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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000012_pilon:2611967..2619735+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040154 ID=XLOC_040154|Name=XLOC_040154|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7769bp|location=Sequence derived from alignment at sc0000012_pilon:2611967..2619735+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTCGGAGCGTTGGCAAACGGTATGGCGGTCACAACAGTCAACCCAGC
CTATACTGCCCATGAGATGCACCATCAAGTCAAAACATCAACGCCCAAAG
TTGTGATCACGACCGCCCATTTATTAGATACCGCCCGACAAGCTTCAGAA
AACAGTTCGATAGAAACAATGATATGTTTAGACGATACGTCAATCTCCGA
CAGCGGCGTCGTCAACATGTCGGATGTCTTACAAAACGGCGACGAAAATT
TCTCAACTGATCTGTCAGCTATCGATCCTGAAAAAGACATTGCTTTTATC
TTATACTCAAGCGGCACAACAGGGCTCCCGAAGGGCGTCATGATCGAACA
CCACGGCATGACGAGTAACGTTTTACAAATCCGTGACTTTTTCGGCGAAA
ACATGCCCAAAGATATCTTAGCCGTTCTCCCTATGTATCACATCTACgga
ttaaattttattttgttgacaAATCTTTACCATGGTAACACCGTACACTC
GTTACCAGGCTTCGACCCAGTGCAATTTTTATCCTGCATCCAAGACAACA
AGGTGAGTTTTCGTCATTCTGAATAACTTTTGCCGAGCTCTCTCAGATAT
CAAATACCAACGACCAGCGGATTTCAAACAGTCTTTTTCTGGACCAATGA
AAGTCATTGTCTTCTTTCGAAATGATTCTCGTTTACCTTCGTTTCTTCGA
TGTATTTTTACGTCTCCTCAGGTTATATTTAAGAGTAAATCAACCTTAAC
CCTGGAGtttgagatgccttggagtttttacaagctgcttaaaactgatt
ggttatttttaaacaatagagatgacgcgttctttagaaaaagtaataaa
gtcgtttgtctcaacatttaacgaccaacagagtcatcaaagaacttgta
aaaactccagcatgaCCCTGGAGTTTCTCAATGCTGGTCAACCAAAGCTC
TGGTCAAGTTAAAATTCCAAATTATGATAAGCATAAGCTGTATAAACTAA
TAAGTTgtatccaaaaaaaaatattacattttAGGTCAGTAGGATCCCGA
TAGTACCTCCAATTGCCTTATTCATGTTGAACAACCCAATGGTGGCAAAT
TACGACTTATCGCACGTCAAATCTGTCATCGTAGGAGCGGCGCCAATGGA
TGAAGAAGCTACTAAAGCGTTTCGAAGAAAATTCCCAACCATGATTCTGC
AACAAGGTATACTTTAATTGGTTGCTTTGATCTACGTTATCGTCAAGATA
ATACCATCTCAAGGTGTTTTGAGTCGATGATATCTCCTCtcagtcaaaaa
aatgtttgatatcCTATATACTTTGTTCCAGTATTGGAGAGATTGACAAA
CTTGGAGAAGTTTTCCCAGTGAAACTGATAACGTTTTGATGAAAGGACAA
GATAGATAGAGCGATTATATGCAAAGTTGATGCGTAGAATATTTAAATTG
CCGTATAATCTTGTCACCTGTAGGTTATGGTATGACAGAGAGCAACATTA
