XLOC_040150 (mRNA) -

Overview
NameXLOC_040150
Unique NameXLOC_040150
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000006_pilon:998919..999846-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040150 ID=XLOC_040150|Name=XLOC_040150|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=928bp|location=Sequence derived from alignment at sc0000006_pilon:998919..999846- (Clytia hemisphaerica_ch_hm2_pilon)
GCATGCGATGCCAAAACGTTGACAGACGTGACAGGAACTTTTACATCTCC TGGATATCCACAAAACTACCCATTCGGTGACACGTGTCAATGGAAAATCA AAGTCGCACCCAACTTGAAAATCAAATTACAATTCCCAGATATGGATATC TTAAGTTCTGACAGCAGTGAAGGTGCATGTGGTACGAACCGTATCGCTGT TGTTCATTCGTCTGACCCACGAGATCCACCATTACTGTATTGTAACTCAC ATCCTCCACCAATCGAAGCACAGGAGTATGGGAACGAATTAACAGTCACT TTCACTTCTACAAAGACTGAAGCAAAACAAAGCAAAGGTTTCAGTGCAAA TTATACAGCTTATGACCCAAACCCACCTCCACCGACCACCACTACAACAA CCACCACAACAACAACTGCTAACACAACCACAACAATCACACCTTCAAAC ACAACGACTCCAGCAACCTCACAAGGTTTGTAATTCGATCGTCAAATGAA TAAAACTTTATTTCATCCGATATCGTTCATTATTTTTCGGCAAAGTTATT ACTAAGGTTCTTTCCATTCAATAAGATATAATCGTCAACCATGCTTAAAA AAAGTTTTTAATCGATATTGATTTCAATGACTTTATGGGGTTCTTACTTT TAATGGCCTGATTTCTTTTCTCAAAAACTTGTTACAAACTTTGAATATAT ATGGATAAAATGTTTAAATGCAGACACTCTACATTTAACCTCATCTTTTC AGCACCTGTCACTCAAAAGCCTCAATCGAAACTTTCGAAAGGAGTCATTG CTGTCATTTGCATCCTGGTCATTCTGGTTGTACTTTTGATCATCGATATC ATTTTGTACCAGAAAGATATGGGCGTTATTTACTCCATCAGACGGGCGTG TGGTGGTTACGATTCTGTCTCCACTTAA

Coding sequence (CDS) from alignment at sc0000006_pilon:998919..999846-

>XLOC_040150 ID=XLOC_040150|Name=XLOC_040150|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1302bp|location=Sequence derived from alignment at sc0000006_pilon:998919..999846- (Clytia hemisphaerica_ch_hm2_pilon)
GCATGCGATGCCAAAACGTTGACAGACGTGACAGGAACTTTTACATCTCC
TGGATATCCACAAAACTACCCATTCGGTGACACGTGTCAATGGAAAATCA
AAGTCGCACCCAACTTGAAAATCAAATTACAATTCCCAGATATGGATATC
TTAAGTTCTGACAGCAGTGAAGGTGCATGTGGTACGAACCGTATCGCTGT
TGTTCATTCGTCTGACCCACGAGATCCACCATTACTGTATTGTAACTCAC
ATCCTCCACCAATCGAAGCACAGGAGTATGGGAACGAATTAACAGTCACT
TTCACTTCTACAAAGACTGAAGCAAAACAAAGCAAAGGTTTCAGTGCAAA
TTATACAGCTTATGACCCAAACCCACCTCCACCGACCACCACTACAACAA
CCACCACAACAACAACTGCTAACACAACCACAACAATCACACCTTCAAAC
ACAACGACTCCAGCAACCTCACAAGGCATGCGATGCCAAAACGTTGACAG
ACGTGACAGGAACTTTTACATCTCCTGGATATCCACAAAACTACCCATTC
GGTGACACGTGTCAATGGAAAATCAAAGTCGCACCCAACTTGAAAATCAA
ATTACAATTCCCAGATATGGATATCTTAAGTTCTGACAGCAGTGAAGGTG
CATGTGGTACGAACCGTATCGCTGTTGTTCATTCGTCTGACCCACGAGAT
CCACCATTACTGTATTGTAACTCACATCCTCCACCAATCGAAGCACAGGA
GTATGGGAACGAATTAACAGTCACTTTCACTTCTACAAAGACTGAAGCAA
AACAAAGCAAAGGTTTCAGTGCAAATTATACAGCTTATGACCCAAACCCA
CCTCCACCGACCACCACTACAACAACCACCACAACAACAACTGCTAACAC
AACCACAACAATCACACCTTCAAACACAACGACTCCAGCAACCTCACAAG
CACCTGTCACTCAAAAGCCTCAATCGAAACTTTCGAAAGGAGTCATTGCT
GTCATTTGCATCCTGGTCATTCTGGTTGTACTTTTGATCATCGATATCAT
TTTGTACCAGAAAGATATGGGCGTTATTTACTCCATCAGACGGGCGTGTG
GTGGTTACGATTCTGTCTCCACTTAACACCTGTCACTCAAAAGCCTCAAT
CGAAACTTTCGAAAGGAGTCATTGCTGTCATTTGCATCCTGGTCATTCTG
GTTGTACTTTTGATCATCGATATCATTTTGTACCAGAAAGATATGGGCGT
TATTTACTCCATCAGACGGGCGTGTGGTGGTTACGATTCTGTCTCCACTT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040150XLOC_040150-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000006_pilongenomesc0000006_pilon:998919..999846 -
Properties
Property NameValue
Aaloc478-651:175
Aaloc1-474:929