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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000290_pilon:254411..261407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040078 ID=XLOC_040078|Name=XLOC_040078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6997bp|location=Sequence derived from alignment at sc0000290_pilon:254411..261407- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGATATCCTTATTCGCTACTTAAAGCGGTAAGTCCATTCAAAATATC
AGACAGTAAAGTGTCCGGCATTATCAATTTGTTTTTTTATTGTTGGGTTC
AAAACTAATGGCGAGCCATGGTTACATTTTCAAGGTTGATACATTTCAGC
AACAGGAATCGAGAATTGAAATAAAATAATTTTGATATTTATGCTGGTTA
GCATTGCTTTGTTGGTTTAAAGTATTGGGGTAACATTATAGCATCCTATA
ACGCTGGCGATTGTTTTCTTTAGGCGCTTACGTAAACGGTCGGTAATGTC
GACGGATGATACCTCAAGTAATACCTTACACGTGTCTAGACGACAAATAA
TGTTTAAGAATCTCCATTTATTACAGTAAAATGTTTTTTAATGAATAATC
GAATCTTAAATTTGTTTTGTGCAACAGACCTACAACACAAATCTTGTCAG
AATTCCAGAGTGACCTGATTTCTATAGATACAAGAAAGAGAAAGTTTTCA
TTCTGATATTATTTTTGATCGCGTGAGAAATCAAGACCTCAGGCGTAATT
ATTTCTTTTCATAGTTGCTCCGTATCTAGAATACACAAATAAAGATGCCT
GAAAGATATGGCACATCTAAATGTTGTGCTTTATGAGAAATTAAATGAAT
ACGGATCACTGACTGATTATGTGCTAAGCGATTGCCTAACAGATAGGCAG
TGATAGACGCGAAGAGACGTCGAAATTAAAAAAAATCCTTATCCATCATT
AAGTATTGAAATGAATACAAGAAAAAAAGCCATTATTAAATGCTTTTGAT
AGATGGGCGCAATTAAGGTAACAAAATTCTAAACAATACAATCCATTAAA
AAACGTAAATGACATTAAGCATCTACTATCTCGTTGACCAACCAGACCGA
CCAACACAAAAAAATGTGTTGCTCAAGCTAATAGCGAAAAACGCAACTCA
ATCAGATCACTTTGAACCGTCGCGTAGTGAGGAGCTCTGTCATTTTTCTA
TCATTTTTGCAAAAAGAGATAAAAACGCAACGGGACAAGTAGTAAAGCTT
CAGGAAATATAAGACATTTTAGATTTTTTGGGGGTTGTTTTTTCAATTTA
TCGATGTATTGAAAATGGTCAGCTTTGCACTTGCAGAATTAATGGCTGAC
TTGACATTGCTTTTGGTACCAAATCATGAACGTTAATTGGCTGCTTAATG
TGAGTGAATTTGTGAGTTCATGTATGGAACACACACAGGTACTGTCGGTA
AACATGGATAGGAGATTTAGAGGGTGGTCAAAGGTTTCCATGTGAAAAGT
ACTGTACAATCTGCTTTCCATTTCTACATATTACCGGCAGTGTGAAACTT
TCCTCGAAACAACCCTTGATTAATTTTCAATGTGTTTGCGAGACTTTTTA
AAGGAGGAGCATATATATGTGTTATCATTTTGCCTTGTCTGTATTCCATA
TTTTTGCACAAGTCAGGCGAGCGACAAGGCAAAATTTAACCGCAAATCAA
AATGAGCGAATTTCATTCAGAAAATTTAATCAACTAATATGGGCCATTGG