CTCATCTTCAACCTAATGATGAATCTCTTCACAAAGCTGGTTCATGTGGT
CAAACGTTTGCTGATACTGAGTACAAGGTACAATCTCCCTCACATAACTT
CATCATAACTGTTGTCTGTTCGTTGTGCAAAGATGTCCATAATGTGACCC
CCTTTTACAGGATATTCTACCCCAGAAAAGAAAGAtgattgaaattcttt
ttgtcaaacctgtgattattttttaaatgtttttcataaaacacCCCTTT
GAAATAGGTAGGCTAAACAATTACTACAGTGACAAAAATCTCAGGTCtcg
aaaaaatcttaatttttcatcattttcaaattttcaaatatatatgaTAT
ATCGAATTATACTCCCCAAAAGCACCTTTCTAAACGTCGACAATTTACAA
TAGCATTTAAGAAGGCGGTGAGGAAATATTGAAAGAGTAAAGTATTCACA
TACTTTCGAGACAAATTATAATAATCTTTCCAACCAACGGAAAAGAATGC
TTGCTATTTACTAGCCAGAAAAGCCCATTTATTTAGTGGTGGATGTCGTT
ACATTTCTAACATGCCCAAAAGTATTTATAATAGCGGGACTTCTCCTCGC
CTAAAGAACTACGGATATGCAAACAATTAACTCGacaacaaaaagatttt
ttaagtaTACAGTAGGTATATCATATTGACAATGaatatgaaaaatacaa
atgagaatttagatttttttttcgtttttttttcggttgatAATTGCTCG
GTTATTGGAATCGTCTTGTGGAAGGTGTATTGATGAAGAGATTGTCTTCC
CGGGGAGTTGATGGTGGAGATAAGGCCTCGATGGATGTCATTTCAATTTC
GTTGCTAGCCAATGATCTTTCCAAACAGTCATCCTCGATCAGTTGGTATT
CTCCTTCTCCGAGTGTTTTTGGGAAGGTTTGCGGAGATGTTAAATTTTCT
TGATCGTTTTGTGGGTTGACTAGTGTCTTTGGTTGTTGCTCTTTTTGTGT
TTtagtaaatttatttttaggtGGACAGATCCGCCTCAATGACCTCGGGA
GCTGTCGTTTAAGTTTTGAGAGATCCTTTTCCACATCtatgatttcattt
tgaataaaattcatGTTATCTTCATCAGAGAAAGCATCCttttttaacga
tctgcgtcccgattttaagaactttaaataactctttttgtttttaattt
ctttttgtaggAAGTCGAGATTTTCCTCGGCGGAGTTATCTTCCGTAACG
TGCTCTGTTTTCGAggtgatatttttttcttcggCTCTTGTTTGAGAAGC
AGTAACGTCTTTTGTTTGTTTGCGTGGACAAAACTGCAAGGAAGAGCTGA
TTTGGTTCAATCTACCAGTGACAGTGCAGTATCCATTCGTAACAGTGATA
ATGTCAAGATTAGGTTCTTGGAATGCGCCTTGGCTTTGGCAGTTCCCAAC
CTCTTTGTTACTGTCACATTCTGATTCAATTGGTGAGATGAACTTTTCTG
CTTTGTCTGATTTCATCCCTTCTTTATTTGGATCAGCTGGGCTTACATTG
AAAGATGGCAGAATTTGACTTGGACTGTCAGTGGCTATCAGAGATGCATT
TTGAATCATGCCTTGTTCGTTCACAGCTTCGATTAGTTCTGGTTGCTCTT
GGGCTGAAATTTCGCCAATCAACTTAATTGAAGGTTCTTCTGATGTGACA
GTCTCGACGAACGTATTGAGTTTCAGATTATCATTTGCTTCGTTTTCAGT
GTCTTTCAACAAAGCTAAAGGTGTGATCGTCGGCTTATCATCCTTAGCAC
AGGGACCATCACCATCAGAAAATTTATCTTTGCCATCGTTTAAATCGCAA
GCAGAAGAGTCTTCTACATCAATCCGTTGACCATTTGACGCAACAGAAAC
