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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:1020108..1022905+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040151 ID=XLOC_040151|Name=XLOC_040151|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2798bp|location=Sequence derived from alignment at sc0000006_pilon:1020108..1022905+ (Clytia hemisphaerica_ch_hm2_pilon)
ataaaattattttcaccgTTGACCATTCGTTTCAGTTTATCACTTGgtta
tttttcaggattttcctACTTCCTCTCACTGTTTGGACGATGGTTTGCTG
ACTCCATATTCGGACGTTTCCACGCAATATTTGGTTCCGTTTTGTTCTAT
AATATTGGCAATGCTGGTATTGTCGTCATAGCTTATATTATGAAGAAGGA
AAATTATGATTACTATCCCCATTTCTTCATCATAtcacttatttttattt
cactcgGAGCGTCAGGAATGAAAGCAAACATCTCAACATTTGCTGCAAGA
CAAGTGATTCACTTTGGTGATATACACGTCCGAAAACTGTTCAATCGTTT
TTACTGGTTAATTAACTTTGCAGCTGTAATTTCATGCACATTCGTTGCTT
ATTTGCAGTTACAAGATTTCTTATATGGGTATTTACCTGGACTTTGTGGC
ACAGTGTTGGCTACTATAATATTTATCTGCAGTAAACGATATTTTGTGAT
CAAAAGAAGTAACGGCAGCCATTTAACAGATATATTTAACATTGTGACTC
AATCAATAAAGCGTAAATACAAGTTTCAGAAATCAATTTCTGAGGAGATT
CCAAAGCACACAACTTTGGATTTGCTAGAGTATGGACATATTATGTTCGG
AGGGTCATATTCAACAGATCAGATTGATATCGTTCGATCATTTTCGAGGA
TTCTGCTTATCTTTATGACGTTGTTGGTCTACTGGACAATATATTTTCAG
GTAAGGGATTTTCTCCTAATTCTTATTGAAAATCTCTGTTTTAGCCTTCT
TTGTTAAAAGTTCATAGTAATTTTGTAAAAGTTCCGATAGGAAAGATAAA
GCAAACAATCAAATCACTTAGAGAATTTCAAACTGctgagaatttcaaaa
ttctttcccagttagttttatttttcttggaGACAAGGAAAGGATTAAAG
AGAAACACATGCTACTTcgatttcaaataatttcaattcAATGTTAATTA
TGTTTCTTTATCTTTAGATGCCGTCGGTCttttttttCCAATCGCATTTT
TTCGATTTGAAAATTCGAGGATTCCAAATACCGGCTTCTGCAATGAACTT
ATTTGACACTTTTTCCATTCTTTTGATGATACAAATCATGGAACATTTGG
TATACCCTTTCTTTCAATAcgtcaacattcatctaacaaCTCTACGTAGA
ATGGGATTCGGATTTTTCTTGGTAACTCTTTCAATGGTATACGCAGCTCT
TATTGAACCATATCGGAGACAGAATGTGGATTTTCAAAACACGAATATTA
TAATGAATACAACGTTTCATTGTTCAAATTATACCGTATTATGGCAAGCA
CCACAATTCGTTTTGATTGGATTTAGTGAATTCTTCACCAGTATTTCCGG
TAAGtttttttGTAGGAAAGAAAAGAATAAGAGAGGGATAGGTTATCAGA
TGTCCCAGTGCTAAAGTTGATatagttttctttcaataaaagtacATGAC
TTAAAGTTTCGTGCTTTTGGGTGAAATGTGCTACGGtttttttATGCAGC
ACAGTGGCCACTTCTCCCTTGTATATTGCgctgttctttttttaaatcca
tacagggggtgaaCGTACCTTTTCAATCCAAAAATAACTCTTGAAAATGT
GTGATACCCTCTGGAAAATATGCTAAAataattggaaaaattcttcttta
tgGGGTGGACGAATTAAAATCAGATTTTTACACCTTAGAAgtttttgaat
attattttcgccctggaaaaatgaaaaaagactttTCTTAGAACTCCCCT
GAAACTTCTTTTTaggattaccccctggaaatgtatggagataaaatgga
atggccaaTTATTTACCGTTGAAAATTAGGTTCTAGTTGTGTAAAAGAAC
