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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000290_pilon:168368..170779- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040076 ID=XLOC_040076|Name=XLOC_040076|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2412bp|location=Sequence derived from alignment at sc0000290_pilon:168368..170779- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGGAGAATGAGTTGAACGGCTACCAAAAGCATTTCTACAAATCGAA
TGGATGTAAGAAGGCATTGATTCAACAAATCTCCAAGGTGAAAAAAGGCT
CCAAAGTGAAATGCAGTACGGAATCACTATCTGACCCTGCAAAAGTTATT
AACTTCATTAACGGTCATCAGATTAGAGACTTGCATCGTATAGCTAAGAA
TAACAAAACAAGGAAAGCTGATGATGTCAAAGCTTCCAATATTATAGTTC
CATCAAATGAGAAGATCATGAGGAAATTGACTAAGGGAAAAGAACAGATA
TCATGCAAATGTCCTAACGGGTTCAAAAGGGGTAATAAAACAGCTCAAAT
CAATGGAGGATGTTTAAATCAGTCTTGCAAGAAACAAACTCATTTGTCAC
CAATAAAAAATGAACGCTCCAAACCAAGAGTAGAGAAGAATAATCATCGA
AAAAAGAACATAAATGATCCTGAAGATGATAAGCCGAAAGAATATGTCCT
TAGATCTTCTCAGCGCCTTCAGTATATCCACAACATGAAGAAAAGGGACA
TTGAAATCGACAAACCATTAGTGGATAGGATGACAAATATGTTCAATGAA
CCAATAGATATTAGATTAGATACAAAAAAGCTGAATATTCCTGTGTTAAA
CAACAATCCTCAATCTAGAGTAAATTGTGAATGGGGCGATTGTAGGCTTT
CATTTATTAATGCAGAAGACCTTACAGACCATGTTGAATCATCTCACTTG
GTTAGTTGTGAGGAAAGTGACAACTGTAGCTGCATGTGGAGAGATTGCAA
GTTTTTGAATCAATCGTGTTCTTTTAAATGGCTATCAAAGCATGTTTTAC
GACATTGCGATTTGAAGCCATTTAAATGTGTTATTCTTGGTTGCGATATG
ACATTTAGTACACAGAATGGACTAGCAAGACATGTCCCAACACATTTTAA
TGAAAGTCGCGTTAGACGTGCTTGTGTCTTAACACATGAAGCAGCTAGGA
AGGAAGAATTAAATAAAACTAAAAGACAATTAAGTGCAACTTTGAGTACT
TGTTCAGAATCAAGTAGTGGTACATTTTGTAGTAGTGGTAGCAGCAGTCT
GGGTGAAGAGATCATTTTTGACAACGCCTCAATACCAAACGTATCAGTTG
GCAAACATACAGATTTTCGTGAAAGTAAGTCCGAAGCATTTCTCATAAAG
ATGGAATTTCGCTTTATTATTGTTTGTTCTCGTTTTACAAAATAAATCGC
AATAGGCAATCAAAATAATGTCTCCTGGAACAGTTCCATCTGTTTCTTAT
TTAATTACTGTTTGTTTTTTGCGATATTACTCAACTCTGCCTGAGAGATT
GTTGACGTCATAAAATTCACTTTTTGCATATTTTCATGTTCTCAGATCAT
CATACGTTCACGACCAAGACATACAATTATGTGAAAAAGAAGATTCAAAA
ATCCACCTTTGATCCCTCTACCAATTCTGGATATTTAGATAAAGCTTTTC
GTATTGACCACAAGGTAAGTGTATTTAGAATATTCCTTATGAGATTTGGT
AGCGTAGAGAGGTAATTAAAACTTTTTTGTATTGCCAGAATTAATTGTTA
ATTGTTACAGTTAAGGGAGGTAAAATGTATGTGTTTTTTTTGTTCATTAT
GATAAGAATTAACTTGAGAGATATTTTCGATGCTCTATTATGCTTCTAAT
TCTAAGTGAATACTTTCTATGTTTTCCTGAAAAACCAGGAGATTGAAATT