ATTCTCAACAATGCATCGATCAAACTCCTCATGTTTGACTTCTTCGGAAT
AGGTTGTTTCGTTTGCAGTGGTCAAAAGCTCGCTCGAACTTTCTTTCAAC
ATCATCCGTTGGTAATCTCCAGCATCGGAACTTTCAGAAATCTTTTCTGC
GATGACATCATCGTTAGACTGGTCGGGAGAAATTTGCTCAGTAACGATCA
GCTGTTGATCGTTTAACGCGACAGGAACATTTTGAACAACTTTATTTTCA
TCGAAAGATTCCTGTTTGACACTTTCAACACCAGGATAAGTTGCATGTGT
TTTAGTGATGGTTTGGCCTTCAAAAACTTTGTCATCAGATCTGGCAGCTT
TTGTCTGTTCGACAGCCTTCTTTTTCGGAAGAGGTTCTTCAGAGACATCT
TCCATTTCAACATCAGTGACCTCACATTTCGTCTCTTTTCCGTGACGTTC
AAGATGTTTACCAGTGATAGGCTCCTCAGAAAGATCCTCCATTTTAACAT
CATTGTCACATTTCGTCTTTTCTCTGTGATCTTGTTCAACATGTTCTACA
GCGACAGGTTCCCCAGAAAGATCCTCCATTTCGATTTCATTGGGGTATGT
AGGATCGATCATGAATCGTCTCCCGAACGATTCGAATCGATCCCATCGTT
CCTTAGATGCGAAGGGGATATTATCTTCACTTCGATTGAAGTAATCCACT
GCTTGTTGGAAAGTTAGAGAAGCGTAATCTGAAGCCGTGAACAGAGAGGG
GAACATTGATGTCTTTTGGGTGTCTTGCGGCGAGTTGAATGGGTTGGTTG
GTGGCGAGTGGAATAAATTGTTCGGTGCAGAGAAGGGGCTGTTCGGTGGC
GAGATAGTGTTTCCATTCATGATAATGTTGTATTCATGTTCAATGTGATC
GATCATTACTCTCtttttttCTGGTGTTATGAAAGGGTTGTTTTCTACCG
AAGCAAGTTCATGTTGGAGTTGGAGATATCTTTGGTACAAAGGATGAAAT
TGTTCTGCAGACATTTCTTCCTCATCAACTTCCATAGGCTCGACCTGGTG
TAGATAAAAAAGAAGGATTGATTTTTAACGAGCTTGATGGCTAGGACCGG
ATATTGTTAAAGAAgtggaaaaaaaaaagtttgaagaaaaagatctactg
GTCGTTGACTCACAACAGAGTATAAGGGTTTGATGGCTAAGTATAGTATG
GCATAATTATGTGTGTGACCTTTACTTTATTTTAAAGGATGAGTGTCTTA
TGTACCTCGTTATAACAATCTTGGTCGATGTCCATAGGTTCTTCCCCGCA
CTGCATTTTCACTGGTTGTCCACCATAACAGTCCTCGCTTCTCATTGGTT
GTTCACCATAACAGTCCTCGCTTCTCATTGGTTGTTCACCATAACAGTCC
TCGCTTTCTATTGGTTGTCCACCGTAGCTCTCGCTTTCTATTGGTTGATC
GCGAGGATCTATTTCTATTCTTTGTTGCTGTTTGGCAAGctgcaaaataa
aaatgaattatgtCAATTCTTTTGACCTAGCTTTTAAAGTGTGTAAGTTG
ATTgcgagaaaatttcttttttgaccaAGTAAAAAGGATAATCAGTAGCC
CAAGAGCTCAGACGATAAATTATAACAAAACCCTTTTTAATAAAAAGCAC
CATTTCTGTAGTTTAACACGCGGAAGGAAGACTTTACAAACCTCTACTTG
TTCAGCGTGAAAGTCGTAATGAGTTTTTGTTGGTTGCTCTCCATGTGACA
GTGGAGTGGCGACTATATTTTGtctgttgttgttttgttgCTTCGAGGTT
GCGTTGACCGATAGATTCTGTGAACGAGAAATATCTCGAAGCATCATTTG
CATCAGCTGCAATCCTCTTTTGATGGTTCGTGTGGTGTAAAGACCACGTT