GTTGATTGTACATTCAATTGAAATGGATTAAAACGAAGCCTTCATCTTTT
TTACATGATTGCAACGGAAAGAAAGAGAGAAAAAGGCACAAGAAAGGATC
AGGTCGGCTTGTTAGATTGTCGACAGTTTAATCGAGCCTGTAGATTCCAT
TAACCAAAATGTCCTTAAGGACGGACAGACTTTGTTATAAAAGATGAAGG
TTAAAATGCGATCAGCTCGACTTAACTTAATATGATGTTAAAATTCTTAA
AGTTTTAAAACACTTTCATTCAACTAAATGATATCGGAAAGAAAAGTAAA
AATTGAAAAAAGTTCATCAATAAAACAAATGGCGCTTGAAAAAATTCCCA
CTGATTAGTCGAGAAAAAAGAATTCTTCCTTGATTTCTTAACCAGCCCCT
TGCTTATAGCTTTAAATTAACTATTACTCAGGTCCCTCCTCTTGGTTGAT
TGGCTTTTAAACTGTCTTAATTGAAAATGACCGTGTTTTCAATTGGTTCC
AATAAATGTTCTTGAGAGCTTCCCCAGTAAAATGGCGTTTGAATAAACTA
ATTTTGCATAACTAAAATTCTACTGATATCAATATACTGTTGGACTAATT
TTTTATTTTATTTTTATTTTTCCGTTCTTAGATATTCGGATTATTCATCA
TCACGTGTTGTTACGAGCAAAAGGCATTAAGTTTTACATACCGTAGAACC
GGCAACCAACATCAACTACTACCCGACTCAACGGACGATACCCTGACAGC
AAACTTAGACATTGATACAAGTGAAGACTTATCGAGTACATCATTCATAA
AGAAACTCGATTCCAACATTCACGAACTCGAGAAAGACACTTCAACAAAA
GATCTAGATTTAAAAGCGATGGAAAACCTCGATAAAACCGACGAATCAAC
GAATCAACGAAATACGCGACATAATACTGAGAAAGATCAGAACACTCAAG
GCATGAGCACTAAAAAGACACGCGTTAATAAAGCAGATCGTGTTGTACCG
AGCACGGTTCACGCTATCTTAAATGCACCAACGAACACAATGAGAGCTTA
CTTACGTTCGAAGACTGGACTCTATTTAAGGATGGGACCCAATGGTGAAT
TGGGTGGCACAAGAAAAATGAAAGATAAGCATGGTAAGAGAAATTTCTTT
TTGCTTTCAGAATTTCGAAATGGGAGTGGGCGCTTTCACTATGTCGTAGA
CATACAACTTCACTTCAGACAATTAAGTATACGATGCTCTTTTTTCGACA
TATTGCTTAAAGAAAAACAATCGCATAACTTTACGTCATTTGGTCAACCC
ATGGTCTAAAGTCAGACTATTGGTTTGCACTTGAGTAAAAGTGGCCAAAA
TCGTATACGAATTCGAGACCTTATAGATTACGTGATAACCTGAACACACA
TGGCAATTTTCCAATTTCTCATCCATTTTGCAGGGAATTAAAAATCACAA
GCTTTCTCAGCTATCCGTTAGCTCTTTTTATTGTAAAATAGAATCGAAAA
TTCACATGGGCTAGTCGCTTTATTTGAAGTGCGAGACGCCTGTTGCTAAC
TCCAAAAGCTTTAAACGTTGTATGCAAAGCAATGGGATTTTTTTCTTCTC
TCGTTTTGTACTTGTAAAAATACCTATACGTTATGCTATAAACAGGGTTT
TAATCCTAATAATCTGTCAAGATCATTCTGCTTTACAAAATTATGCTAAG
AGCTCCCTTGTTTCGTCACCTTTTCTCTTTTATTATGGCTTGTTTTTCGA
AGCCTTGTCCTTGTCGTAATCGCGTTTAAATTGTTGTCGATGTTATTGAC
AGGCGGGCGGATTCAGAGCACAAGATTCTCACATAATAAAACAAGGCGGA
AGCCCCTTCTTGCTATCCTACTTTCCTGCTATGAACAAAAATAGATTGCT
TTCCAGAAGGAAGAGAATTTAAGAAACTCGCTCAGTTCCAACTCAAAGTT
