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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:979946..987633+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040149 ID=XLOC_040149|Name=XLOC_040149|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7688bp|location=Sequence derived from alignment at sc0000006_pilon:979946..987633+ (Clytia hemisphaerica_ch_hm2_pilon)
atttaTCATGAGGAAGATATGTTTAGTTtagataaaaaagaagaattatt
cAAGGTTCGAATCCACGTGGAAGCCACAGGCGACCACATCACgctcaaga
aaatcaaaaatgatctTAAGATTAGTCAACTGAAGGAAAAGATCGAAGGA
TTTGTTGGCATCCCAAGGTACGTTACCGTCAAATTcaactttattttatt
tgtaaGAACTTTAAACTCAATTTAACACAGAAAATTAATCTAAAATTGAT
GACAATCagctttaaaaaacaaaaaaaaataaacacgaAATAAACACATA
AATCTTTTAATCCTATAGGGTAAAATTAGTCCAGATGAAAAGTGAGAAAA
ATTGTAAGCAATAGAAAGAGTTACTTCAGAGGGTAATTTTGTTTCCTGCA
TTTTGAGAAGATTGAGTTGATTTGACCAAACAACATGTGATGGAAAATTT
CGTCTCCGAGATCTCTCTCCCAGAGCTTTAGAGTGGAGTATTGGAAATCG
Aagtaacgaaagtgccaaatgaatttcaaattttgaaatttgaaaagaag
taaaaattttcaaatttcaaaatttgaaaaatgaaaaatacaaaaaaatt
ttgattttcaaattttgaaattaaaaaaattgtttataccCCAATCGACG
TAATAAAAGTGCCAAAAAGAGTTTCTAAATTTTAAGTATGAataaattgg
gctattccatttttaaactgtacaggggtattgacgaaattttcaagggg
ggtctaagccttgattttccaaggggtttttgttcctttttcagcttttc
caagggggttattcaAGGTTTATAGGGGGCATCAGTTGTTTTCcagccct
ttttcacaaaatttagttttccagAGGGTTTGTATcccaatttccagggg
ataatttgctattcaatatttccaggggggctagtgaaaaaagttcgtca
atacccctgtataattttttttagaatagccCATTAGAAGGTTAGCAATC
TGTGTTGACGTCAACAGGAGGTTCACTAAAAGTGCAATAATCACCTAAAG
CCCTGCAATTCGAGTGATTCTATCTTTGAGagaattgattggttgattaa
cGTCACGTGACCCGTCAATAGACTTTTTGTTCCTAGTATACAGAAGTGTG
ATTTGCGCACACTGTAACATCATAATTTGACCTTAAGAACGTTTAGGTAA
TCAACTTTACCATATAAGGCAAAGAAACCACGTTATGGGGGTTTAGAACG
ATGTTTACTTTCGACTAATATAGCCTAATATCTGAGACAATAGGCAAAAA
ACAGGTGGATATTTTGTCCCTTCAATTTCACGAATATGTTTTTTGAAAGA
TAATTCTATTAGTttgcttcttaaatttcagataaatgaaaaaagtgtga
caaatataatttttaaaatttaaacctttcattggcacttttattacaac
gagctttgtccaattttaagcaatactaaaaattttccatttttcatttt
ttcaaattttgaaatttgaatatttttacttcatttaaaatttcaaaatt
tgaaaatcatttggcactttcgttactTCGATTATTGGAGATGACGGGAT
ATCgtcaatgataattttaatcAAATTCTCTGTTCGAAATGTTGTTACAT
TCATTCTGAAAGAACGGTTTTTTctttcgatgaaaatttgaacattATTT
