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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000290_pilon:219615..223929- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040077 ID=XLOC_040077|Name=XLOC_040077|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4315bp|location=Sequence derived from alignment at sc0000290_pilon:219615..223929- (Clytia hemisphaerica_ch_hm2_pilon)
AAATTTCTTGAAGTTCTAAAACCATTCATATCGGTTTTACCCGAAGTTTC
AAAGCCAGAAAGAAAGGTTTGTTAATTTTTATCATTATGTTTATATTAGG
GGTCAGTCACAAATCGATTCTAGGTTAGAAGAACGTCAATTGACGTTTTA
AAAGCTGACCCACCCACCCACACCCAAAAACGTCAAACACCTTGATATCC
CCGAAAATCGATAAAAACTGCCTTCATTGCTGTTTCGTCAGCCATCTTGA
TTTTCACTACGGCTCGCATAGTTTATATTTGAAAAAAAAAGAAACGGAGA
TAATTTCTAAACTTGTTCACAAAATTTCCGTAATTAATTATCTCCATAGT
ATGTAGCGACAGAAAGAACGGCCATCTGCAAAAATTCAAGGGCCGCTCGG
GCCGTCAAACAAAGAAAAGACATAAACATCGGGCCGTTTGTTTTGGTTTT
CAAAACAAACGAAGCGATCATACAGAAACATGGCGAGAAGTAAATATTTG
GCATGGAATGAAAAATCGATGTTTCTGAAAAACGTCAACAACCTTTAACC
CACCCACCCATATACGTCAATTGACGTTCTTCTAACTTAAAATCGATTTG
TGACTGACCCCTTACCTTTCCCTTATAAAAATCCAGTCAGTAGAAAGGGT
AATATGCATGCCGGATAATTTTTGGCGTAGCCTTGAATGAGGTCTTTTAG
ATTGATGGCCAGAAAAGATGCACTAACTGTTGTGTATAAATTTGTAGGGA
AGGTAAACAAACGTATGTCTTTGTCTGTGAGTGAGGGATTAGGTGTATAT
TAATAATATGTTCCGTTTGCGTCATAAAACATTCACGTCAGTGAATTTCA
AGTTGATAATTTCAATGAGGGTGGACGGAAAAAAACTCAAATGGGACTCA
ATGTGGGTAAAGTAAACAAAAACTTTGAATGAAGTGAATGGTGATGTAGA
AAAGGCGCAAGGGTTTAGCTATTGAAAAAATTTTCTGACATTATTGTGAC
TGGGTGGACTCTGGATTTATGTTTTGAAGGTGAGTTGGGCGACGCGAACA
GAACATTTTATTGATGGTCGCCTTAGGGAAAGTTAGGTTTTAGCTGATAA
AGCTCGATGTTGCAGATAAATAGACTGAGGTTGTTTTCAAAGAAGTCTAC
TTTTTGTTGGTAACTTGTATGTGGACAATTTCATTTATATACAATTGCTT
TTCAGAATAGGATGTAAGCAAGTTTTAATCTCCAAATTACCTGGAAATGA
AAAGCTGGTTATCTCTTTTAGTTCTAAAGGAACAAAATTTTCTTGAAAGC
AACTTTTTAACAAATACTGTAAGTTGGTCTAATGTCGACATCCCTCTCCT
TAATTTGTCACCTTTTTTAGCGATAGGAATAATAGGAAGGTCGGAATCAC
TGATTGAAACTAATTTTCTTTGCTTAGCAATCAGTCAACCTTCCTATTAC
TCCAATCTCTAACAAGGGATGACGAAATTAAAAGAGGGATGTTGACATTA
AACCAACTTACGGTAATTTTGCTGGATAATTTAGGTTAACATCAAATTTT
GCAAGTTTTTACCATTCTATCAAATTTACCCAAATTGTACCTAAGAAAGC
TCACATTACCTTATTTCCTGTGAATTTTGTGTTCCTTTTCTTATTTTGCA
