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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000101_pilon:1097103..1100042- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040075 ID=XLOC_040075|Name=XLOC_040075|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2940bp|location=Sequence derived from alignment at sc0000101_pilon:1097103..1100042- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTCAATGATGAAGATGTCAAGAAACAAGTAAGCTCTTGGGTCAC
TGAATTCTTCTTTTTGTGACAGGAAAAAAATTGAATACAATTTTTATAAT
AGATGATGCTCTAGAACTGTTTGAATACACAATGCTAAAATTTTGATAAT
ATAGTTCTGTTTTGTATGTAAAATCTTTTTAAAATGAACTTATCAAAGTA
GACTAAATTAACTGTAATATTTTTGCGAATTAGAAATCAGCACTGAAATT
CTGATTTCTTCACATGTAATACCATGATTAGGTATGATAAGCATATGCCT
CTTATTTCGTCTGTTTCTCTAATTACCAAGATATAATTTTTACCTTTTCA
GATTGAACACATGATGGCTTTCATCCATCAAGAAGCCAAAGAAAAAGCAG
AAGAAATTGAAGCTAAGGTAATGAAACAAACTATAATCTTCTTCCGTCAT
TCCAATGAAAATCTTTGAGCAAAGATAATGATATACAGCTTTAAAATAGT
CTTAAAATCTTCAATGTCCTAATTTTAATATAATTTTAATTATTAGAAGC
TTCGCTTTGGTGTTATCGCAGCAATAAGGTCAACCAATACATTTTTCCTG
AAGTTGCTGTTTTTTTATGCTTTAGGCTGAGGAAGAGTTCAATATCGAAA
AAGCCAGACTAGTTCAACAAGAGCGTATCAAAGTCATGGGTTATTATGAG
AAAAAAGAGAAACAAATTGATCTGCAAAGAAAAATGTAAGAAATGGAGTC
AAAATACTTTTATTAATTATATCCTAGTACGCCTGCTGTTTTGGAGTAAA
TAAAAGTCGGTTCTATACCATGTACAATCTCACGCAATAAATCTGTGATT
GCTTCTAGAAGGGGTTCTCCTTTTGTCAACCTCATGAACACTTCGCTTGG
CATTTGCCACCAACCAGGGTTTCTAGAAACTTTATTTTTTTTACTTTCTG
TTTACAGCCAAAGATCCAACTTCTTGAATCAATCTCGATTGCAATCTTTG
AAAACTCAGGATGACCACATTCAGGTAACCTTTTTACTTTCAATACACTA
GGTAGAAAATCATCAAAAATTGTCATCATTATTTTAATATAACGAATGAT
ATTAAGTATTTTGCCTAAGATTACTAGCTTGGGAGACTTGCTCGGCCACC
ATTTTTGTACCAATGTAACCTTTTTCTCCAATAGAAAATTTTGGACGAAA
CTAGATCTCGTCTTGGTGAAGTTACCAAAGACAAGAACCAATACAAGAAC
ATCTTGAATGGACTTCTCACTCAGGTATGTTATTTATATTGTTAATATAA
TGTTGGTATATACCCTCTAAAGTCAAATCTAGCTTTAGATTGACCGGTAT
CAAAGACACATATTGAGCAGAGGTTTAGACGTTCCTCTTTGCGCCCTAAA
CTTTCTAATTTTGATTTAAAGTGGTCAGAAAACTGGCGGTCTAAAGTCAA
AAAGATTAAAGGAGTAACTGCTTCTTTCAATCTTTTCTGAGTAAAGATTT
TAGCTACCAACTTCCTTCCCACTTTTTGCCTACTCTTACATAACAATTAG
CCATCTAAACTATTCACCTTAGTACCTCCCCTGCAGTATGATTTTTGAAA
AAACGACCTTTTAGTGCCCCCTTTTATATAGAAAAAAATGCAAATATCAG
ATCAGTCGATTATGTGCCTGGGTAAAAGAACATTCTGGTTATGTTTTCAT
GAAAGTACTTAACATGTTTTATTTTCATTTTCTAGTGTCTTTATCAACTG
CTTGAACCAACTGCACAAATTAGATGCAGACGTGACGATTTGGAATTAGT
CAAGGTCAGTATGAAATGAATAATTGTATTTAATAATTCCTTTAAATACA
TCCCCTTCTCAAAGACCCGTTTAGGATTCTTTTAGCCAGTGGGGATAGAA
ATAAAGGGCTAAAGCTCAATGGGGATTGATATTCCCATCTTTTTTATGGC
TGGGGATTTCAATTCTTTTGTTTTCAAATTCAGTGGGGATGGGGAAAATG
AACATTTTGCAGTGAAGATTCGTTTATTTGGTCATTTTTAGTGGGGACGA
AAATTCGAGGATAATCTTCTACCGTGGACGATATTTGGTCAATTTTTCCA
GTGGGAAGAAAGGGGTCCCATCTTCTTAATGCAATTACGCTCTTACGTTT
GTGACTCCAGGAAATTAAAGACGAATGTTTGAAGAACTACCGTGAGAAAA
CAAAGAAGGAATGCGATTTGCAAATTGATAGCAACAATTATTTGCCAGAG
TCATGGTAAGTAATCGAAATATTCTTGTCCTGACCTTTTCCCTGCTAAAT
