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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000152_pilon:714833..720237- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040067 ID=XLOC_040067|Name=XLOC_040067|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5405bp|location=Sequence derived from alignment at sc0000152_pilon:714833..720237- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAATTTAACCAAGGATATGATTTCAATATTCATAGTATTGATCGT
GGCACCATGCCTGGTATATGCAGGTAAGCGTAAATTTCACTTAGTAGAAT
ACAAAATACTTTCCGTCTCCCAAACCAAAATTCCGTTGGCCACTCTCCAC
GCTTTTTTTTAATAAGAATACACTTTATAAGAATGTCCATGATGAAAATG
ACCAAAAAATTAAGAATATGCTAAGAACATCACCTTCATAGAATTACTTA
AGTTAAGAATGGCATTTTTAGACCATTTCAAATTATAAATCGTCAATTAG
AATCCTAACCCAAGAATGCTGTAAGAATATTTTAGGATGATTTTCCCAAA
AAAGTTAAGAATATCCATGATGAAATGGAATTACACCATTCTTATAAAAA
AAAGCGTGTACTAGAGATAGGTTTTGAAGCGATCTGGGACATCTAAAATC
ACCGCTTAAAGGACCTCATTTTAAACGGTGATTTTAGATGTCTCAGAACG
CTCCAAAACCTCTCTACTCTACTCTCCAACGGAAGAATAAAACTAAGAGC
TTTAGAAAATCTGAATGAAATAAAAATTCTACGAATACACCTCTAAAAAT
TATTTTTGAAATAAATTGTCGAGTGACAAATGTAACTTTGAAAGTATGAT
ACAATTTTTCTATGTATGACGTAATTTATGAAAAAGGCTGCATATTCCAA
TCCGAAAAAAGGATGCACGGAAGTCGCATAAAAATCTCGTAACTGAGCCA
ATATTGCTCCACTTTTTGATTTTACTAATGATGGAGTGCTATCAGAATTA
TAAAAAAAGCGAACAAAGGGGCTGGGTTCAAGTTTGGAAAGGTCAAGAGA
AAGGTCACTTTTACTCAAACTCTAGTAGCGCCCACGACTAACAAACGTCC
ATTATAAAATCAAAGAGCGCCGCCCGGTGTGCAAGTATCAATGGGTACGA
AATTGACTTTTGTTGCCTTTGTCACTTGGATTTTGGCCTTTTTAAGTTCT
ACCTAGATCCCTAAACTACATATCAACATAACCCTCGGAGGACTAGAAGA
AAGAAATGTAACTAATAATTTGATAGCCTTTTTAAGAGGCCCTTAATTCC
ATTGTGATATAATATAAAAATCAAGAATGAAACCATTTATGATGAAAAGG
ACACTTGTTTGTAAGGAGATGACGCATTTGTAAACTGTAATTTGAGAAAC
CTTTCATCTTTATTGTGTTATCGTAGTAAAGGGAGGCATTATATCTTTTA
TCTTTCTATGATTCATCCAATACTCATAGATGCGCTAAAACCAAAATAAA
TCCATAGGCTATACTGAGGCAAAATCTGTTAATAGTAAGACCTCCAGTTG
ACCATCGAGTAAACAAGCGAATTCTATAACAGTCAGCTTAGGCAAAGTCT
TTGGCTTGGGCTAGGAATGTAATTTCCATCCAAAAGGGTAGGCTAAATAA
AGTCCGGTAAAAGAACCAAATTTGACTGATATAAAAATTGTCCACATAAG
TTTTATGTAGTTCTTTAATTTTTTTTTTGCCAAATCAAATTGACCTAAAC
