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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000174_pilon:648963..650682- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040108 ID=XLOC_040108|Name=XLOC_040108|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1720bp|location=Sequence derived from alignment at sc0000174_pilon:648963..650682- (Clytia hemisphaerica_ch_hm2_pilon)
TTGCCGAGTTTTCAAGCAAATGCAGATAAACATTTGGACATTCGTTCACT
TCGAGTTTTAATGAATTTGATCGAAAATAAAAACTTATTCTTTCGAGATA
TGGAATCAATAGGATTTACAGCTCCCGACAAAGATCCAATGGTCGCTGTC
AGTGTAAAGTATAACGGAAGTCCGTTCGATTATCCTGCCTGGGTAAAACA
TGAGAAAATTATAATAGGTGACCATCATTCATTTTCAGACGATTCAAGAG
GAAAGACTGTTGTGGGATGTAAGGACAAAGCATGGCACACCCATGAGGTC
ATCCTACAGCCTGCCGCAGCTAAGAACTCCGTCCAGCTCAAGCAAAGAGA
ACGACACACCCGAAAGATATACTGGCAACACATGGTCAAAAATTTCAAAA
AAACAGACACTGTCAAGGATGCTGCATTCGCGTTCAGGTCTCTATACGGA
TTCCATGTACGATGTCCTGTGTGCGACGACGGCATCCTTCACTGGAAAAA
GGAACGCCCTGAGGAAATTTTTGCAACAATCCGCTATGTCACCGCCAGAA
GATTGCACGGACAAGAGCAGCACGAAAAGCTCTTCTCCAGACCCGTCGCT
GGAACGGCCCTCAGCAAGAAGCTCGCAAAGTTGGGCTATCAAGTGGAATC
CCCTTGCGGCATCTCAACCATTAAAGCGATCCAGAGGGGTATCACACACG
CTGGCGTACAAGCAATATTTCCGGACACAAAATATTAAGAATTGCAAACA
TTACGATTATCTTATTGCAACTGACACTGAATTACAACGATTGGAAAACT
TAGTTCCATCAAACCAAATAGAAACAATTAAAAAACAAATGTTTAACCAG
CATGTTGCTGACGAATTTGTACCCTATTCTGATATGATTAGTAAAGTAGA
AGATTATGACGAAACAGAAGGAAAAGTATTTTCTAAATTTTGGACTTCTT
TTTTAACCACGGTTGCGTCTCAAAATGGAATGACTATAGAAGATATGATT
TCCGAAATGTTTTCTATTTTGTCTTTGGAAAAACCTAAAAAGTCTACAAT
ATTTTTGTTGGGTGCTAGTGATTCGGGAAAATCATTTTTGGCTAGATTGC
TAACGTCTGTTTGGCCGAAATACGACGTGGGTGTAATTGCTACAACATGT
GGTAGACCTTCCGACTTTTGGCTCCAAGATTGCCTCAATAAGCAAGTATA
CAGGTCTGAAGAAGTTAGATTTGGCGATCAGGACGTGTTCCAACGGTGGA
AACAACTTATGGAAGGGAACGATATGTTGGAGACGCAAATTAAATACGGA
TCGTCGAAATTTATACCGAGAAGACCTGGTGTTTACACTGCCAATGCCGA
ATACAAGGAACAAATAACTGAACTTTTTGATCAGGAGTTTCAAACCGTAC
AAAATCGTTGTCTATTACTTATGTTAAATCAGAATTTAACGACTATCATA
CCACCTTTTGTATTAGAATATGTAAGCAAACGGAATGCAAAAGCAATGAA
ATATTTGTCGCGAGTCAGTCGGCACGCAACGGAACAGTCGGCTGGTACGA
GTACAATATACGCCCTTATGAGCATCCAACCACCACCACCCCAATGCAAA
CCCAAACCCAAACCCAAACCCACAACAACAACAAAAAGAAATTCAACCAA