TGTGAATTAACTACTTTATCCTTGATCGTATTGGTTGAAATTCTGTCCAA
TCCGTTTTCTAATTTATAATGTTGTTTCCCTTCAAATACAATCACATAAG
ACATTGGTTTGAGAACTTTCTCCAGGAAGTCAAATAAATGATAGTCGTTC
CATTGCCAGGACGGATCATCCAGTAAACCGTTAGTTTTATACTGAACCAC
TTTTGTCcaaaaatacattttcaaaTCGTCAgcgaaaagaatatttttta
cgAGCACCAAATTCTTTAAAACGATCGTAATGAGCATTCTTGAGAACACC
CATTAAATCTTTATGCATGTGTTGACTCAGCGATCTTTTCCTTTAACGAA
TCGATATTGAAATAACGATGTCTTGGCATCCAGCTCTTGACAACTAAACA
CATCGTATCAATTGTGCCACAAAGAAATACCACATTATAATTTTGTTCAT
TCTCCGCGGATTGCAACTTCATTGATAATAGCTCTTTTTCTGGCCTGCCA
AACCATGAAGCCCAATAGAACATGAAATAAATCAAAGTATGTTGTATTTT
CTCTTCGTTGCCACTTTCTGGAAGTGTTGACAAAAACTGCATTATATTAT
TAGTTTCCATTGTTGGATTGTTTGGCTGGTGGTTTCTATGTCATCAAAAG
CATCCAGAAAATTTGATTCTGTCAACTGAATCAGCGAATTCTTTTTCACT
GAGTACATCCAGACATTAGTACATTTTTCAAGTAAAAGCGATCTTGTTAA
CACTGTTAGTTGGTCAATCAAAGTGTTTGTGTATCTTCTAAAGTCGTGAT
TTCGATAAGGTTCTGGTCGATTTTCAATATCAGGAAAAAATATGACGTTC
CTTCTTTTGATACAAGGTGAAGCAATATCATTCGCCCTGCCAGCTGCAGT
TATATTGGTGTCCATCAAATAGAATAAAAGAATCCATTTTTTGACTCCCA
TTAGACATTAGACCAAAGATCGCATTgaacaaattgaaacgaaacgaaaa
atctcaaaaactgcttaacttccaaacaaaaatagcttcaaaaaagctat
aaaagggaaaTGGCACTACTTCTGTTGTAAAATCCAAAGAAACATTTTGA
ATCGTTTGAATGTTGTACGTTTCTGCTTCTTGGTTTAAAAGACCTCCTGG
TTATAAGAAATGTCAATAAAATATGAAATCCATTCTTCTTCTTAAGCTTG
ACAATCAATATCTCCCCATTGTTTTACATCTCCTACTGATGAAATAGCTT
CTCTTTTAAATATTTAAGTGGATTAGGtttttttCAATAAGTAgtaattt
gaaatgttattTGACATTTGCTATGCAAAAGAATGAATCACTGTAATTTT
TGCCCAATAGGAGAGATGAGCAGCCCAGTTGAAGTAGGAGAAATAGTATA
ACTTGTACATTAACCCTTAGACCCCGCAAAGGACGCCAATAGgcgtccaa
aacaagccaaaatactgagtctcagtcttgaggccatagctcctgaccac
ttgatttaaaggggcataaaccgagtgcttttagaaagagtatgaaAATA
GCTTTTCAAtggtgaaaaatttcaactttttcaaaaaaaaacagcgcGCA
CAAAAGGTTAATGTGtaatgttaaaaacataactAAATGTAGCATAACAT
cccattaaaggttttatttttaagccaTGTGTCCACTCCGGAAAGTTTGC
AACGGATCGGTACggattgaaaagaagaagaaaagcgATCTGAACCGTTT
TGCAAATTCCACttcggatttttaaaaagtagattCTTTCTGTTTACAAA
TTTCATACAAAAGAAATCGAATTATTTTAATCTCCTTCAGGTCGAAGATA
AtccttagaacaatagaaaacaCTCCAATCCGTACCGATCCGTTGCAAAC
TTTCTGGAGTGGACACATggcataagtgttcccgtttcatatcagacaca
tatttcatatcaggacactGTCTGCCTATTCTTAatttgtgctgatataa
gcaaaaaattgtttttcttttcctctttctgaccaatcttgctccacatc