TATGTACCACTGTTACTGTTTAAcaatattttaggtttttgacTCTAAAC
ACGACTAAAGAAAAGCcagtatttcattttttgtgactTTGAGGGACTTG
GAAATGAGCCAGAGTTGTTCTTAATGAAAGATCGTAAGCTAGCACTTGAG
TTCAAATAGCACTTTTCTTGTTTTCGTATTCGTAAAGTTCGAGACATCTC
TGTCTCACAGCACCGATAGCCccggggatagaaattctattgttccaagc
ttaaaaaatccagttgggatggttttggattacaatttttccatttaatt
tcgaatggggatgaaatcaaagtcaatttgcCACTAAGGGTGAAACTGTA
CGGTATTTTTCCACAGggaacgaaattttggccaaattttgtAGTGTGGC
GGGGGTTCCACCGGTTCTGTGACACGGAGAATGAAAGGTAACAATATATT
TCCCTTTCCTTTTTCAGGTTTAGAGTTCGCTTATTCTCAATCACCTCGTT
ATCTTCAAGGGATCGTCATGTCATTATTTCTGACTACCTCTGGTCTTGGT
GCTTTCTTGGGTGCATTGATCGTCAAATTGACGTCTGTATACAAAAAGGA
ATGGCTGTGTGAAAACATTAATAAATGTTCGTTAGAATATTATTACTATC
TTCTGGCTGGTTTATCGCTACTAAACTTATTAATTTTTATGGTTGTTTCG
AAAAACTTTTCTTATTCCGTACCATTTATTGGGACTATTTCACATTCTCG
ATCGTCCAGATCCTTGGCCACACCTACTGATATTTCTGATATCACAGATT
TAGCTTCGGATGCAAATGGCGTAAGTTCACGGATTGATTTGAGTAGACAG
TCATCTTTTGAGGATGTCGATTCAATATCTCGCTCAAGTAACGACTGA Coding sequence (CDS) from alignment at sc0000006_pilon:1020108..1022905+ >XLOC_040151 ID=XLOC_040151|Name=XLOC_040151|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3126bp|location=Sequence derived from alignment at sc0000006_pilon:1020108..1022905+ (Clytia hemisphaerica_ch_hm2_pilon)
ataaaattattttcaccgTTGACCATTCGTTTCAGTTTATCACTTGgtta
tttttcaggattttcctACTTCCTCTCACTGTTTGGACGATGGTTTGCTG
ACTCCATATTCGGACGTTTCCACGCAATATTTGGTTCCGTTTTGTTCTAT
AATATTGGCAATGCTGGTATTGTCGTCATAGCTTATATTATGAAGAAGGA
AAATTATGATTACTATCCCCATTTCTTCATCATAtcacttatttttattt
cactcgGAGCGTCAGGAATGAAAGCAAACATCTCAACATTTGCTGCAAGA
CAAGTGATTCACTTTGGTGATATACACGTCCGAAAACTGTTCAATCGTTT
TTACTGGTTAATTAACTTTGCAGCTGTAATTTCATGCACATTCGTTGCTT
ATTTGCAGTTACAAGATTTCTTATATGGGTATTTACCTGGACTTTGTGGC
ACAGTGTTGGCTACTATAATATTTATCTGCAGTAAACGATATTTTGTGAT
CAAAAGAAGTAACGGCAGCCATTTAACAGATATATTTAACATTGTGACTC
AATCAATAAAGCGTAAATACAAGTTTCAGAAATCAATTTCTGAGGAGATT
CCAAAGCACACAACTTTGGATTTGCTAGAGTATGGACATATTATGTTCGG
AGGGTCATATTCAACAGATCAGATTGATATCGTTCGATCATTTTCGAGGA
TTCTGCTTATCTTTATGACGTTGTTGGTCTACTGGACAATATATTTTCAG
ataaaattattttcaccgTTGACCATTCGTTTCAGTTTATCACTTGgtta
tttttcaggattttcctACTTCCTCTCACTGTTTGGACGATGGTTTGCTG
ACTCCATATTCGGACGTTTCCACGCAATATTTGGTTCCGTTTTGTTCTAT
AATATTGGCAATGCTGGTATTGTCGTCATAGCTTATATTATGAAGAAGGA
AAATTATGATTACTATCCCCATTTCTTCATCATAtcacttatttttattt
cactcgGAGCGTCAGGAATGAAAGCAAACATCTCAACATTTGCTGCAAGA
CAAGTGATTCACTTTGGTGATATACACGTCCGAAAACTGTTCAATCGTTT
