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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000152_pilon:732858..734579+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040068 ID=XLOC_040068|Name=XLOC_040068|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1722bp|location=Sequence derived from alignment at sc0000152_pilon:732858..734579+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAGAAAAAACTTCAGATCGCCTAGAGCTGCTACAAATTCAATGAG
TGACGAGGCAAAATATTGTAGTCTCGATAGAAGAAAAAGCCCTGACCTGG
GTATACAAATAAACAATGAAAGTCGAGATAAGACAATTAATCTAATTCGG
AGTACATCATCCCCTTCAGGTAGTCCAATAAAGAAAGCGTTCAGTAAACA
AATAAGTGTTGATGAATCAGCACCCATTCTAcaaccaaaaaagaaatcac
CAAGCTCCTCAAGTAGTTCACAACCTGTCCATATAGAAGGGAAAGTAGAT
TCACGAAATACTAATGAAAGGACATTACTTAAACCAAGAAGTATGACGAT
AGGTGATATTCCTGTACCTAAGGAACTTGCATCAACATCTAAAGACCAAA
CAACCAAATCTGAGGAGAAAATACCGTTAGGTCTAGAACCAAGAATGAAA
GACAAACCAGATATTCTAACAGCAGAAGAGGCTAAAAAATTTCGAATGAC
TATGTCTCCAACTGACAAAAGTGAAATGTCAAGTAAAAATAATCCTCGGA
GAAGTACTGACAGTGTCACAAACAATAACTATAATAGGCAACCAACGAAT
CCAGCGCATTATGTAATAGCTAAAAAGAAAGGTAATAAAAAGACTCCAAC
ACCACCACCAAGATCACCAGCTAGCCTCGGACTAACACCACAAACCATGT
TTGATTTTCCACCAACGGAACCCAATAATGATATCACAGATGGCAAAGAC
AAAGTAAATAAGACTCAAGATTCAAGTACTAAAAGGAGGACTTATCATTC
AGAAGGATCCGATGATGCGTTTGCCAGCTCTGAACCTTCACCACTACATT
TTGATTATAGTAATATTGATTATTCAGATGAACCAGCATATGGTAATATC
AGTCAAATAAGAAAGGACTCGTCAGATGACAGTTCTTCATCACAAATTGT
TAATGCACACAATGCAAGACGTTGGAATGGAGCTTCAAAACATTCTTCAG
ATCCACTTTGTTATGATGAATGGAAGAAAGCCACTGGAGAAGGACAAGCT
CAAAGTCTACAAAATTTCGATGCGCTAGACAATCTAGATTATATTAATGT
TAAAAACAATACAATTCAAAAGCAGGATTCACACCATGGTTCCTATGTAA
ACGTTAGTACGTCAGAATCTGGGAAACCTGAAATTGGTGGCGATTTAAGG
AACAGAAGGAAACATAAGCCAGCACCTCTAAATTTAGGTAATAAGCAAAC
AAAAACTTATAagaatgaatttgaaaagtatgatgatgatgattcgAATA
TTTATCACCCCTTTGGGGGGTTGGATTCTGCAGATGGAAGTAGCAGTGCA
TCTTCTATAATAAGTCGCAGACCAGGTGGCTCATATGAAAACATGGCTGG
CAAAAGTAGCACACCAAGCAGTAACCATAATAGTGATTACTTGAATTTAA
TGTCGCCAGCTAATGCCACTAAAAGTGGTGGGTCAATTAATTCTTCAAAG
CCATCTATGGACTACGCagttttgactggaaaaatgaCTTCTTATTCAAA
ATCAGTATCGACTTCACCTATCAGGGGTTCAGCTAGATCTCCCATAGAAA
AACCTAACAAAAGTGATTACACTCTGATTGACGGTAAAGCAACCGATGCA