GTATTATTTTTGTTACCTTGGCTCCATTTTTTTCCTTAGGTGATAGGAAG
GAGGTCCGGTAGTAATGGTACAACCGAAATGTTATTGACCCCTTCACTCA
ATAATTTGTGAGTTAGACTTTAATGGTATTATTGCGCATATTGTTTTTGC
ATTCATTTCCAATGTGTTGTTTCTTTCACACCTCTTCACTTTTCACACTG
TCCATCATCACTTAAATGACAGTTTTCAAACAATCTATTGTTTGTAAGTC
GTGAATCAGTCTTTCACCTTGTAACTAACTATAGGGATTTTATGTCTTCA
ATTGAGCTCAATTTATTTTTCATTAAATACCTCTGAATACCTAATACAGT
TATGTTTCCAAAAAGTATTGTAGTGGAAAGTGTAGTAATAAGTAGTTCGT
TTGTCCAAATAGAAATTTTGACTCCCTTAGCTGGAAAGAAACGTACGAGC
TTTTCTAAACCTGAACACCCTCTTTAACCAGTAAAATCATCTTTATTTTT
AGATTCCCTCGTTCTTCATTCTGGTGTGACAGCAATGAATTTCGAAAACG
TAAACATTCTCACGTTGAAATCCCGATGAGGGACATGCCGGTCGATATCA
AAAATAAATTATACGATTCCGAACATGCTTCAAGCATTCGACGTCGCAAG
AAACGAAAGTGA Coding sequence (CDS) from alignment at sc0000290_pilon:168368..170779- >XLOC_040076 ID=XLOC_040076|Name=XLOC_040076|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3042bp|location=Sequence derived from alignment at sc0000290_pilon:168368..170779- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGGAGAATGAGTTGAACGGCTACCAAAAGCATTTCTACAAATCGAA
TGGATGTAAGAAGGCATTGATTCAACAAATCTCCAAGGTGAAAAAAGGCT
CCAAAGTGAAATGCAGTACGGAATCACTATCTGACCCTGCAAAAGTTATT
AACTTCATTAACGGTCATCAGATTAGAGACTTGCATCGTATAGCTAAGAA
TAACAAAACAAGGAAAGCTGATGATGTCAAAGCTTCCAATATTATAGTTC
CATCAAATGAGAAGATCATGAGGAAATTGACTAAGGGAAAAGAACAGATA
TCATGCAAATGTCCTAACGGGTTCAAAAGGGGTAATAAAACAGCTCAAAT
CAATGGAGGATGTTTAAATCAGTCTTGCAAGAAACAAACTCATTTGTCAC
CAATAAAAAATGAACGCTCCAAACCAAGAGTAGAGAAGAATAATCATCGA
AAAAAGAACATAAATGATCCTGAAGATGATAAGCCGAAAGAATATGTCCT
TAGATCTTCTCAGCGCCTTCAGTATATCCACAACATGAAGAAAAGGGACA
TTGAAATCGACAAACCATTAGTGGATAGGATGACAAATATGTTCAATGAA
CCAATAGATATTAGATTAGATACAAAAAAGCTGAATATTCCTGTGTTAAA
CAACAATCCTCAATCTAGAGTAAATTGTGAATGGGGCGATTGTAGGCTTT
CATTTATTAATGCAGAAGACCTTACAGACCATGTTGAATCATCTCACTTG
GTTAGTTGTGAGGAAAGTGACAACTGTAGCTGCATGTGGAGAGATTGCAA
GTTTTTGAATCAATCGTGTTCTTTTAAATGGCTATCAAAGCATGTTTTAC
GACATTGCGATTTGAAGCCATTTAAATGTGTTATTCTTGGTTGCGATATG
ACATTTAGTACACAGAATGGACTAGCAAGACATGTCCCAACACATTTTAA
TGAAAGTCGCGTTAGACGTGCTTGTGTCTTAACACATGAAGCAGCTAGGA
AGGAAGAATTAAATAAAACTAAAAGACAATTAAGTGCAACTTTGAGTACT
TGTTCAGAATCAAGTAGTGGTACATTTTGTAGTAGTGGTAGCAGCAGTCT
GGGTGAAGAGATCATTTTTGACAACGCCTCAATACCAAACGTATCAGTTG
GCAAACATACAGATTTTCGTGAAAATGTTGGAGAATGAGTTGAACGGCTA