TTATTGGACATTACTTCATACACTTCGAAGTATTTCCAATGTCAAGCCTG
TGTATTATTTCCGTTCACATCAAATATATTACATCTCAATCACGCATAGT
TAGGCTGTAGCTTAGTGGCAAGTAGTGTAGCAAAAGAAACTAAACATTCA
AAAGACACAATATGTTGTCAATGTTAAGAATTTTGATCAAGAACGCATTC
TTCAGAAATTTGCGGTATAATCTCTCATAACTCAACAACCATATCGGCTT
TCTCGATGAAGTGTTTATAAGGAATTTAAAAAATGTTACATCAATCATTA
TAATATGTTATTGTTTCCAAAAGAGCTGCTGTTCGATGAGTATGATTCCC
ATCAACTAAAAACAACAACAAATGAAACATAATGCTAAAAAGGCTAACGA
ATCCGTGCCCCTTTTTAAGGCCACCCAGAAGCACCCCTAATCACGCCATC
ACGGCAATTTGATCCTCTCCTCATGATCATGAAGTTCACTAAAAACTTTT
CGTTACTCAAAAATAGCGAAAAACCCACATCACTCCTCGAATTTCACGCA
TAATATTTTTGGAGTCAACACGCAGAACTGTTTGAGCGGGGGAGCTTCTT
TAGCCCGGGGCTATTTGGTTGATTCCGTATAAATTATTACGTCATGAATA
TCATGAATAAAAAGGAGATATCTCTTTTTTTTCACAGGTTATATGAGCAG
AATCGGTGTCTGTCCCCACCCAACCACCAATTTTGTTTTAAAAGATACTC
GGTTAAATTTCTATGGTCTATCGTACATCTTACCCGGAGATGAGAGTCCA
CCTTGTACCATGTCAGAATGTCAATTAGATACTGATTGCCATGGCGACCA
TAAATGTTGTTCTAATCATTGTGGTGCTTATGTTTGCACGGAGTCAAGTA
AGTATAACATGAAAACATTTATAATGAAAAATTTCAAATCTAAAAATATC
TAAACTTTGGAGCAGTTCTCCAAAACATATATATGAAGATGAAAGGAATC
TGCAGGCCAAAGATTTATAACCATATATGATAAAATCCTGAACATCAAAA
ATTATTCTTGTACATTTCATTGATGTGAATAATTTTGATGAAGACCTCGG
TCAGCCTTTCTGTTTTGAAGAATTGATCGCTTTATCCGTTTTCCTATGCT
CCATACCAACTTGGTTTTAAGAGCTTCCTCAAAGACTTCAATATCAAAAC
AATTTGAATTTCTGTGATTTTGACATATACCACTGTTTTTCGACTCCATC
CTTGTTTTTGTGTTTTCTCCAAAGATAAATGTTCCTTGTGTTATGATCGA
GTAAGCCTAAAATGTTGAAGAAATATTCTTTGATTCTATTTGGTTTTTTT
GTTGTTTTTTAGTGAGAGAGCCACGTCCATGCCAGGTAAGAAAACTATTT
TTTGCTGAACTACAAGTCCTATATTACTCAATTACTCAAATTACTCGAAA
TGGACTTGAGGGGGGGGGGGGGGGCGTGTACGGGGTTTGCGATTTCCTAA
ATACTGAATAATTTTGCTAAAATTTCCAAGATTCCGTAAAAAATAATTGC
AATTCTGATACCGATTTTTTTTGCATTTTTCCTCGCTTTGACTAATTTTT
CATCAAATTTGATTTTTTATGAATTCCGAAAAAGGGAGATAAAAGCTTTA
TAATACCGAAATTCCGAAGCAAATATTCATGGATCTCCTTGAAGCACTAT
TAAGCTTTCATTTGATCGAACTTTAACTTAGCGACGAAAACTCGTTTGCT
GTAGCTTCATCAACGAATTTGGTAACTAGAACTGACTGACGCAGATTTCT
GCGCTCGTATTTTGATTGGTTTAGAAATATTGAGAAATCAGTTATTTTAC
GCGAAATAACTTTTGGGAATTCTCCATATCACAAGATAAAGGGTGATTCA
GCAGAGATGTTAACTCCCATCCCCAACCCTAGCCCTAGCCCTACCTGACC