CCCTCAATACACCCTTCACAATTTTGTGATTTTTGCTCCCTTGCACCATT
TGAGGGTCAAGCATAAATGTTTTTTATTGGAAATTTGGTTGCATGATTTT
AAAGCTCTAAAACCATTACGTTTTTCTTTTGCTTTAACAGATTCAATTCA
GAGAGAAGGTATTATGGACAGCCATCACTCTCTTTATTTTCTTGGTTTGT
TGCCAGGTATATTTTTAGCTTATTTAATTTTTATTTAAACTGTTTTGTCA
TCCAACTTAAAAACATTGAATTTTAGTCCAACTGAAGGTTACGTTGCACT
AGAAATTCACTTCCTTGTGGGATAATTGCTAATTGATGATGTGTTATACA
TTTTAATTATACATAATTAATTATTCAACCAATTTGATAACTGTGTTCTT
AATGAGCCAATGGTTATTCGGGGCAATGAATTAATGAAAGTTTATTTCTT
CTAGATTCCCTTGTTTGGAATTATGTCTTCAGATTCTGCTGATCCTTTCT
ACTGGCTCCGTGTTATTATGGCATCCAATAGAGGAACTTTGATGGAACTT
GGTATTTCACCAATTGTTACATCCGGCTTGATCATGCAACTTTTGGCTGG
TGCCAAAATTCTTGAAGTTGGTGACACTCCACGTGACCGTGCTTTATTCA
ATGGTGCCCAAAAATTGTTTGGAATGATCATTACAATCGGTCAAGCTATT
GTTTACGTTATGACTGGAATGTATGGTGAACCATCTGATCTTGGAGCTGG
TGTTTGTCTTTTGATTATCATTCAATTATTCTGTGCTGGTCTCATTGTCT
TGCTTCTTGATGAATTATTGCAAAAAGGATATGGTTTAGGATCTGGTATT
TCTCTCTTCATTGCTACCAACATTTGTGAAACAATTGTCTGGAAAGCATT
CAGTCCTGCCACTGTCAACACCGGAAGAGGTAATTTTGATATTTGAAACT
CGCACTATTTGTCTTTTAACTTTTGAGAAATTGATTGGTATAAAGGCTAG
CATCACCATCTGTTTTAATTGGTTCAACCCTAATTCTCAAAAGCTAAGTC
AGCATCTGCTAGAGACCTCAAGGGGACTTTTTAGCTTATTCTTCACAAAA
TTTACTACTATGTTAAGATGTACTATCAGTCAATAATAGAGACAAGTTTA
TTTTCCGATACTCAGAGTTTTGTGCCGTTTCAGGCAGTCTTCAGTCAGAT
TTTATTGACTGATATATCGCTCTACCGATGGTATAGAGCACTTTGTTGAA
TCGCAAGTCAGATTTGCAAATTAAAATGTACTACATGTTTTTGTCTTTGT
AGGTACTGAATTTGAAGGAGCTGTCATTGCTTTGTTCCATCTTCTTGCAA
CCAGAACTGACAAAGTCAGAGGTCTTCGTGAAGCTTTCTACAGACAAAAC
CTTCCAAACTTGATGAACTTACTTGCCACAATCTTTGTCTTTGCTATTGT
TATATACTTCCAGGTAAGGAAATCAAACATTCAGAAAGAAATGTAGTAGA
TAATTGTAAATATAAAATTACACTTCTAGTAAACCAAGAAGCTGGTGGAG
ATTTCGCTGATATCTTTGTTCTTTACTGAACTTGGTTTTGTAAATCTTTA
GGTTTGAAGATTTTTCACGTCAATTTACCTTAACTTTTTAGGGATTCCGT
GTAGATTTACCAATCAAATCAGCAAGATACAGAGGACAATACAGTTCATA
TCCAATTAAACTGTTTTACACATCAAACATTCCAATCATTTTACAGGTAA
GACAGTCTTAAGTGCTTAAAATTGTCTATTATAGCCTACATGTAGTAATA
TCGTTGTTTTTTTATTTCAAATTCTGATGTCACATGTCTTTTAACCAATG
AAAATTATCTTAGAAAAAATTTACTTTATTTTTGACTTTTATTTTATTTT
TTGTGACATTCATCTGTAATTTTTTTCTTTTCATTTAAAGAGTGCATTGG
TATCAAACGTATACATCATCTCACAAATGTTATCATCCAAATTTGCTGGT
AACTTCTTTGTAAGCCTTCTTGGTGTATGGAATGAGGCTGGTGGCGCGTC