TGGTTTCATTCCAACTAATACCATTAAAATACTCAATTATTAGGTCTCAG
ATTACTAATTATATTTTTATCGACCAAAATTTCATTTGCATCTTAACCAT
TTTTACAAATGAAAAACAACAACAACAGCATTCTGGATTACAGCAGTCTG
GGAACATTGGATTAAGATAAGTTCTCATCGAATCAAAACAAGTGTATTCT
TGTAAAAGGGTGTTAACCGCATAATTGAGAAAAGATATCAAATCAACAAT
TCTTTTTGCAATATTCATTAAATTGAATTTTAACGTCAAGCTTTCCTGGT
GCGCTCCCATGCTCTTCAACTTTAAGGGTCAATAGCTGTATTGAAGGACT
AAGAATTTGACAGCATCAGCTGTTTTGTAGCCATGGTTACATATTTGGAT
CAAACAATTAGCGAAAGGAAATTTTTGCGGTGTCATAAACTGAAAAAAAT
CAATTGAATCAAGTATGATAAATTTTATTCTACGCCAAATATGATAAACG
AATTTACGCATCTAACTAGGTTGGGGTCAACACATGGCAATTATCAAAAG
CAATAGGAGCACATTTCCAAGAGGAAGAAAGTGAAAAAAATTGGCGAATG
GACTTGCTAAATTGCGCTCTATTGACGCATTAGCGAAATTTATTTCTTGG
CGAACGGCTCAATTTTTGTTTTTCTCGAAACTACGTGCATTTTTTATCTT
ATCAGGACATTGTTTGTGAGTATTTTCTGAGTTTTTGATTACCTTTGCTA
TTTACTCTGATTAGGTACAGGCATTGATAACAAGATAGGAGGGTAGTTAA
ATTAGCGCATTTCAGTGAGAAATATTGAGATTACAAACGTTTCAACCAAA
ATAATGAGACATAAGAAACGAGGGGAGAAAATTACAACGCTTATAAATGC
AGAACAGTGTTTAAGCGAATCAACCAAAATTAATAGACGTCAAAATCGCA
TTTTCTCGCTTTGATTCTCGCAGAGGCACGTTTCCGCATCAAACTGCGGG
CATAAAGCGTTTAACAAGCTAACTGTGTTTCTGACTGCGCAAAATCTGCT
TAAAAATCTATGCTAGTCGCGCGCACATCTTTTTATTTAACGAACCAAGG
TCAAAGCTCTATATATTAAAACTTGCAATTGTTGAAATTCATTATGATAG
AATCAAAAGGCGAGGGAGTTTGAAATGCGGAAATTGATCCATCGAGTCAA
TTCAAAATTGGAGCGAAAACGGAGATTAGTACACTTAGGCATCAACAGAG
GTCGAAAAAGCCGGGTTTTTTAATGCAAAAAAAGTGTGTCAGTTTATGCA
AGAGTACAAAAGCTTTATCGTTACATAATATCAACTTTCGGAATTGAAAT
ATGAAGTAATAGGTTAAGGCGTTGCCTCTTCAAATTAGCGAGAGATTCCT
TCCTGGCATTTTAAAGCAAGCTGTGAGATAGCTGAGAAAATTAGAAATAG
CATAGGAACAAAGCGAATTCTGTTTTACAAATGATAAAGTGTATAAAAGT
AAGAGAATGAATGAGCAAAAATTATTTATTAAAAAGTAAAAATTGCAAAA
TTACTACTAGGAATGAAAAGAAAAATGAACTATTTTAATTATCAGGGTTA
TTAGGATGCAGCCAATACTCCTGTGCTGTGCGGTAAACATCAAACAGTTT
TGCATTTCGAAATAATCAAACTGCAAAAAGTAGTGCATCATTAATCATTT
TATGAACATGCTACCTTGGGTTTTCTCTTTTCTCGACGCATATTTCTCGA
TAATGACACCCCAAGCAAGCCTTTCTTGCCTCGACGAAAATAATACATCA
ACATGTTAATAAATCAAAAATGGGAATATTGTAAAATGCTAAATATTTAT
CAATTAGAATTAAAACTTCCAGCTAAGAAAGGAAAATTTGACATACTTAA