cgtgtcaatccaatgtgaaaaagcttgtaaattaaaattgataagtaagc
aaacgattCACTCTTACTTAAAAACAGAACCTTTAAAGATTTTCAATCCT
TAAAGTATTATTTAGTAGctcttaaatttcaaaagaagggTTCGAAATTT
CGGTCGAAAAATGATTTCGTTTTTATAATTATTTCAAACGagaaagtatt
tttttggaaatattatataaaatctaatttttacGACTTGTCGATTCTAG
TAATGTTTCAACTTTGTGAATAATTCTCTTTCCTTTCCAGTTATTTGTTA
CAATTGTTCTATTTGGACGAATGTGCTTTAGTGGATGAAAAATCATTGAG
TTATTTTCACATCTTACCTGATGCCAGAATCAAAGCTCGCGTATGGAAAA
CGAATCGTAAGCTGGTGGCCGCTGCACGATATGGATCCTGGGAAGGTATG
AGTTTAAACCCTAAAAGGCTAGAGGGTTTGTAAGGTTGAAAAAATCTCGT
TATTTTTCTTGATATCTTGCTTTGTctcttaaagccttaaaatctcatgt
tgatttttttttatttcatacaGTAGAGAACaaactacaatcaaggtcat
aatggtatttgagaaaaaagggaaatccaccgggaagtttttgaaccaca
atcgatttgtaactGCTCTAAAGTAGgatggaagggtagagttttaactc
tgagtaggaccttaggatctgattatccaaaagttcaaaaatagtccaat
aagactcagaatatagcctggaagtctgccaacccctcccaaattgaaat
attcgattaaattaaaaagatagccaaaaatcgactttctcgccagaact
ttaaatcttgaaaaacgttaaaatagccaaaattctcaatatattatgac
cttgattgtataaAGGTAAAAGATTAATTCTAAAAACTTGGTTCGTTTTC
TGTGTTACAATCAAAAGATAACAATTCATCGTAAAAAGAATGTTTAATTG
TTAATCTTAGGTTCCAGATAGACGGGGGTTTCGAATAAACGGtaggtttg
aaaaattttcaaaattttaataaacggggtggGACCTAGTTGCCGGCGGG
GTTGGAAGTTGTAATTACGAAAACCCAAAACTACTGTAAATAAAGGCTAA
TATCAGGCGGAgggggggtttgaaaattttcgaaaaattaacaagcgggg
gggcgtttatttggaacctatgAGTACCCACCTTGCAATAGGAAATCGTT
TTTACGTTACAATCCTTTCTGGCAGAGGCACTGTCAACTAGCTATCTATT
GGTTTAGTTACACGcattaatatttcttttgtagATGTATTGGCTGAGCT
GTATCTGCCTgcaacaaaagaagaaatttccaAAGCTTCGCTTCACACCA
GTCATGATTTAGATAGGCCCTTAACTGCTTTGTTTATATCATGTTTCCAC
GGCAATGATGCTGTCGTAGAGAAGTTGTTGCAACAAGGTGTGGTGAACGA
ACGGAAACCATTGTTATCAGGGCGTCATGCTGTACAAGTGGCGGCAACAC
GCCACCATGCTAGATGTGTCGAGCTGTTACGTAAGTTTAGATTGTTTAGA
GGTTGCTCATTGTAAGAAttatctacacgctttttttcataagaatggtG
ATCTTTTTATTTCAACATAGGTATTCTTAACCTTTTCGGGAAAAtgatcc
tgaaatattcttttggtattcttaggtttgtatccaaacccagctaaaat
ctagcatgtaatacatacctcaagcaaaaattttgcatttttatgGAACT
TTCGCTGAGCATTGCTAGGAAATAAATTTGCAATCTATGGTAAGGagctc
aaaaaatggcattttcagGTTCAATTGCCAAATTCCGTGAAGgtggtatt
cttagcatattcttaacttttttcgccAGTTTCATCATAAAtactcttat
aaagtatattcttataaaaaaaagcgtgtacggCTTAACGTCGACAGTGT
GGAAAAACAGATCACTTAGTAAGACTTAATGACTTTCCGTGGCTAAGAAT