TTACTGGTTAATTAACTTTGCAGCTGTAATTTCATGCACATTCGTTGCTT
ATTTGCAGTTACAAGATTTCTTATATGGGTATTTACCTGGACTTTGTGGC
ACAGTGTTGGCTACTATAATATTTATCTGCAGTAAACGATATTTTGTGAT
CAAAAGAAGTAACGGCAGCCATTTAACAGATATATTTAACATTGTGACTC
AATCAATAAAGCGTAAATACAAGTTTCAGAAATCAATTTCTGAGGAGATT
CCAAAGCACACAACTTTGGATTTGCTAGAGTATGGACATATTATGTTCGG
AGGGTCATATTCAACAGATCAGATTGATATCGTTCGATCATTTTCGAGGA
TTCTGCTTATCTTTATGACGTTGTTGGTCTACTGGACAATATATTTTCAG
ATGCCGTCGGTCttttttttCCAATCGCATTTTTTCGATTTGAAAATTCG
AGGATTCCAAATACCGGCTTCTGCAATGAACTTATTTGACACTTTTTCCA
TTCTTTTGATGATACAAATCATGGAACATTTGGTATACCCTTTCTTTCAA
TAcgtcaacattcatctaacaaCTCTACGTAGAATGGGATTCGGATTTTT
CTTGGTAACTCTTTCAATGGTATACGCAGCTCTTATTGAACCATATCGGA
GACAGAATGTGGATTTTCAAAACACGAATATTATAATGAATACAACGTTT
CATTGTTCAAATTATACCGTATTATGGCAAGCACCACAATTCGTTTTGAT
TGGATTTAGTGAATTCTTCACCAGTATTTCCGATGCCGTCGGTCtttttt
ttCCAATCGCATTTTTTCGATTTGAAAATTCGAGGATTCCAAATACCGGC
TTCTGCAATGAACTTATTTGACACTTTTTCCATTCTTTTGATGATACAAA
TCATGGAACATTTGGTATACCCTTTCTTTCAATAcgtcaacattcatcta
acaaCTCTACGTAGAATGGGATTCGGATTTTTCTTGGTAACTCTTTCAAT
GGTATACGCAGCTCTTATTGAACCATATCGGAGACAGAATGTGGATTTTC
AAAACACGAATATTATAATGAATACAACGTTTCATTGTTCAAATTATACC
GTATTATGGCAAGCACCACAATTCGTTTTGATTGGATTTAGTGAATTCTT
CACCAGTATTTCCGGTTTAGAGTTCGCTTATTCTCAATCACCTCGTTATC
TTCAAGGGATCGTCATGTCATTATTTCTGACTACCTCTGGTCTTGGTGCT
TTCTTGGGTGCATTGATCGTCAAATTGACGTCTGTATACAAAAAGGAATG
GCTGTGTGAAAACATTAATAAATGTTCGTTAGAATATTATTACTATCTTC
TGGCTGGTTTATCGCTACTAAACTTATTAATTTTTATGGTTGTTTCGAAA
AACTTTTCTTATTCCGTACCATTTATTGGGACTATTTCACATTCTCGATC
GTCCAGATCCTTGGCCACACCTACTGATATTTCTGATATCACAGATTTAG
CTTCGGATGCAAATGGCGTAAGTTCACGGATTGATTTGAGTAGACAGTCA
TCTTTTGAGGATGTCGATTCAATATCTCGCTCAAGTAACGACTGAGTTTA
GAGTTCGCTTATTCTCAATCACCTCGTTATCTTCAAGGGATCGTCATGTC
ATTATTTCTGACTACCTCTGGTCTTGGTGCTTTCTTGGGTGCATTGATCG
TCAAATTGACGTCTGTATACAAAAAGGAATGGCTGTGTGAAAACATTAAT
AAATGTTCGTTAGAATATTATTACTATCTTCTGGCTGGTTTATCGCTACT
AAACTTATTAATTTTTATGGTTGTTTCGAAAAACTTTTCTTATTCCGTAC
CATTTATTGGGACTATTTCACATTCTCGATCGTCCAGATCCTTGGCCACA
CCTACTGATATTTCTGATATCACAGATTTAGCTTCGGATGCAAATGGCGT
AAGTTCACGGATTGATTTGAGTAGACAGTCATCTTTTGAGGATGTCGATT
CAATATCTCGCTCAAGTAACGACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:1020108..1022905 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1135-1563:2370 |
| Aaloc | 751-1131:1018 |
| Aaloc | 1-750:1 |
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