TGATGAGTATTAGGCCATAAGATCACACATTTAGAATTCAAATAAAAATA
GTGAGTCCCATTATTGGATATTGTCAAAATTTCAGATCTGACATCACCAA
TAAGCTTATCATTATCAGAAACTCAAAAAAATTCAAAATCTCTCAACTTG
AAAAGTCAGATCAAATCAGGAGATAATGACAGAGGACGTTTGATAAAAAA
GTGATGAGTGGAAATGTCAAATATCTGTCCATTGAAAATGACCATTAGAC
TATATATTTTGTCATTTTTGGAATTAATTCACAAATTTTATCTAACACAA
AAATCAGCATTTTTCCCAAAGACATTTTCAACAGCGCAAGTTTATTTATT
TCAGTCAGTGATAATCATCAAAACTTAATTGTGTGACGAGTGTTGACGTC
AGTAGAATTTGAATTTTGCGCAATATATAAATTCCCAAAAAGATTATCCT
CATTTCATGCTTTTATCGGGAAAATCCCAGAACTTTACTTCAATTAGAGC
TAGAAAGGACAAGAAAAAAATCTTTAAACTGAAAAATAGATATACATAGT
AGGCCAAGCTACCTGCCAGCACTGACAGTACACAAAAGGCACTGATTAAG
TCCTAACAAGCAACTTTATTTTATCATTTATCGCACGTCTCCTTTTGGGA
TTAATCTTGACGCACTACCAGTTTTTAAGATCTAAATCGATAATGTCGTC
ATTTTGAAGACGACAATATATGCGCTTTTCTGAATCAACAACAAACATGT
TTCTAAGACTTTCTTCTTCCTGAGACAGATAAATAATATCTTACTCATCT
TTCTTCTTCAGTTATATTCGTCATTGAGAGGATGTCAAAAGACGCGGTCC
GTCTGAAAGGTGAAGCCGCCAATAAATACATCTGTATCAATAAGAGGAGA
AAGCTATTCACAAGGGTAAGTCGAAGGAAACTCAATTCTTTTTATTTCAG
ATAGAAATGTGATGCAATTACCAAAAATTACATTGCCAGGGAAAGTTTCG
ATAGTAAAAAGAACAAACAAGGCGTTTACAGGTTTGGAAATACCGAAAAA
ACGTAATGAAAAAATTAGCGCGTCATTATTTTGTAAGTTTCAAACAACAA
GTATGGATTAGACATTTTCCAAAAATTAAAATGTGACTGGATTATACTAA
TGATTCAGAATTGCCAAGTAATATTAATGACAATAATTTCATTATAAAAT
ACTCATTGAATATGAAAAGTCTTAATTCGATGAGACCTCATCATAAACAA
CAAAATTCGATTAAAATGTATTTTTTTGGTTTGGCTGACTAGGTCAATTA
AGTATGTCTACTACTGAGCAGTCTTAATGTAATCAAACAACAACATTAAT
TTTCTTCTGTCTCTTTTTTTTTCAGGAGAAACCAAATTCCAAATGTCTGC
TAAGGAGCTACTTAGAGGAAAATCATTACGAACTATTTTGGTCTTACATG
TATTCTAAAAAGACTGATGGCGAGAACGGTTGGTTCTTAGCTTTAAAAAG
GAACGGTAAAATCAGGAAACCAGCTAATACAAAAATCGGAGACCGACAGA
CTATGTTTTTCGTGCATCGAGCAGATGATATTCCAAGCGGATCTTGA Coding sequence (CDS) from alignment at sc0000290_pilon:254411..261407- >XLOC_040078 ID=XLOC_040078|Name=XLOC_040078|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1716bp|location=Sequence derived from alignment at sc0000290_pilon:254411..261407- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGATATCCTTATTCGCTACTTAAAGCGATGCGATATCCTTATTCGCT