CCAAAAGCATTTCTACAAATCGAATGGATGTAAGAAGGCATTGATTCAAC
AAATCTCCAAGGTGAAAAAAGGCTCCAAAGTGAAATGCAGTACGGAATCA
CTATCTGACCCTGCAAAAGTTATTAACTTCATTAACGGTCATCAGATTAG
AGACTTGCATCGTATAGCTAAGAATAACAAAACAAGGAAAGCTGATGATG
TCAAAGCTTCCAATATTATAGTTCCATCAAATGAGAAGATCATGAGGAAA
TTGACTAAGGGAAAAGAACAGATATCATGCAAATGTCCTAACGGGTTCAA
AAGGGGTAATAAAACAGCTCAAATCAATGGAGGATGTTTAAATCAGTCTT
GCAAGAAACAAACTCATTTGTCACCAATAAAAAATGAACGCTCCAAACCA
AGAGTAGAGAAGAATAATCATCGAAAAAAGAACATAAATGATCCTGAAGA
TGATAAGCCGAAAGAATATGTCCTTAGATCTTCTCAGCGCCTTCAGTATA
TCCACAACATGAAGAAAAGGGACATTGAAATCGACAAACCATTAGTGGAT
AGGATGACAAATATGTTCAATGAACCAATAGATATTAGATTAGATACAAA
AAAGCTGAATATTCCTGTGTTAAACAACAATCCTCAATCTAGAGTAAATT
GTGAATGGGGCGATTGTAGGCTTTCATTTATTAATGCAGAAGACCTTACA
GACCATGTTGAATCATCTCACTTGGTTAGTTGTGAGGAAAGTGACAACTG
TAGCTGCATGTGGAGAGATTGCAAGTTTTTGAATCAATCGTGTTCTTTTA
AATGGCTATCAAAGCATGTTTTACGACATTGCGATTTGAAGCCATTTAAA
TGTGTTATTCTTGGTTGCGATATGACATTTAGTACACAGAATGGACTAGC
AAGACATGTCCCAACACATTTTAATGAAAGTCGCGTTAGACGTGCTTGTG
TCTTAACACATGAAGCAGCTAGGAAGGAAGAATTAAATAAAACTAAAAGA
CAATTAAGTGCAACTTTGAGTACTTGTTCAGAATCAAGTAGTGGTACATT
TTGTAGTAGTGGTAGCAGCAGTCTGGGTGAAGAGATCATTTTTGACAACG
CCTCAATACCAAACGTATCAGTTGGCAAACATACAGATTTTCGTGAAAAT
CATCATACGTTCACGACCAAGACATACAATTATGTGAAAAAGAAGATTCA
AAAATCCACCTTTGATCCCTCTACCAATTCTGGATATTTAGATAAAGCTT
TTCGTATTGACCACAAGATCATCATACGTTCACGACCAAGACATACAATT
ATGTGAAAAAGAAGATTCAAAAATCCACCTTTGATCCCTCTACCAATTCT
GGATATTTAGATAAAGCTTTTCGTATTGACCACAAGGTGATAGGAAGGAG
GTCCGGTAGTAATGGTACAACCGAAATGTTATTGACCCCTTCACTCAATA
ATTTGTGATAGGAAGGAGGTCCGGTAGTAATGGTACAACCGAAATGTTAT
TGACCCCTTCACTCAATAATTTATTCCCTCGTTCTTCATTCTGGTGTGAC
AGCAATGAATTTCGAAAACGTAAACATTCTCACGTTGAAATCCCGATGAG
GGACATGCCGGTCGATATCAAAAATAAATTATACGATTCCGAACATGCTT
CAAGCATTCGACGTCGCAAGAAACGAAAGTGAATTCCCTCGTTCTTCATT
CTGGTGTGACAGCAATGAATTTCGAAAACGTAAACATTCTCACGTTGAAA
TCCCGATGAGGGACATGCCGGTCGATATCAAAAATAAATTATACGATTCC
GAACATGCTTCAAGCATTCGACGTCGCAAGAAACGAAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000290_pilon | genome | sc0000290_pilon:168368..170779 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1363-1521:160 |
| Aaloc | 1294-1359:624 |
| Aaloc | 1177-1293:1016 |
| Aaloc | 1-1173:2413 |
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