TCTGTGATCTCTTGCAAATTAACTTATAACGGCGTCTtgcaagaaaaagt
ttcttgcgGCGGTTGATTTGTTGTTGAACGGTGGCTTTCCTGGCGCATAT
TCTTACGCCGCCAACACGCAAAGGTACTTTGAAGATCTTCTGCTTCTTTT
TTGTTGGTGCCAGTGATTTGTTTTTTGAAACATCCGTTTGGTGCAAGCTT
CTTTTACGATTTTTGGAGTGATTTGTATACATTTTTACCAAATAAAATTC
GTTATAATACTTATGTAATAACTAAAGGACCAGGACATACAAAAAGCTGT
ATGCACTGACCAGGGTTTTAATCCAAAACTGAATCtccaaaatgattttg
aaactgtgtaaatcaaaacaattatttgacgtcactttcttGATAACATT
TGTTCTGACGTTAAAAAATGCACGCTGTTTTATTAGAGCGGTAAAAATTT
AGAACGCCAACTGTTCTCGAGTCTTGTACTCTTTGGATTACGGAATAAAA
TGCGATTCTTCATTAGTAAGTAAGTAACTATTTATTAGGTAGGTTTAGAC
CGGATTCTTATACATCTCAACAAACTCAAAACCACTCCCTCAGCTTGCCA
TAGATTATCCACTGTGTCACAAACCACGCTCTTtagcaaaaagaatcaaa
accgcgtcgctttttgctcaaaaaatgaagaaaacaaaaacgaaagtgaa
cgtgaacgaaaacgaaagcgaatgtgaaagcgaaagcgactgtACATAAT
ATGGACGCTGTAAATTTAGATCTAGATTGTGTATCGTTTATTTCGAGACA
TTCTCTGTATGAATTTGATTAAcataatttatttcatttgcatttttttg
acagGTGGTTTGTTTGGATTCGGGCGAGGCGCTTGGTCCTTACGAACAAG
GTGAAGTTTATACAAGGGGTAGACAGCAAATGTTAGGTATGATATGgttt
acgttttttttaatcCGATTTTCTCCTCCTTTTAGCACTTTTGAGTTTCC
GCCAAATTTCGAGTTCTCCTTAGCTCGGATAAATTCGCAGACTTTCAGAG
ACTTCTTATATTTAACATTCATCCGCCATTCGGTTGAAGAAACTTCTAAA
GCAATACCGCCCACTACCGCCCACCTGGGCAGATCCTTACGGGGCTTGCG
AAGTAACTAGGATATTCTCGGAGATTACCTTCGATGCGACTGCATTACCC
GTTGGGTTCAACCATCTCcaattttttgagtttaaaactGGGACTGGACC
ACTGGAGTCGACAAGTCCCCAAAAGGAAGGGACGGGTATAAGCCCGTTTT
CGGAGtatttcagaaaataaataatCAGAAACCTTTTACGAAGAAAACTG
TAATCTAGTTAAACCGGCTCAAAGATTCTCAACCTCTCGCTTTCAGGTTA
CTTAGACAACGAGAAGGCAACAACAGAAACCATTTTGGAAGACGGTTGGC
TACGCTCTGGTGATTTAGGTTACTATGACGACGAGAATAATTTATTTGTC
ATCGACCGTTTGAAAGAGTTGATCAAATATAAAGGTTTCCAGGTatactt
tgaaaatattttcgcaGCTCACAAAATGACTTTTTCAGCTCATCCGATAG
AGAATTCGCTTTAAAACCGATCTGCGATCACCGCAAACTCAGCGAATGAG
TCGCCTGGATCAGATAATCTGATCTAAGCCCTAAGTTATTTAGAGCTGAG
GGTAGTTGCGCTCCATCCCAACCCCTAATCTAGcgcaaaaatgaaaatgg
cgGCAGACTCCGTCACTCCTGGCTCCACCGATAAACTGACTTACTACTAA
CTCTTTGTATTCCAAAGAATTCCTCATAGTTTAAGCTCCGAGCCAAAGGG
AAATTCCTTAACGCGTTTTTCTGGTGCAGAGAGTTTAACGCCGGTCAGGT
ACATACCAGTTTCACTAGATTTCCATTGCTATAACATATTTGCaaatatt