AGAAATGAGAAAACCTTTCAAACaatattgaaatttctttaaagaatttt
aGCAAGTCTAAAAACAATATGTTGCAAAATCCCTTACAGTTCGTCTACAT
TCTGAttcttcattaattttttcagtcTGACCATAAGTTGACTGGCTGCA
AAATGACTGCTTCATAAGAATTATTTCCAATTTTAGTATTCCCACACACT
GGTTGTCAATccaatgataaaaaaatcacttcACGTTATTACGGAATCCC
TGAGTGACCACAATGACAACAATTTCACGCAATAATATAAATCACTcaca
acaatatttcaaactttcacaacaatatttcaaactaTCGACACcaatat
caaaattatcacaacaatatcaaaattatcacaacaatatcaaatttctt
acaacaGAATATCGAaattccaacaacaataccaatattctcacaacaat
accaatattctcacaacaaacaataTGAAAAAGCCGGAAAAAATCTAAAG
TGCTCTCTCCTCAGTGATTTTTTGTTAATGATGAAAAATCTTCCGTAAGG
ACAGGGCCTTAAGTTCCAACACATTTATTACAATAAAATTACAGAGAGTC
TGGTAATAGTCGCCATAGAGTTCCGTGGAGAAATCCGCGATGGCAACTAC
TGCATGGAATGTGGGGAGGAGACTgcacccccgggggggggggggggtac
tagggcaaaatgggttacgatatgctccgctggtcagggtaccttttttt
aacctccacgagtcccaggtagggtcgcaaaaacaccaaaatataaaaat
cagtccctcgtagggtgcctatttttggataatttggggaaaaagtagaa
aatttgagaacattttggaatttcagtcccattcagggtcacttttttcg
caaatttcgagtcccacgtagggtccatttttcgaacctcagcggagcac
ccccgtcggtcgacaagggtagtaccccccccccccgggactgcACCACA
GTCACCTTATTTGCAAGTATTTTCTATTCGATCTTAGAAGCTGGTCCATA
TACCGTCCATAAAGCTTATGGAACTTATTGTTTCTCTTGAAATTGGAAAC
TTTTGCAGCAGTACACCAGATGGTTACCAACTCTATACAATAGTTAACTT
TTTTCCTATCGTTTATAGGGGACGACCACCAGCCTCTCTGTAATTTTATT
GTAATCATGCGGCCCATTCAATCACCACGTGAAATATTTAGCTACATGTA
GACACCTCGTAGTCTTATATGTGTAGAAATTTCAAGCCCTATTATCATGG
AAGATTCTTCATCGCCAACGAGACGTaaaaaaaTCACTGCGAGAGAGAGC
ACTTTAGATTTTTCTGAGTTTTCATAttgttgtcaaaattttgatattgt
tgtgagaatttggatattgttgtgagaatatttatattgttgtgagaata
ttgatattgCTGTGAGAACTTTGATATTGTTATGAGAGTTTGAAATATCG
TTGTGAgagtttgaaatattgttgtgggaaATTGTTGTCGTTGTGGCCGC
TCAGGGCTTCCGTACGTTATATTCATCCTCAATTCTATTTTACAGTGAGA
CGTAAATTCCGACCATACGAGTGGAACCACGAAAGAAATTCTCTCATGAA
TTGGGAGTTACAAGACCGCATTAAAGCAACTCTCGAACGAatcgaaacga
aacgaaaaatCTCCAAAACACAACATTATACGCGTTTAACAGAGTCACAG
AAATACGATtcttttttatccacgtggtacTGTGGCGAATATGGAAAGAT
TTATTTGTGTGTTATTTTGACAGGAGAAACGAATACTAAGACAAATCCAA
ATccaatcaaatataataaaCCGGTCTTTAGACCTTAA Coding sequence (CDS) from alignment at sc0000006_pilon:979946..987633+ >XLOC_040149 ID=XLOC_040149|Name=XLOC_040149|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1722bp|location=Sequence derived from alignment at sc0000006_pilon:979946..987633+ (Clytia hemisphaerica_ch_hm2_pilon)
