGTTGCTAATGTACAAAATTAGG
AAGTTGTCAGAAAATGAGCATTGCTAAGCAAACCCAGCCCTGACCTGGAA
ATTGGAGTTACTTATAAAAAACATAATGTGTAAACGGAAATGAGATTTCA
TGGTTTATAAAACGTTCCAACTTATCTTTTGGATTTATAAATAAAGTTGC
ATTTTTTTCTATTTTCAACCTTTGCTTTGACTTGAGAATCTTAATTTAGC
TCAACTTACCTTCGATTATATTATGATAGATTATCAAATTTTTCATTTTA
GATCTTACATCACCTTCGATATTTTAAGAAGAGTTCTTTCAGATTATTTC
AACTACGACATTTTTTATGTAATGAACATCACTGATATTGATGATAAGGT
ACTTATTGTTTTTTTGCATTTTCTCTTTCTGAATTACTCGTGGGTTTGAA
TATCTGAAAAAGTTAAAAATATTTTTTAAAACACAAAGCGTTCTAGTATT
CTCCTAGTCAAGAGTCCCTATATTGTCAGTTTTATTATTTCTTTGAAGTT
ACATGATCTTAATAATCTCAATTTAAATTTTAATTTCATTCAGAATAGCT
TTTTTTCTCCATATCTGAACTGAATATAAATTTTCAGAATAAAGAAAACA
CATCTATTTAGAAGATGTTTTGCTCATATCTTTGAGCACTATCCAGTCTA
AAAGAGAAAAAATAACAAATTAGTCCTAAATAAATCAGATAAATTAAAAA
GAAAAAAAAATCTTGAAAAAAATACACCCTCTTTCAAACACAAACAAATT
ACATTAGTTTGATGCTTGTTTGACTAACAATTTTAATATTAATCATAATG
TTTCTCAGATTATAAACAGAGCAAGGCGGAATCATTTAATGAAAGAATAC
AGAGATGGAAACCCAGAAGCAAAAACTGTTCTTGATGACCTTCAAGAAGC
TTTAGTGGTTGGTGAATCTTTGTGTCTTGTATTTAAAACCTCAACCAAGT
TCAAAAAATATAATCCAAAATGTGTATTTAAAAAAATTCACTTTTTTCCG
TACATAATTTCTAAAATAACCAGCACCGAGATTGCCAAATCCCAATTTCT
TTAGTTTGCTTCCCAATCTTTATACTCTCTTGTTTTAAGGCTGTTTTGTT
TTATGTTTTGACTTCATTAGAGAAAGACTGTATACTTTAAACGATATTAA
TCAAAGATTAGACTAATTTAAACTTCTCCTTAAAAGACACAAAATATACT
GGTTGAATTTATTCTCTCGTTTAAGGCTTTCGTTGCAAAGATAGAAAAAA
CAACAGACCCTGATAAAAAGAATATGCTGAAAAAAATCATGGTATATTTA
AATATGAAATTTTATTCTGATAAGATTTCCTAATTTAAACAATTGGATTT
ATAAAGTTGTTTCTTTGGTGGAGTTGATATTATCTTTAAATTAATTTGAA
GTGGTTCAAACATGTACGCTTATATGTTTTTGGGTAGGAAAATGTGAAGA
ATGCGCAAGGAATTTTGGAGACTGCTATCAAAGAATCTAAAGAAATTGAG
AAATCCACTAATGTAAGTTCGTTAACAATCATATGTTTGATAAAGTTATT
TGCTTTTGCAAATTCTTCCTTATATCCTAAGTTTTTCCTTCAAATTCAGC
ACTCTCATGCTCTGCCTTATTATAGGACATCTCACAATCATAGTTTAAGA
CTTGATGGTCTTCCATTTTATTTGAATTCTTTTCAATAATTTCCCCTACC
ATTTTAGCATAATTTCTTTACTTTTTTTCCAAGAACGTTTTTTTAAATGC
ACCTAACGAAACTGCAAAAATTGAACTATAATGTTAGTTAATACTGATAT
TTATTTATTTTTCATATTTTTTGTAGGAATTACTTGATGCTGCAAATGAT
CCTTTAGCCGATCTCCTCGATAAAAAGGTTAAAATCACTTTTTGACAGCC
GGGTGATAAATAACCGTAAATGTATGAAAGTTTTGCGTTCAGAGGAGGTG
CCTAGGGATATCCTGAGCATAGTGCAGTCCAACTGAATAAATGTGTTTTC
TGTTATGGCAAAATATCGGATGGTAGCTTTAAAGATAAAGCATTGTAGTT
AATAAATATTTGAATTAATTTCTGCCCTGCAAAGGTATAGAGCTCTTTAT
TCATAAAACTTTCTTTACTTTTTGATTAGCAGCAAGAAAGAAATTAACTA
ACAAAATATCTTCATCTTTCTCACTTAAACAGTTTGGTGCAAAGGTGACA