CTGAATCGAGCAAGGGATACTAGAGATAAACAGCTAACAGGAAACAAAAC
ACCGACAAAAACCTTGAAATGA Coding sequence (CDS) from alignment at sc0000152_pilon:732858..734579+ >XLOC_040068 ID=XLOC_040068|Name=XLOC_040068|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3444bp|location=Sequence derived from alignment at sc0000152_pilon:732858..734579+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAGAAAAAACTTCAGATCGCCTAGAGCTGCTACAAATTCAATGAG
TGACGAGGCAAAATATTGTAGTCTCGATAGAAGAAAAAGCCCTGACCTGG
GTATACAAATAAACAATGAAAGTCGAGATAAGACAATTAATCTAATTCGG
AGTACATCATCCCCTTCAGGTAGTCCAATAAAGAAAGCGTTCAGTAAACA
AATAAGTGTTGATGAATCAGCACCCATTCTAcaaccaaaaaagaaatcac
CAAGCTCCTCAAGTAGTTCACAACCTGTCCATATAGAAGGGAAAGTAGAT
TCACGAAATACTAATGAAAGGACATTACTTAAACCAAGAAGTATGACGAT
AGGTGATATTCCTGTACCTAAGGAACTTGCATCAACATCTAAAGACCAAA
CAACCAAATCTGAGGAGAAAATACCGTTAGGTCTAGAACCAAGAATGAAA
GACAAACCAGATATTCTAACAGCAGAAGAGGCTAAAAAATTTCGAATGAC
TATGTCTCCAACTGACAAAAGTGAAATGTCAAGTAAAAATAATCCTCGGA
GAAGTACTGACAGTGTCACAAACAATAACTATAATAGGCAACCAACGAAT
CCAGCGCATTATGTAATAGCTAAAAAGAAAGGTAATAAAAAGACTCCAAC
ACCACCACCAAGATCACCAGCTAGCCTCGGACTAACACCACAAACCATGT
TTGATTTTCCACCAACGGAACCCAATAATGATATCACAGATGGCAAAGAC
AAAGTAAATAAGACTCAAGATTCAAGTACTAAAAGGAGGACTTATCATTC
AGAAGGATCCGATGATGCGTTTGCCAGCTCTGAACCTTCACCACTACATT
TTGATTATAGTAATATTGATTATTCAGATGAACCAGCATATGGTAATATC
AGTCAAATAAGAAAGGACTCGTCAGATGACAGTTCTTCATCACAAATTGT
TAATGCACACAATGCAAGACGTTGGAATGGAGCTTCAAAACATTCTTCAG
ATCCACTTTGTTATGATGAATGGAAGAAAGCCACTGGAGAAGGACAAGCT
CAAAGTCTACAAAATTTCGATGCGCTAGACAATCTAGATTATATTAATGT
TAAAAACAATACAATTCAAAAGCAGGATTCACACCATGGTTCCTATGTAA
ACGTTAGTACGTCAGAATCTGGGAAACCTGAAATTGGTGGCGATTTAAGG
AACAGAAGGAAACATAAGCCAGCACCTCTAAATTTAGGTAATAAGCAAAC
AAAAACTTATAagaatgaatttgaaaagtatgatgatgatgattcgAATA
TTTATCACCCCTTTGGGGGGTTGGATTCTGCAGATGGAAGTAGCAGTGCA
TCTTCTATAATAAGTCGCAGACCAGGTGGCTCATATGAAAACATGGCTGG
CAAAAGTAGCACACCAAGCAGTAACCATAATAGTGATTACTTGAATTTAA
TGTCGCCAGCTAATGCCACTAAAAGTGGTGGGTCAATTAATTCTTCAAAG
CCATCTATGGACTACGCagttttgactggaaaaatgaCTTCTTATTCAAA
ATCAGTATCGACTTCACCTATCAGGGGTTCAGCTAGATCTCCCATAGAAA
AACCTAACAAAAGTGATTACACTCTGATTGACGGTAAAGCAACCGATGCA