CTACCTGAAACAACCCTTTAATCTAACCGAGAAATTTGACTCTACTACCA
ATTCAATCCAAAACATAGGTCAAACATCGCGCGGGTCGGCGGGGCAAAAA
TTCTAGATCGGCGGTTGGTTTAGCCTGGACTTGTTAATTTATTGCGCGCA
CAGGCCCCGACAAAGACAAAATCTTTTCGATCAGTAGCTTTTTAAAGGTC
CATTCTGCTGCGCGCTGAACCAATTATTTGTGATGAAAGTTAGCACTACA
AGTTCTTATTTTTGAATATAGTTTCGTCTGCTATCTTCGATCAAGCTAAT
GAATTAGTGACATTCGTCTGTCTGGGACGACGGTCTGGGACTGCTAGTAA
TTTTATAATAAGGGGTGTGTAAGTGAAATCTGGCTGCTCTTACCAATATC
CACAGGAAAATAAGAAACCGAATCATTCGAAGCTATTGTAGATGAATATA
GAAAAGGATAAATTTAAAATTCATATAGCCTTTTTGATGCGAGGGAGTTA
TTTTGATAACTGATTGTCATCGAGAGCTCTCACTATTTCTTATTTTAGTA
TTTCACATGTCCTATAACAAAAACTTGTAAGATCCAAAAAGTGCAATGCG
TCGAACCCTCATGCCCTGAGATGTTGACAATCGCAAGACCTATGTGTGTA
AATGGTGGTCCATACTGGGGTAAGTAAATCTAAAGAGTAACAGTTGGCTT
TATTCGATTTATCTCACGATTTATTCTTTTAGTTCTTGGATATAATCTCT
TGAAAAATTTCGTATCCCTATGATATCCTCTCGTGTAAAATTGCCTAACC
TACGACCCCTCTCCGGCGGGAAATCTTCCATTCTTATAAACTACCCCTCG
GATATCTGAAGAACTAGTCTATGGATCGCAGATCTCTATAGATACACCTC
CCATCTAGGAAACTATAAGAAATTCTTTTCACTATATGTTCTTTTTAAGA
ACTTCCAAAATTTTTTAAGCCTTCGGATGTTCTTAACATGTTCTTATTTT
CGCCATTTTTTGAGGATTTTTTGAAAAGAAATCATGCACTTTAGAGTCCG
CAAAGCCTTAAATGTTCTTACTTTGTTCTTAACATTTTTGTCATCGAGGG
CTTATGTTCTTATACAGTTTGTTCTAATAAAAACGTGTAGAGAATGTACA
GAAGCTTACCGAAGAGCATTTTGACACCTGGATAAGGGGGAGGAGGGTGC
TAACTTTTTGCAAAATCCCATTGACGTTACCCTATAAGCATACCCCTAAT
CATCAACCACTTTATATAAATAATAAAATCTTTTTTTATTTGCTTTTCAT
AGAAATGACAAAGAGGAAACGATGTAAGTGACCTATCATTCAAGTCCATA
GAAAATTGTATTTTATGAAAGAGTTCTTTGGTTGTAGGGGAAATAAATAA
GGGTATAACATTTGTTTTGCCTAAAGGGAGCTCGGCCGTTCGAAATTCGG
GATAATTTTGGAAAAACTAAATTTCAGGTAAATATTCTGGTTCGAAAACA
ATGAAATTCAAATCCCCAGCCATAAATAACAAGGGAATATCAATCCCCAT
CGAGTTTTGGTCCGTTATTTTTACCCTCACTGGCTGAAGAAATCCCACCG
GGTCTGTGAGAAGGGGGTGTATTTAATCACGCCAGAATTACTATTTTTGA
TGATATAAATATGAATCTCATAATATCTTTTCTTAAGCTCGTATATTGCG
TCCAGATATATTCACACAAGAGGTGCCATTCATATCAACTAACAACGCAG
GTAGCAGCAGAGATATCAATGAAGAGCGTGAAAACTCTTGGTTGTTAGCT
TTAACTCCTTTTTGGAACGGTGAGAAGGATTGGAAAAGTTCAACTGGGAG
CACCTCATCATGGTTAGATTACTATGGGCGCAGAAAGAGAGCTACTAAAT