tgtttcaattccttttaaattttgattttaccaGAAAAGAGATTTCGAGT
AAGTGAGTGACAAGGTTGTTGGTCATTCCAAACagttaaacttttttgtt
tccctCTAGGTTGTGCCTGTAACTTTTGCGGTTGCTGGATGAAAAAGCGA
AATGGTCCACAGTGTTGTACAATATgttctgaaaaatcaaaaaaattcat
agtttcaatgttttttctgtttatttAGGTTGCGCCTGCCGAGTTGGAAG
ATTTATTGATTTCTCACGAAAACATTGTTGATAGTTGCGTGATTGGCGTC
CCATGCGAGAGAGCTGGAGAAATACCACGCGCCTATATCGTCAAAAAGCC
TGGTAGTGATTTAACAGAAGATGAAGTGAAAGATTTTGTAGGTGAACGAT
TTTCTGATCATAAACATCTCCGTGGTGGAGTACAATTCGTAGAACAATTA
CCGAAATCGGCCTCAGGAAAACTCCTTCGTAGAGTGCTTAAAGATCAATA
TTTGGAGGAGAATGAGTAA Coding sequence (CDS) from alignment at sc0000012_pilon:2611967..2619735+ >XLOC_040154 ID=XLOC_040154|Name=XLOC_040154|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2694bp|location=Sequence derived from alignment at sc0000012_pilon:2611967..2619735+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTCGGAGCGTTGGCAAACGGTATGGCGGTCACAACAGTCAACCCAGC
CTATACTGCCCATGAGATGCACCATCAAGTCAAAACATCAACGCCCAAAG
TTGTGATCACGACCGCCCATTTATTAGATACCGCCCGACAAGCTTCAGAA
AACAGTTCGATAGAAACAATGATATGTTTAGACGATACGTCAATCTCCGA
CAGCGGCGTCGTCAACATGTCGGATGTCTTACAAAACGGCGACGAAAATT
TCTCAACTGATCTGTCAGCTATCGATCCTGAAAAAGACATTGCTTTTATC
TTATACTCAAGCGGCACAACAGGGCTCCCGAAGGGCGTCATGATCGAACA
CCACGGCATGACGAGTAACGTTTTACAAATCCGTGACTTTTTCGGCGAAA
ACATGCCCAAAGATATCTTAGCCGTTCTCCCTATGTATCACATCTACgga
ttaaattttattttgttgacaAATCTTTACCATGGTAACACCGTACACTC
GTTACCAGGCTTCGACCCAGTGCAATTTTTATCCTGCATCCAAGACAACA
AGATGCTCGGAGCGTTGGCAAACGGTATGGCGGTCACAACAGTCAACCCA
GCCTATACTGCCCATGAGATGCACCATCAAGTCAAAACATCAACGCCCAA
AGTTGTGATCACGACCGCCCATTTATTAGATACCGCCCGACAAGCTTCAG
AAAACAGTTCGATAGAAACAATGATATGTTTAGACGATACGTCAATCTCC
GACAGCGGCGTCGTCAACATGTCGGATGTCTTACAAAACGGCGACGAAAA
TTTCTCAACTGATCTGTCAGCTATCGATCCTGAAAAAGACATTGCTTTTA
TCTTATACTCAAGCGGCACAACAGGGCTCCCGAAGGGCGTCATGATCGAA
CACCACGGCATGACGAGTAACGTTTTACAAATCCGTGACTTTTTCGGCGA
AAACATGCCCAAAGATATCTTAGCCGTTCTCCCTATGTATCACATCTACg
gattaaattttattttgttgacaAATCTTTACCATGGTAACACCGTACAC