CTGAATCGAGCAAGGGATACTAGAGATAAACAGCTAACAGGAAACAAAAC
ACCGACAAAAACCTTGAAATGAATGACAAGAAAAAACTTCAGATCGCCTA
GAGCTGCTACAAATTCAATGAGTGACGAGGCAAAATATTGTAGTCTCGAT
AGAAGAAAAAGCCCTGACCTGGGTATACAAATAAACAATGAAAGTCGAGA
TAAGACAATTAATCTAATTCGGAGTACATCATCCCCTTCAGGTAGTCCAA
TAAAGAAAGCGTTCAGTAAACAAATAAGTGTTGATGAATCAGCACCCATT
CTAcaaccaaaaaagaaatcacCAAGCTCCTCAAGTAGTTCACAACCTGT
CCATATAGAAGGGAAAGTAGATTCACGAAATACTAATGAAAGGACATTAC
TTAAACCAAGAAGTATGACGATAGGTGATATTCCTGTACCTAAGGAACTT
GCATCAACATCTAAAGACCAAACAACCAAATCTGAGGAGAAAATACCGTT
AGGTCTAGAACCAAGAATGAAAGACAAACCAGATATTCTAACAGCAGAAG
AGGCTAAAAAATTTCGAATGACTATGTCTCCAACTGACAAAAGTGAAATG
TCAAGTAAAAATAATCCTCGGAGAAGTACTGACAGTGTCACAAACAATAA
CTATAATAGGCAACCAACGAATCCAGCGCATTATGTAATAGCTAAAAAGA
AAGGTAATAAAAAGACTCCAACACCACCACCAAGATCACCAGCTAGCCTC
GGACTAACACCACAAACCATGTTTGATTTTCCACCAACGGAACCCAATAA
TGATATCACAGATGGCAAAGACAAAGTAAATAAGACTCAAGATTCAAGTA
CTAAAAGGAGGACTTATCATTCAGAAGGATCCGATGATGCGTTTGCCAGC
TCTGAACCTTCACCACTACATTTTGATTATAGTAATATTGATTATTCAGA
TGAACCAGCATATGGTAATATCAGTCAAATAAGAAAGGACTCGTCAGATG
ACAGTTCTTCATCACAAATTGTTAATGCACACAATGCAAGACGTTGGAAT
GGAGCTTCAAAACATTCTTCAGATCCACTTTGTTATGATGAATGGAAGAA
AGCCACTGGAGAAGGACAAGCTCAAAGTCTACAAAATTTCGATGCGCTAG
ACAATCTAGATTATATTAATGTTAAAAACAATACAATTCAAAAGCAGGAT
TCACACCATGGTTCCTATGTAAACGTTAGTACGTCAGAATCTGGGAAACC
TGAAATTGGTGGCGATTTAAGGAACAGAAGGAAACATAAGCCAGCACCTC
TAAATTTAGGTAATAAGCAAACAAAAACTTATAagaatgaatttgaaaag
tatgatgatgatgattcgAATATTTATCACCCCTTTGGGGGGTTGGATTC
TGCAGATGGAAGTAGCAGTGCATCTTCTATAATAAGTCGCAGACCAGGTG
GCTCATATGAAAACATGGCTGGCAAAAGTAGCACACCAAGCAGTAACCAT
AATAGTGATTACTTGAATTTAATGTCGCCAGCTAATGCCACTAAAAGTGG
TGGGTCAATTAATTCTTCAAAGCCATCTATGGACTACGCagttttgactg
gaaaaatgaCTTCTTATTCAAAATCAGTATCGACTTCACCTATCAGGGGT
TCAGCTAGATCTCCCATAGAAAAACCTAACAAAAGTGATTACACTCTGAT
TGACGGTAAAGCAACCGATGCACTGAATCGAGCAAGGGATACTAGAGATA
AACAGCTAACAGGAAACAAAACACCGACAAAAACCTTGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000152_pilon | genome | sc0000152_pilon:732858..734579 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 466-1725:463 |
| Aaloc | 1-462:1 |
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