GTCAAGAGAGCGAGATCGACAGTTTTTTCGAGGAAAACATCAGCTACATA
TCACTGATGACAGACGATGA Coding sequence (CDS) from alignment at sc0000174_pilon:648963..650682- >XLOC_040108 ID=XLOC_040108|Name=XLOC_040108|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3440bp|location=Sequence derived from alignment at sc0000174_pilon:648963..650682- (Clytia hemisphaerica_ch_hm2_pilon)
TTGCCGAGTTTTCAAGCAAATGCAGATAAACATTTGGACATTCGTTCACT
TCGAGTTTTAATGAATTTGATCGAAAATAAAAACTTATTCTTTCGAGATA
TGGAATCAATAGGATTTACAGCTCCCGACAAAGATCCAATGGTCGCTGTC
AGTGTAAAGTATAACGGAAGTCCGTTCGATTATCCTGCCTGGGTAAAACA
TGAGAAAATTATAATAGGTGACCATCATTCATTTTCAGACGATTCAAGAG
GAAAGACTGTTGTGGGATGTAAGGACAAAGCATGGCACACCCATGAGGTC
ATCCTACAGCCTGCCGCAGCTAAGAACTCCGTCCAGCTCAAGCAAAGAGA
ACGACACACCCGAAAGATATACTGGCAACACATGGTCAAAAATTTCAAAA
AAACAGACACTGTCAAGGATGCTGCATTCGCGTTCAGGTCTCTATACGGA
TTCCATGTACGATGTCCTGTGTGCGACGACGGCATCCTTCACTGGAAAAA
GGAACGCCCTGAGGAAATTTTTGCAACAATCCGCTATGTCACCGCCAGAA
GATTGCACGGACAAGAGCAGCACGAAAAGCTCTTCTCCAGACCCGTCGCT
GGAACGGCCCTCAGCAAGAAGCTCGCAAAGTTGGGCTATCAAGTGGAATC
CCCTTGCGGCATCTCAACCATTAAAGCGATCCAGAGGGGTATCACACACG
CTGGCGTACAAGCAATATTTCCGGACACAAAATATTAAGAATTGCAAACA
TTACGATTATCTTATTGCAACTGACACTGAATTACAACGATTGGAAAACT
TAGTTCCATCAAACCAAATAGAAACAATTAAAAAACAAATGTTTAACCAG
CATGTTGCTGACGAATTTGTACCCTATTCTGATATGATTAGTAAAGTAGA
AGATTATGACGAAACAGAAGGAAAAGTATTTTCTAAATTTTGGACTTCTT
TTTTAACCACGGTTGCGTCTCAAAATGGAATGACTATAGAAGATATGATT
TCCGAAATGTTTTCTATTTTGTCTTTGGAAAAACCTAAAAAGTCTACAAT
ATTTTTGTTGGGTGCTAGTGATTCGGGAAAATCATTTTTGGCTAGATTGC
TAACGTCTGTTTGGCCGAAATACGACGTGGGTGTAATTGCTACAACATGT
GGTAGACCTTCCGACTTTTGGCTCCAAGATTGCCTCAATAAGCAAGTATA
CAGGTCTGAAGAAGTTAGATTTGGCGATCAGGACGTGTTCCAACGGTGGA
AACAACTTATGGAAGGGAACGATATGTTGGAGACGCAAATTAAATACGGA
TCGTCGAAATTTATACCGAGAAGACCTGGTGTTTACACTGCCAATGCCGA
ATACAAGGAACAAATAACTGAACTTTTTGATCAGGAGTTTCAAACCGTAC
AAAATCGTTGTCTATTACTTATGTTAAATCAGAATTTAACGACTATCATA
CCACCTTTTGTATTAGAATATGTAAGCAAACGGAATGCAAAAGCAATGAA
ATATTTGTCGCGAGTCAGTCGGCACGCAACGGAACAGTCGGCTGGTACGA
GTACAATATACGCCCTTATGAGCATCCAACCACCACCACCCCAATGCAAA
CCCAAACCCAAACCCAAACCCACAACAACAACAAAAAGAAATTCAACCAA
