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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000290_pilon:142703..144617- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040074 ID=XLOC_040074|Name=XLOC_040074|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1915bp|location=Sequence derived from alignment at sc0000290_pilon:142703..144617- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATTCTCTACATTTTTTCATATTCGCAGTAGTATTTTCGAACACGTG
CGGTAAGATTTCTTTTTAGTCTTTAATGTTCATTAGTTTAACTTTTTAAC
CGAGAACCATGACACATTTGTAAGAGTATAAACTATGACTATCATATTAG
ACCATAAAACCAGATCGATTATTTGTCATAATTTGTAACATCTCGTTCGA
TAAATTTTTCAGGTTTTCAGCCTCCTGAGTTTGAAAAATGTGATGTTGAA
GACGACAAACATTGGTTTTGTAAAAAAGGACTCCAATACTTTGACAATTT
TTGTGACCAAGATGAATCCAAAACTGCTTGCAAACAAACTTGTAATCTTT
GCAACGGACCTCCTACTCCTCCACCAGTTCCTGAACCAATATGTGGTGTT
TCCAAGGTTTCTCAAAGCCGTGTAGTCAACGGAGAGGACGCACCCGAAGG
AGCATACCCATGGATTGCTTCACTTCAAATCCGTGTAGCTATTGAAAATG
TCAAATCTCATTTTTGTGGTGGAACTCTTATCCATCCAAAATGGGTAAGG
ATGAATTATAATTTATGCAATGTCATGTTTTGCTCGTTTTAATCTTCCTT
CTAAAAATATTAGAGGAGGTAAATATAACAGAACGCAAAGCAAAGAAATT
TTATACGATGTTATCGTCGTAAAGAAGCTAAGGTTGTTAATATGATTGTA
AAGGGAAAACGTTGTGGGAACGTTGGATTATATGATATTGAATAAATTGA
ACTTTAAAAGTTTTGCCAGCGGTTATTACCCTCTTGTCCAAAACATCTAT
TTTCTACTGTACTATAAAAATAAATCACCAACCCATGATAATGAATTTTA
CTTCTTATTTTAGGTCTTAACAGCTGCTCATTGCTTTGACTTTGGTAATT
TCAGTATGAATGCTATCATGCCATTTGTTCACGTTGAGCTCGGTATCCAT
GACCAAGACAAAGAAGAATCAACCTCTCAGCTGAGAAACATCAAAAATGC
TTTTGAAAGTCCCGATTTAGGTGTCAAAGATGGCACTTTGTATGGAGATT
TACTTTTGTTGGAACTCGATGTACCAGTCATGTTGAATGATCGAGTCAAT
TTACCGTGTTTACCAGACAAAGAAGAATACCCAACGATTGGTCAGAACTG
TGTTGTGGCAGGTTAGGCAAACTTCATGTACTCTCAGGTGCCTAACTAAC
GTTGGGGTCGGAATAAACGGGGTGGGTGGAAGAATCTTCAAATTTTGATA
CATGGGGACCCAATTACCGAGGATTAGAAAGTGTACCACTTAATACCCCC
CCCCCCTAAAAAATGTAATTAAAAAAACTAAAACTTGGCTATTTGGAGCA
ACTGAAAATATTTTCAAAAATTTATTTTTTTTTTATTTATTTTTTCATAA
TTGCTTTGTTGTACAGTTGACTCTCGCTAATTTGAACTGGAAAATGATAT
CAAATCTGGTCGAATTATTTTATGAGGGTCTCGCGTTGTCAAGATTGACG
AGAATAAGTTTGAAAGAAAGCAAGATTCGAATAAAAGAAGTGATCATTAG
AGATCGCCTATTGTATGCGCTATTTATCATTTATAGGATGGGGAATAAGA
GAATATCCAAGTGAAAAGACAGGAGGTATTCTTCAACAAACTCGGTTACC
GGTTGTTGGGCCAAATCATATCGGTTGCCATAGTAACACTGAAGTCATTT
GCGTTGGTCATGGGTTTGGAACACAGGCTAATGGTAAACAGCATCCAAAC
GCGTGCAAAGGAGATTCTGGCGGTCCGCTCGTCTGCCAACAACCCAATGG
AAGCTGGAAATTCGTTGGGGTTGCTAGTTATGTTCACACTTATTGTAAAT
ACTACACAGCTTACGCTCCAGTCGGCAAATACTTGCCATGGATCAAAGAG