TCGTTACCAGGCTTCGACCCAGTGCAATTTTTATCCTGCATCCAAGACAA
CAAGGTCAGTAGGATCCCGATAGTACCTCCAATTGCCTTATTCATGTTGA
ACAACCCAATGGTGGCAAATTACGACTTATCGCACGTCAAATCTGTCATC
GTAGGAGCGGCGCCAATGGATGAAGAAGCTACTAAAGCGTTTCGAAGAAA
ATTCCCAACCATGATTCTGCAACAAGGTCAGTAGGATCCCGATAGTACCT
CCAATTGCCTTATTCATGTTGAACAACCCAATGGTGGCAAATTACGACTT
ATCGCACGTCAAATCTGTCATCGTAGGAGCGGCGCCAATGGATGAAGAAG
CTACTAAAGCGTTTCGAAGAAAATTCCCAACCATGATTCTGCAACAAGGT
TATGGTATGACAGAGAGCAACATTACTCATCTTCAACCTAATGATGAATC
TCTTCACAAAGCTGGTTCATGTGGTCAAACGTTTGCTGATACTGAGTACA
AGGTTATGGTATGACAGAGAGCAACATTACTCATCTTCAACCTAATGATG
AATCTCTTCACAAAGCTGGTTCATGTGGTCAAACGTTTGCTGATACTGAG
TACAAGGTGGTTTGTTTGGATTCGGGCGAGGCGCTTGGTCCTTACGAACA
AGGTGAAGTTTATACAAGGGGTAGACAGCAAATGTTAGGTGGTTTGTTTG
GATTCGGGCGAGGCGCTTGGTCCTTACGAACAAGGTGAAGTTTATACAAG
GGGTAGACAGCAAATGTTAGGTTACTTAGACAACGAGAAGGCAACAACAG
AAACCATTTTGGAAGACGGTTGGCTACGCTCTGGTGATTTAGGTTACTAT
GACGACGAGAATAATTTATTTGTCATCGACCGTTTGAAAGAGTTGATCAA
ATATAAAGGTTTCCAGGTTACTTAGACAACGAGAAGGCAACAACAGAAAC
CATTTTGGAAGACGGTTGGCTACGCTCTGGTGATTTAGGTTACTATGACG
ACGAGAATAATTTATTTGTCATCGACCGTTTGAAAGAGTTGATCAAATAT
AAAGGTTTCCAGGTTGCGCCTGCCGAGTTGGAAGATTTATTGATTTCTCA
CGAAAACATTGTTGATAGTTGCGTGATTGGCGTCCCATGCGAGAGAGCTG
GAGAAATACCACGCGCCTATATCGTCAAAAAGCCTGGTAGTGATTTAACA
GAAGATGAAGTGAAAGATTTTGTAGGTGAACGATTTTCTGATCATAAACA
TCTCCGTGGTGGAGTACAATTCGTAGAACAATTACCGAAATCGGCCTCAG
GAAAACTCCTTCGTAGAGTGCTTAAAGATCAATATTTGGAGGAGAATGAG
TAAGTTGCGCCTGCCGAGTTGGAAGATTTATTGATTTCTCACGAAAACAT
TGTTGATAGTTGCGTGATTGGCGTCCCATGCGAGAGAGCTGGAGAAATAC
CACGCGCCTATATCGTCAAAAAGCCTGGTAGTGATTTAACAGAAGATGAA
GTGAAAGATTTTGTAGGTGAACGATTTTCTGATCATAAACATCTCCGTGG
TGGAGTACAATTCGTAGAACAATTACCGAAATCGGCCTCAGGAAAACTCC
TTCGTAGAGTGCTTAAAGATCAATATTTGGAGGAGAATGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012_pilon | genome | sc0000012_pilon:2611967..2619735 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1057-1347:7479 |
| Aaloc | 913-1056:6699 |
| Aaloc | 829-909:6155 |
| Aaloc | 727-828:1476 |
| Aaloc | 553-723:1035 |
| Aaloc | 1-552:1 |
|