CTTAA Coding sequence (CDS) from alignment at sc0000152_pilon:714833..720237- >XLOC_040067 ID=XLOC_040067|Name=XLOC_040067|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1332bp|location=Sequence derived from alignment at sc0000152_pilon:714833..720237- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATAATTTAACCAAGGATATGATTTCAATATTCATAGTATTGATCGT
GGCACCATGCCTGGTATATGCAGATGTATAATTTAACCAAGGATATGATT
TCAATATTCATAGTATTGATCGTGGCACCATGCCTGGTATATGCAGGTTA
TATGAGCAGAATCGGTGTCTGTCCCCACCCAACCACCAATTTTGTTTTAA
AAGATACTCGGTTAAATTTCTATGGTCTATCGTACATCTTACCCGGAGAT
GAGAGTCCACCTTGTACCATGTCAGAATGTCAATTAGATACTGATTGCCA
TGGCGACCATAAATGTTGTTCTAATCATTGTGGTGCTTATGTTTGCACGG
AGTCAAGTTATATGAGCAGAATCGGTGTCTGTCCCCACCCAACCACCAAT
TTTGTTTTAAAAGATACTCGGTTAAATTTCTATGGTCTATCGTACATCTT
ACCCGGAGATGAGAGTCCACCTTGTACCATGTCAGAATGTCAATTAGATA
CTGATTGCCATGGCGACCATAAATGTTGTTCTAATCATTGTGGTGCTTAT
GTTTGCACGGAGTCAATGAGAGAGCCACGTCCATGCCAGTGAGAGAGCCA
CGTCCATGCCAGTATTTCACATGTCCTATAACAAAAACTTGTAAGATCCA
AAAAGTGCAATGCGTCGAACCCTCATGCCCTGAGATGTTGACAATCGCAA
GACCTATGTGTGTAAATGGTGGTCCATACTGGGTATTTCACATGTCCTAT
AACAAAAACTTGTAAGATCCAAAAAGTGCAATGCGTCGAACCCTCATGCC
CTGAGATGTTGACAATCGCAAGACCTATGTGTGTAAATGGTGGTCCATAC
TGGGAAATGACAAAGAGGAAACGATAAATGACAAAGAGGAAACGATCTCG
TATATTGCGTCCAGATATATTCACACAAGAGGTGCCATTCATATCAACTA
ACAACGCAGGTAGCAGCAGAGATATCAATGAAGAGCGTGAAAACTCTTGG
TTGTTAGCTTTAACTCCTTTTTGGAACGGTGAGAAGGATTGGAAAAGTTC
AACTGGGAGCACCTCATCATGGTTAGATTACTATGGGCGCAGAAAGAGAG
CTACTAAATCTTAACTCGTATATTGCGTCCAGATATATTCACACAAGAGG
TGCCATTCATATCAACTAACAACGCAGGTAGCAGCAGAGATATCAATGAA
GAGCGTGAAAACTCTTGGTTGTTAGCTTTAACTCCTTTTTGGAACGGTGA
GAAGGATTGGAAAAGTTCAACTGGGAGCACCTCATCATGGTTAGATTACT
ATGGGCGCAGAAAGAGAGCTACTAAATCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000152_pilon | genome | sc0000152_pilon:714833..720237 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 451-666:217 |
| Aaloc | 430-447:602 |
| Aaloc | 307-426:1358 |
| Aaloc | 286-306:2492 |
| Aaloc | 76-282:3167 |
| Aaloc | 1-72:5406 |
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