CATGTTCCTTTATAG Coding sequence (CDS) from alignment at sc0000290_pilon:142703..144617- >XLOC_040074 ID=XLOC_040074|Name=XLOC_040074|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2022bp|location=Sequence derived from alignment at sc0000290_pilon:142703..144617- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCATTCTCTACATTTTTTCATATTCGCAGTAGTATTTTCGAACACGTG
CGATGCATTCTCTACATTTTTTCATATTCGCAGTAGTATTTTCGAACACG
TGCGGTTTTCAGCCTCCTGAGTTTGAAAAATGTGATGTTGAAGACGACAA
ACATTGGTTTTGTAAAAAAGGACTCCAATACTTTGACAATTTTTGTGACC
AAGATGAATCCAAAACTGCTTGCAAACAAACTTGTAATCTTTGCAACGGA
CCTCCTACTCCTCCACCAGTTCCTGAACCAATATGTGGTGTTTCCAAGGT
TTCTCAAAGCCGTGTAGTCAACGGAGAGGACGCACCCGAAGGAGCATACC
CATGGATTGCTTCACTTCAAATCCGTGTAGCTATTGAAAATGTCAAATCT
CATTTTTGTGGTGGAACTCTTATCCATCCAAAATGGGTTTTCAGCCTCCT
GAGTTTGAAAAATGTGATGTTGAAGACGACAAACATTGGTTTTGTAAAAA
AGGACTCCAATACTTTGACAATTTTTGTGACCAAGATGAATCCAAAACTG
CTTGCAAACAAACTTGTAATCTTTGCAACGGACCTCCTACTCCTCCACCA
GTTCCTGAACCAATATGTGGTGTTTCCAAGGTTTCTCAAAGCCGTGTAGT
CAACGGAGAGGACGCACCCGAAGGAGCATACCCATGGATTGCTTCACTTC
AAATCCGTGTAGCTATTGAAAATGTCAAATCTCATTTTTGTGGTGGAACT
CTTATCCATCCAAAATGGGTCTTAACAGCTGCTCATTGCTTTGACTTTGG
TAATTTCAGTATGAATGCTATCATGCCATTTGTTCACGTTGAGCTCGGTA
TCCATGACCAAGACAAAGAAGAATCAACCTCTCAGCTGAGAAACATCAAA
AATGCTTTTGAAAGTCCCGATTTAGGTGTCAAAGATGGCACTTTGTATGG
AGATTTACTTTTGTTGGAACTCGATGTACCAGTCATGTTGAATGATCGAG
TCAATTTACCGTGTTTACCAGACAAAGAAGAATACCCAACGATTGGTCAG
AACTGTGTTGTGGCAGGTCTTAACAGCTGCTCATTGCTTTGACTTTGGTA
ATTTCAGTATGAATGCTATCATGCCATTTGTTCACGTTGAGCTCGGTATC
CATGACCAAGACAAAGAAGAATCAACCTCTCAGCTGAGAAACATCAAAAA
TGCTTTTGAAAGTCCCGATTTAGGTGTCAAAGATGGCACTTTGTATGGAG
ATTTACTTTTGTTGGAACTCGATGTACCAGTCATGTTGAATGATCGAGTC
AATTTACCGTGTTTACCAGACAAAGAAGAATACCCAACGATTGGTCAGAA
CTGTGTTGTGGCAGGATGGGGAATAAGAGAATATCCAAGTGAAAAGACAG
GAGGTATTCTTCAACAAACTCGGTTACCGGTTGTTGGGCCAAATCATATC
GGTTGCCATAGTAACACTGAAGTCATTTGCGTTGGTCATGGGTTTGGAAC
ACAGGCTAATGGTAAACAGCATCCAAACGCGTGCAAAGGAGATTCTGGCG
GTCCGCTCGTCTGCCAACAACCCAATGGAAGCTGGAAATTCGTTGGGGTT
GCTAGTTATGTTCACACTTATTGTAAATACTACACAGCTTACGCTCCAGT
CGGCAAATACTTGCCATGGATCAAAGAGCATGTTCCTTTATAGGATGGGG
AATAAGAGAATATCCAAGTGAAAAGACAGGAGGTATTCTTCAACAAACTC
GGTTACCGGTTGTTGGGCCAAATCATATCGGTTGCCATAGTAACACTGAA
GTCATTTGCGTTGGTCATGGGTTTGGAACACAGGCTAATGGTAAACAGCA
TCCAAACGCGTGCAAAGGAGATTCTGGCGGTCCGCTCGTCTGCCAACAAC
CCAATGGAAGCTGGAAATTCGTTGGGGTTGCTAGTTATGTTCACACTTAT
TGTAAATACTACACAGCTTACGCTCCAGTCGGCAAATACTTGCCATGGAT
CAAAGAGCATGTTCCTTTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000290_pilon | genome | sc0000290_pilon:142703..144617 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 685-1011:328 |
| Aaloc | 385-681:1053 |
| Aaloc | 55-384:1702 |
| Aaloc | 1-51:1916 |
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