GACTTCAAGATATTCAGTAAACTGACACAATATTGGGAAAATGAATACCA
TGAAGATATGAAAAATCTCAATGTA Coding sequence (CDS) from alignment at sc0000006_pilon:906355..909179- >XLOC_040161 ID=XLOC_040161|Name=XLOC_040161|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1482bp|location=Sequence derived from alignment at sc0000006_pilon:906355..909179- (Clytia hemisphaerica_ch_hm2_pilon)
CTATTTAGATCCACCTGGAACTTGGGTAGCTCTATTTCAAGATTACACAA
ACACTTCAACTTTACACCTCAACTGATATTAATCACAAGAAATCATTCCA
ATATGCGGCGCTGGAAGCAACTTGAAGGAGAAAGTGAACTGAAACTTTAC
AACAGTCTTACCAGAGAAAAGCTATTTAGATCCACCTGGAACTTGGGTAG
CTCTATTTCAAGATTACACAAACACTTCAACTTTACACCTCAACTGATAT
TAATCACAAGAAATCATTCCAATATGCGGCGCTGGAAGCAACTTGAAGGA
GAAAGTGAACTGAAACTTTACAACAGTCTTACCAGAGAAAAGAATCCATT
CATACCACATGAAGGAAAACAAGTTTTTTGGTACAGTTGTGGCCCCACTG
TTTATGATGCTTCCCATATGGGTCATGCAAGAATCCATTCATACCACATG
AAGGAAAACAAGTTTTTTGGTACAGTTGTGGCCCCACTGTTTATGATGCT
TCCCATATGGGTCATGCAAGATCTTACATCACCTTCGATATTTTAAGAAG
AGTTCTTTCAGATTATTTCAACTACGACATTTTTTATGTAATGAACATCA
CTGATATTGATGATAAGATCTTACATCACCTTCGATATTTTAAGAAGAGT
TCTTTCAGATTATTTCAACTACGACATTTTTTATGTAATGAACATCACTG
ATATTGATGATAAGATTATAAACAGAGCAAGGCGGAATCATTTAATGAAA
GAATACAGAGATGGAAACCCAGAAGCAAAAACTGTTCTTGATGACCTTCA
AGAAGCTTTAGTGATTATAAACAGAGCAAGGCGGAATCATTTAATGAAAG
AATACAGAGATGGAAACCCAGAAGCAAAAACTGTTCTTGATGACCTTCAA
GAAGCTTTAGTGGCTTTCGTTGCAAAGATAGAAAAAACAACAGACCCTGA
TAAAAAGAATATGCTGAAAAAAATCATGGCTTTCGTTGCAAAGATAGAAA
AAACAACAGACCCTGATAAAAAGAATATGCTGAAAAAAATCATGGAAAAT
GTGAAGAATGCGCAAGGAATTTTGGAGACTGCTATCAAAGAATCTAAAGA
AATTGAGAAATCCACTAATGAAAATGTGAAGAATGCGCAAGGAATTTTGG
AGACTGCTATCAAAGAATCTAAAGAAATTGAGAAATCCACTAATGAATTA
CTTGATGCTGCAAATGATCCTTTAGCCGATCTCCTCGATAAAAAGGAATT
ACTTGATGCTGCAAATGATCCTTTAGCCGATCTCCTCGATAAAAAGTTTG
GTGCAAAGGTGACAGACTTCAAGATATTCAGTAAACTGACACAATATTGG
GAAAATGAATACCATGAAGATATGAAAAATCTCAATGTATTTGGTGCAAA
GGTGACAGACTTCAAGATATTCAGTAAACTGACACAATATTGGGAAAATG
AATACCATGAAGATATGAAAAATCTCAATGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:906355..909179 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 652-744:94 |
| Aaloc | 601-651:450 |
| Aaloc | 526-600:839 |
| Aaloc | 460-525:1051 |
| Aaloc | 361-459:1468 |
| Aaloc | 265-360:2024 |
| Aaloc | 175-261:2435 |
| Aaloc | 4-174:2826 |
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