atttaTCATGAGGAAGATATGTTTAGTTtagataaaaaagaagaattatt
cAAGGTTCGAATCCACGTGGAAGCCACAGGCGACCACATCACgctcaaga
aaatcaaaaatgatctTAAGATTAGTCAACTGAAGGAAAAGATCGAAGGA
TTTGTTGGCATCCCAAGatttaTCATGAGGAAGATATGTTTAGTTtagat
aaaaaagaagaattattcAAGGTTCGAATCCACGTGGAAGCCACAGGCGA
CCACATCACgctcaagaaaatcaaaaatgatctTAAGATTAGTCAACTGA
AGGAAAAGATCGAAGGATTTGTTGGCATCCCAAGTTATTTGTTACAATTG
TTCTATTTGGACGAATGTGCTTTAGTGGATGAAAAATCATTGAGTTATTT
TCACATCTTACCTGATGCCAGAATCAAAGCTCGCGTATGGAAAACGAATC
GTAAGCTGGTGGCCGCTGCACGATATGGATCCTGGGAAGTTATTTGTTAC
AATTGTTCTATTTGGACGAATGTGCTTTAGTGGATGAAAAATCATTGAGT
TATTTTCACATCTTACCTGATGCCAGAATCAAAGCTCGCGTATGGAAAAC
GAATCGTAAGCTGGTGGCCGCTGCACGATATGGATCCTGGGAAGATGTAT
TGGCTGAGCTGTATCTGCCTgcaacaaaagaagaaatttccaAAGCTTCG
CTTCACACCAGTCATGATTTAGATAGGCCCTTAACTGCTTTGTTTATATC
ATGTTTCCACGGCAATGATGCTGTCGTAGAGAAGTTGTTGCAACAAGGTG
TGGTGAACGAACGGAAACCATTGTTATCAGGGCGTCATGCTGTACAAGTG
GCGGCAACACGCCACCATGCTAGATGTGTCGAGCTGTTACATGTATTGGC
TGAGCTGTATCTGCCTgcaacaaaagaagaaatttccaAAGCTTCGCTTC
ACACCAGTCATGATTTAGATAGGCCCTTAACTGCTTTGTTTATATCATGT
TTCCACGGCAATGATGCTGTCGTAGAGAAGTTGTTGCAACAAGGTGTGGT
GAACGAACGGAAACCATTGTTATCAGGGCGTCATGCTGTACAAGTGGCGG
CAACACGCCACCATGCTAGATGTGTCGAGCTGTTACTGAGACGTAAATTC
CGACCATACGAGTGGAACCACGAAAGAAATTCTCTCATGAATTGGGAGTT
ACAAGACCGCATTAAAGCAACTCTCGAACGAatcgaaacgaaacgaaaaa
tCTCCAAAACACAACATTATACGCGTTTAACAGAGTCACAGAAATACGAT
tcttttttatccacgtggtacTGTGGCGAATATGGAAAGATTTATTTGTG
TGTTATTTTGACAGGAGAAACGAATACTAAGACAAATCCAAATccaatca
aatataataaaCCGGTCTTTAGACCTTAATGAGACGTAAATTCCGACCAT
ACGAGTGGAACCACGAAAGAAATTCTCTCATGAATTGGGAGTTACAAGAC
CGCATTAAAGCAACTCTCGAACGAatcgaaacgaaacgaaaaatCTCCAA
AACACAACATTATACGCGTTTAACAGAGTCACAGAAATACGATtcttttt
tatccacgtggtacTGTGGCGAATATGGAAAGATTTATTTGTGTGTTATT
TTGACAGGAGAAACGAATACTAAGACAAATCCAAATccaatcaaatataa
taaaCCGGTCTTTAGACCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000006_pilon | genome | sc0000006_pilon:979946..987633 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 571-861:7398 |
| Aaloc | 325-567:5087 |
| Aaloc | 169-321:4042 |
| Aaloc | 1-165:1 |
|