CAGATCATACCCAATTGGTGGATTATGTTACTACTTGTCTCCACCAGAAT
CATTGGGAAATATCGTGGAAGATCCAATCCACGCTTTCATGTACATCTTT
TTCATGCTTGGATCATGTGCTTTCTTCTCCAAGACATGGATTGATGTCTC
TGGCTCATCTGCCAAAGATGTTGCCAAGCAATTGAAAGACCAACAAATGG
TCATGAGAGGTCACCGTGAAAAATCTATGATTCACGAGTTGAACAGGTTA
GCTTTTTACATTTAAAAACAGGCAATAGCATGATATTAAATGAAGCTCTT
TAGATAACTACATTTCTATGCAAGTTCCTCTAATGCTCTCCTTTATAAAA
TCGAAGTTTCAAAAAGTCCTTATATCTCACCAATTTCTTTCCTCTCAACA
CTATTTACAATTTTTTTTTTTTTTTTAGATACATTCCAACAGCTGCTGCT
TTTGGTGGTCTTTGCATTGGAGCTTTATCTGTTTTGGCCGACTTTATGGG
AGCCATTGGATCTGGTACTGGTATCCTTCTTGCCGTCACAATTATTTATC
AATACTTTGAAATCTTCGTCAAAGAACAGAGCGAACAAGGTGGTATGGGT
ACATTGCTTTTCTAA Coding sequence (CDS) from alignment at sc0000290_pilon:219615..223929- >XLOC_040077 ID=XLOC_040077|Name=XLOC_040077|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2832bp|location=Sequence derived from alignment at sc0000290_pilon:219615..223929- (Clytia hemisphaerica_ch_hm2_pilon)
AAATTTCTTGAAGTTCTAAAACCATTCATATCGGTTTTACCCGAAGTTTC
AAAGCCAGAAAGAAAGAAATTTCTTGAAGTTCTAAAACCATTCATATCGG
TTTTACCCGAAGTTTCAAAGCCAGAAAGAAAGATTCAATTCAGAGAGAAG
GTATTATGGACAGCCATCACTCTCTTTATTTTCTTGGTTTGTTGCCAGAT
TCAATTCAGAGAGAAGGTATTATGGACAGCCATCACTCTCTTTATTTTCT
TGGTTTGTTGCCAGATTCCCTTGTTTGGAATTATGTCTTCAGATTCTGCT
GATCCTTTCTACTGGCTCCGTGTTATTATGGCATCCAATAGAGGAACTTT
GATGGAACTTGGTATTTCACCAATTGTTACATCCGGCTTGATCATGCAAC
TTTTGGCTGGTGCCAAAATTCTTGAAGTTGGTGACACTCCACGTGACCGT
GCTTTATTCAATGGTGCCCAAAAATTGTTTGGAATGATCATTACAATCGG
TCAAGCTATTGTTTACGTTATGACTGGAATGTATGGTGAACCATCTGATC
TTGGAGCTGGTGTTTGTCTTTTGATTATCATTCAATTATTCTGTGCTGGT
CTCATTGTCTTGCTTCTTGATGAATTATTGCAAAAAGGATATGGTTTAGG
ATCTGGTATTTCTCTCTTCATTGCTACCAACATTTGTGAAACAATTGTCT
GGAAAGCATTCAGTCCTGCCACTGTCAACACCGGAAGAGATTCCCTTGTT
TGGAATTATGTCTTCAGATTCTGCTGATCCTTTCTACTGGCTCCGTGTTA
TTATGGCATCCAATAGAGGAACTTTGATGGAACTTGGTATTTCACCAATT
GTTACATCCGGCTTGATCATGCAACTTTTGGCTGGTGCCAAAATTCTTGA
AGTTGGTGACACTCCACGTGACCGTGCTTTATTCAATGGTGCCCAAAAAT
TGTTTGGAATGATCATTACAATCGGTCAAGCTATTGTTTACGTTATGACT
GGAATGTATGGTGAACCATCTGATCTTGGAGCTGGTGTTTGTCTTTTGAT
TATCATTCAATTATTCTGTGCTGGTCTCATTGTCTTGCTTCTTGATGAAT
TATTGCAAAAAGGATATGGTTTAGGATCTGGTATTTCTCTCTTCATTGCT