ACTTAAAGCGATATTCGGATTATTCATCATCACGTGTTGTTACGAGCAAA
AGGCATTAAGTTTTACATACCGTAGAACCGGCAACCAACATCAACTACTA
CCCGACTCAACGGACGATACCCTGACAGCAAACTTAGACATTGATACAAG
TGAAGACTTATCGAGTACATCATTCATAAAGAAACTCGATTCCAACATTC
ACGAACTCGAGAAAGACACTTCAACAAAAGATCTAGATTTAAAAGCGATG
GAAAACCTCGATAAAACCGACGAATCAACGAATCAACGAAATACGCGACA
TAATACTGAGAAAGATCAGAACACTCAAGGCATGAGCACTAAAAAGACAC
GCGTTAATAAAGCAGATCGTGTTGTACCGAGCACGGTTCACGCTATCTTA
AATGCACCAACGAACACAATGAGAGCTTACTTACGTTCGAAGACTGGACT
CTATTTAAGGATGGGACCCAATGGTGAATTGGGTGGCACAAGAAAAATGA
AAGATAAGCATGATATTCGGATTATTCATCATCACGTGTTGTTACGAGCA
AAAGGCATTAAGTTTTACATACCGTAGAACCGGCAACCAACATCAACTAC
TACCCGACTCAACGGACGATACCCTGACAGCAAACTTAGACATTGATACA
AGTGAAGACTTATCGAGTACATCATTCATAAAGAAACTCGATTCCAACAT
TCACGAACTCGAGAAAGACACTTCAACAAAAGATCTAGATTTAAAAGCGA
TGGAAAACCTCGATAAAACCGACGAATCAACGAATCAACGAAATACGCGA
CATAATACTGAGAAAGATCAGAACACTCAAGGCATGAGCACTAAAAAGAC
ACGCGTTAATAAAGCAGATCGTGTTGTACCGAGCACGGTTCACGCTATCT
TAAATGCACCAACGAACACAATGAGAGCTTACTTACGTTCGAAGACTGGA
CTCTATTTAAGGATGGGACCCAATGGTGAATTGGGTGGCACAAGAAAAAT
GAAAGATAAGCATGTTATATTCGTCATTGAGAGGATGTCAAAAGACGCGG
TCCGTCTGAAAGGTGAAGCCGCCAATAAATACATCTGTATCAATAAGAGG
AGAAAGCTATTCACAAGGTTATATTCGTCATTGAGAGGATGTCAAAAGAC
GCGGTCCGTCTGAAAGGTGAAGCCGCCAATAAATACATCTGTATCAATAA
GAGGAGAAAGCTATTCACAAGGGAGAAACCAAATTCCAAATGTCTGCTAA
GGAGCTACTTAGAGGAAAATCATTACGAACTATTTTGGTCTTACATGTAT
TCTAAAAAGACTGATGGCGAGAACGGTTGGTTCTTAGCTTTAAAAAGGAA
CGGTAAAATCAGGAAACCAGCTAATACAAAAATCGGAGACCGACAGACTA
TGTTTTTCGTGCATCGAGCAGATGATATTCCAAGCGGATCTTGAGAGAAA
CCAAATTCCAAATGTCTGCTAAGGAGCTACTTAGAGGAAAATCATTACGA
ACTATTTTGGTCTTACATGTATTCTAAAAAGACTGATGGCGAGAACGGTT
GGTTCTTAGCTTTAAAAAGGAACGGTAAAATCAGGAAACCAGCTAATACA
AAAATCGGAGACCGACAGACTATGTTTTTCGTGCATCGAGCAGATGATAT
TCCAAGCGGATCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000290_pilon | genome | sc0000290_pilon:254411..261407 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 637-858:223 |
| Aaloc | 535-636:785 |
| Aaloc | 31-531:4817 |
| Aaloc | 1-30:6998 |
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