CATAATTCTGAAATGATTTATCAAATCTTCATGGAGTGCATTTTATAATT
CAAAACCATTAAAAGAATTAGTGAATTAGCTCTTTTATACTTCGTTGACA
TCAGCCATCTCTACAACCGAAATAATTTGCTTGTTTGAAAGATCTGGAGA
GGTCTGAAAGTGAAAGGTCTGAAGTTTTCGATTTTCATAATCCTATCATA
ACAATTGAATTGAAGATTGACTCTAATATTTCGAATATTTTTCGCTTTCT
TTCCCAGCTCTGGCGGACTTGAATTGCTTGCCAAAGGTGGTCGCATCCGT
GTGACAAACACATTGGAAAGTAGATTGGATTTGATGAGCAGACAAGTAAA
TACATTCTTTTACCAAGATCTGATAAATTGCACTTAAGGACATATTATAA
AAGTCCGATCCAAAGTTTTGATCTTACCAAGTACCAACTGGGTCACGGAA
AAGTATAAGAGTTTTGTAGCTAACTGCGTTGGAAATATTACTGTGAAATT
CTCCCACAGGTTTACTTTTTTCATTTGACAACTATTACTAGCAAGCCTAA
AATATGAATTATTTTCTTCAATTCCAGATGCTGCCAGAAATCCGGGAAAC
GTTATTTGGAGCAAATCCAGTCCGAAAGCACTTCGAATAA Coding sequence (CDS) from alignment at sc0000101_pilon:1097103..1100042- >XLOC_040075 ID=XLOC_040075|Name=XLOC_040075|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1362bp|location=Sequence derived from alignment at sc0000101_pilon:1097103..1100042- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCTCAATGATGAAGATGTCAAGAAACAAATGGTTCTCAATGATGA
AGATGTCAAGAAACAAATTGAACACATGATGGCTTTCATCCATCAAGAAG
CCAAAGAAAAAGCAGAAGAAATTGAAGCTAAGATTGAACACATGATGGCT
TTCATCCATCAAGAAGCCAAAGAAAAAGCAGAAGAAATTGAAGCTAAGGC
TGAGGAAGAGTTCAATATCGAAAAAGCCAGACTAGTTCAACAAGAGCGTA
TCAAAGTCATGGGTTATTATGAGAAAAAAGAGAAACAAATTGATCTGCAA
AGAAAAATGCTGAGGAAGAGTTCAATATCGAAAAAGCCAGACTAGTTCAA
CAAGAGCGTATCAAAGTCATGGGTTATTATGAGAAAAAAGAGAAACAAAT
TGATCTGCAAAGAAAAATCCAAAGATCCAACTTCTTGAATCAATCTCGAT
TGCAATCTTTGAAAACTCAGGATGACCACATTCAGCCAAAGATCCAACTT
CTTGAATCAATCTCGATTGCAATCTTTGAAAACTCAGGATGACCACATTC
AGAAAATTTTGGACGAAACTAGATCTCGTCTTGGTGAAGTTACCAAAGAC
AAGAACCAATACAAGAACATCTTGAATGGACTTCTCACTCAGAAAATTTT
GGACGAAACTAGATCTCGTCTTGGTGAAGTTACCAAAGACAAGAACCAAT
ACAAGAACATCTTGAATGGACTTCTCACTCAGTGTCTTTATCAACTGCTT
GAACCAACTGCACAAATTAGATGCAGACGTGACGATTTGGAATTAGTCAA
GTGTCTTTATCAACTGCTTGAACCAACTGCACAAATTAGATGCAGACGTG
ACGATTTGGAATTAGTCAAGGAAATTAAAGACGAATGTTTGAAGAACTAC
CGTGAGAAAACAAAGAAGGAATGCGATTTGCAAATTGATAGCAACAATTA
TTTGCCAGAGTCATGGAAATTAAAGACGAATGTTTGAAGAACTACCGTGA
GAAAACAAAGAAGGAATGCGATTTGCAAATTGATAGCAACAATTATTTGC
CAGAGTCATGCTCTGGCGGACTTGAATTGCTTGCCAAAGGTGGTCGCATC
CGTGTGACAAACACATTGGAAAGTAGATTGGATTTGATGAGCAGACAACT
CTGGCGGACTTGAATTGCTTGCCAAAGGTGGTCGCATCCGTGTGACAAAC
ACATTGGAAAGTAGATTGGATTTGATGAGCAGACAAATGCTGCCAGAAAT
CCGGGAAACGTTATTTGGAGCAAATCCAGTCCGAAAGCACTTCGAATAAA
TGCTGCCAGAAATCCGGGAAACGTTATTTGGAGCAAATCCAGTCCGAAAG
CACTTCGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000101_pilon | genome | sc0000101_pilon:1097103..1100042 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 619-681:64 |
| Aaloc | 532-618:383 |
| Aaloc | 436-528:781 |
| Aaloc | 367-435:1206 |
| Aaloc | 277-366:1757 |
| Aaloc | 211-276:1983 |
| Aaloc | 100-207:2316 |
| Aaloc | 34-99:2590 |
| Aaloc | 1-33:2941 |
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