ACCAACATTTGTGAAACAATTGTCTGGAAAGCATTCAGTCCTGCCACTGT
CAACACCGGAAGAGGTACTGAATTTGAAGGAGCTGTCATTGCTTTGTTCC
ATCTTCTTGCAACCAGAACTGACAAAGTCAGAGGTCTTCGTGAAGCTTTC
TACAGACAAAACCTTCCAAACTTGATGAACTTACTTGCCACAATCTTTGT
CTTTGCTATTGTTATATACTTCCAGGTACTGAATTTGAAGGAGCTGTCAT
TGCTTTGTTCCATCTTCTTGCAACCAGAACTGACAAAGTCAGAGGTCTTC
GTGAAGCTTTCTACAGACAAAACCTTCCAAACTTGATGAACTTACTTGCC
ACAATCTTTGTCTTTGCTATTGTTATATACTTCCAGGGATTCCGTGTAGA
TTTACCAATCAAATCAGCAAGATACAGAGGACAATACAGTTCATATCCAA
TTAAACTGTTTTACACATCAAACATTCCAATCATTTTACAGGGATTCCGT
GTAGATTTACCAATCAAATCAGCAAGATACAGAGGACAATACAGTTCATA
TCCAATTAAACTGTTTTACACATCAAACATTCCAATCATTTTACAGAGTG
CATTGGTATCAAACGTATACATCATCTCACAAATGTTATCATCCAAATTT
GCTGGTAACTTCTTTGTAAGCCTTCTTGGTGTATGGAATGAGGCTGGTGG
CGCGTCCAGATCATACCCAATTGGTGGATTATGTTACTACTTGTCTCCAC
CAGAATCATTGGGAAATATCGTGGAAGATCCAATCCACGCTTTCATGTAC
ATCTTTTTCATGCTTGGATCATGTGCTTTCTTCTCCAAGACATGGATTGA
TGTCTCTGGCTCATCTGCCAAAGATGTTGCCAAGCAATTGAAAGACCAAC
AAATGGTCATGAGAGGTCACCGTGAAAAATCTATGATTCACGAGTTGAAC
AGAGTGCATTGGTATCAAACGTATACATCATCTCACAAATGTTATCATCC
AAATTTGCTGGTAACTTCTTTGTAAGCCTTCTTGGTGTATGGAATGAGGC
TGGTGGCGCGTCCAGATCATACCCAATTGGTGGATTATGTTACTACTTGT
CTCCACCAGAATCATTGGGAAATATCGTGGAAGATCCAATCCACGCTTTC
ATGTACATCTTTTTCATGCTTGGATCATGTGCTTTCTTCTCCAAGACATG
GATTGATGTCTCTGGCTCATCTGCCAAAGATGTTGCCAAGCAATTGAAAG
ACCAACAAATGGTCATGAGAGGTCACCGTGAAAAATCTATGATTCACGAG
TTGAACAGATACATTCCAACAGCTGCTGCTTTTGGTGGTCTTTGCATTGG
AGCTTTATCTGTTTTGGCCGACTTTATGGGAGCCATTGGATCTGGTACTG
GTATCCTTCTTGCCGTCACAATTATTTATCAATACTTTGAAATCTTCGTC
AAAGAACAGAGCGAACAAGGTGGTATGGGTACATTGCTTTTCTAAATACA
TTCCAACAGCTGCTGCTTTTGGTGGTCTTTGCATTGGAGCTTTATCTGTT
TTGGCCGACTTTATGGGAGCCATTGGATCTGGTACTGGTATCCTTCTTGC
CGTCACAATTATTTATCAATACTTTGAAATCTTCGTCAAAGAACAGAGCG
AACAAGGTGGTATGGGTACATTGCTTTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000290_pilon | genome | sc0000290_pilon:219615..223929 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1240-1425:187 |
| Aaloc | 883-1236:726 |
| Aaloc | 778-882:1025 |
| Aaloc | 619-777:1362 |
| Aaloc | 142-615:2212 |
| Aaloc | 76-141:2526 |
| Aaloc | 10-75:4316 |
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