GTCAAGAGAGCGAGATCGACAGTTTTTTCGAGGAAAACATCAGCTACATA
TCACTGATGACAGACGATGATTGCCGAGTTTTCAAGCAAATGCAGATAAA
CATTTGGACATTCGTTCACTTCGAGTTTTAATGAATTTGATCGAAAATAA
AAACTTATTCTTTCGAGATATGGAATCAATAGGATTTACAGCTCCCGACA
AAGATCCAATGGTCGCTGTCAGTGTAAAGTATAACGGAAGTCCGTTCGAT
TATCCTGCCTGGGTAAAACATGAGAAAATTATAATAGGTGACCATCATTC
ATTTTCAGACGATTCAAGAGGAAAGACTGTTGTGGGATGTAAGGACAAAG
CATGGCACACCCATGAGGTCATCCTACAGCCTGCCGCAGCTAAGAACTCC
GTCCAGCTCAAGCAAAGAGAACGACACACCCGAAAGATATACTGGCAACA
CATGGTCAAAAATTTCAAAAAAACAGACACTGTCAAGGATGCTGCATTCG
CGTTCAGGTCTCTATACGGATTCCATGTACGATGTCCTGTGTGCGACGAC
GGCATCCTTCACTGGAAAAAGGAACGCCCTGAGGAAATTTTTGCAACAAT
CCGCTATGTCACCGCCAGAAGATTGCACGGACAAGAGCAGCACGAAAAGC
TCTTCTCCAGACCCGTCGCTGGAACGGCCCTCAGCAAGAAGCTCGCAAAG
TTGGGCTATCAAGTGGAATCCCCTTGCGGCATCTCAACCATTAAAGCGAT
CCAGAGGGGTATCACACACGCTGGCGTACAAGCAATATTTCCGGACACAA
AATATTAAGAATTGCAAACATTACGATTATCTTATTGCAACTGACACTGA
ATTACAACGATTGGAAAACTTAGTTCCATCAAACCAAATAGAAACAATTA
AAAAACAAATGTTTAACCAGCATGTTGCTGACGAATTTGTACCCTATTCT
GATATGATTAGTAAAGTAGAAGATTATGACGAAACAGAAGGAAAAGTATT
TTCTAAATTTTGGACTTCTTTTTTAACCACGGTTGCGTCTCAAAATGGAA
TGACTATAGAAGATATGATTTCCGAAATGTTTTCTATTTTGTCTTTGGAA
AAACCTAAAAAGTCTACAATATTTTTGTTGGGTGCTAGTGATTCGGGAAA
ATCATTTTTGGCTAGATTGCTAACGTCTGTTTGGCCGAAATACGACGTGG
GTGTAATTGCTACAACATGTGGTAGACCTTCCGACTTTTGGCTCCAAGAT
TGCCTCAATAAGCAAGTATACAGGTCTGAAGAAGTTAGATTTGGCGATCA
GGACGTGTTCCAACGGTGGAAACAACTTATGGAAGGGAACGATATGTTGG
AGACGCAAATTAAATACGGATCGTCGAAATTTATACCGAGAAGACCTGGT
GTTTACACTGCCAATGCCGAATACAAGGAACAAATAACTGAACTTTTTGA
TCAGGAGTTTCAAACCGTACAAAATCGTTGTCTATTACTTATGTTAAATC
AGAATTTAACGACTATCATACCACCTTTTGTATTAGAATATGTAAGCAAA
CGGAATGCAAAAGCAATGAAATATTTGTCGCGAGTCAGTCGGCACGCAAC
GGAACAGTCGGCTGGTACGAGTACAATATACGCCCTTATGAGCATCCAAC
CACCACCACCCCAATGCAAACCCAAACCCAAACCCAAACCCACAACAACA
ACAAAAAGAAATTCAACCAAGTCAAGAGAGCGAGATCGACAGTTTTTTCG
AGGAAAACATCAGCTACATATCACTGATGACAGACGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000174_pilon | genome | sc0000174_pilon:648963..650682 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1201-2490:1291 |
| Aaloc | 769-1197:1721 |
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