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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:530206..538142+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040060 ID=XLOC_040060|Name=XLOC_040060|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7937bp|location=Sequence derived from alignment at sc0000088_pilon:530206..538142+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAAAGGCAGTAACTATAATTTTCACATCCACGACAAGTTCTTGCC
ACCACGGAACACACAATTCGCTAGACATTATATACTGAAGAAACAACGAG
AACAAACGCTTAAAATGCGCCAGGTAggcaaaattttcatctttaaacAG
GATTCTTTTACTTTGCGATGTTTGTGTAGTATACGATTCATTTCAAATGA
TAGATTTGACACATAATAATGATGTCAATGGGTAATGAGCAACGCTTCCT
GTCTAATTTATGTAAGGCCCGAACCAACAACCTTCCGATCGGGAGTCAAG
CCCGTTACCAGTCTACCACAACTACCTGGTAATGAATGGTTTTgtggaaa
ttttctttttgttataaataaagcatttttttatttaaggtGAATTTGGT
AGCATACGATGTTTCAATGGTGAAGTCAGCCCCTAGTCCAACCTACTGCT
TCTCAAAGGTGCCTATTATGTGGTTCACTATTTAGTCGATTTTTCCAAAA
CCAAAAGTTATAGAGAAAATTGTTCGATTTACGTAGCTTGGTGATGGTTC
AATGTATAGCTTTTAGGTAACAGGGTCTCTCCTCAGTGAACAGTTATTTC
GAGAACAAACTCGCGCACTTTCCTTTGGTTTGATACTGTTATTTATACAT
TGTCGGCCAGGATAACAAGCATCGGCTGCaaacattgattttcttttccg
TTCTTTTAGAGTTGCCAATGTTCAAGGGGATCACCTCTCTCCGAACCAGA
TATTCCAGCGTAAGTTTTCTTGAGTTTAGATTCCAAAACAAATAGGTCCT
ATTATTAATTACAAGTAAGATTCGTCGCTCAATTTAGGAAAAATATAGGC
CCCCTCCTTACACACATTCATTTTCTCGGTCGAGCTTTGAAAATCTCCAA
GCAAATTCAAGCAAAATTTTGCGTCGATGCAACGAATTCCCCAATTTTTT
GCCCAATTTCAGCTTGTGTTTTACTTTAAAGGCTTTTTGTTGACCGAAAA
AATTAGGTTGATTAGGTTGAGTAAAGACCCTTAAAGACTTATTTTAAGAA
ACTGGCTAGCTACTGGTATTTGATTCCCTTATGCATTTTCAAGGTTGCGT
TTACCGAAGGCACAACGTAGCCCGTACGCTGAATGCAATTCATATCGCCA
CTATACACATACGTACCTACATCGAAAACCAAGAGCCGCCAGTAGCAACA
CAGCGAGATATCAAAGAGGGTTAGTTAACTATCAAAATTATACATCACGC
CAGACGAGACAGATTTCTCCAACTACACCTCATTCGACCAGCTATAATTT
GGATTACCGAGGGCTGAAACAATGCTACCGGAAAATATGCAACGTAAGTT
TGTAGAGTTTTAAACCCATAGAAAAGTAATTAGAAGCAAAGTAACTTGAG
AAGTCtcctaaaaaatcatttaacttATGGAGAGTTGATTGGCCATTTAC
TTGCGGACTGCTTAAGAAAATCTTCCTACCCATTAAAGtgttagcgagtt
tatgtgtttgtgcttttgaggacggtaaagtgtctgaagcgatttggaat
aaccttCAGTtctgccccgcaaaatcgaggacggtaaaattgCTGATTTA
CCATCGTCCTCAGCTGGTTAGGATCTAgtaaaattagaaccttaccgtct
ccgtcgcagaaaaacacatatacataaactcggtattattcATATGGAGA
CAGGACCGGACACGGAAAGAAATAAAACGCTTATACGATTTTACACGGGT
CGGAACGgctttatttaatttatttcaaacttCTAATGCAGATGATAGAA
TATTCCTATTTATAAGATTTACGATGGAtgtaatcattcaattgttttca
GATTTATTGTTTGTGTTTCATAGTTCCATTTTTGGGCCtgcctggaggtc
ctataaattaacctttgtccgttcgtccgttcgtatgttaccagcttttc
tcgagattggctcattagttttttctaatttttggccTAAAGGTGCAAAA
TAGTAATGcgtaaaatgtgacggagcccaacaTTACAAAAAATAGTTCTA
ATTTCATACAGTAActcaagtggattaattttagcggaAATTGAATTTGG
GAAATTTCggcaaattaaatccccgctaaaattttctttgtgatTCGCTC
GCCAAAATTTAGCAATAAGACAATTTTATGACAGTTATCACTTGTGCGTT
GATTTCATGcattttccatgattttttgTTTCTCCAATTTCCAAACTCGG
CAAATTAAATCCCtgtcaaaaatcattttttggcCATTCGTTAAATTAGA
TCCACGCAAAAAGTTTTATCCACTTGAGGTAATTTTGAAAGTATCCCCGA
AAATACACACCTCCGAATATTTTGAGGAATGAGCAAGGCTGGCCccgtaa
aattttctttcgggCTTTTTATGAGGATCAGAACTTTGTGTTGCTTTGCC
ACCTCGATTTTATCGCAGCATCTTTGCGCAGTACCATCCGAATTTTTGTA
ACTTTAGCGCGCTGGTatgttgagaaaatttttgtgaaaatgaacCCAAA
CGCACAAATGTGTTAACAATGATAATGCCCGATGATATTTAgcgtttttg
attttcaattgaaCTAATTATTCTAGTATCTGGAATTCCTCAGAACTCAG
AAATTGCCGGAAGAGCTGAAGATCACTAGGAAACCGTCCGCTCGTCCGTT
CtttttttCACGATCTTTTCCATTATCGCTTTTAACTACAGTCGACTTTT
CATAACTTGAACCTCTCAACTCAATTATCTCCATAAACTCGAACGATTTT
TCCGGTCTCTTGAGGAGATTCTTAGGCTATTCTGTCTCTCTATGACTCGA
ATTTCCGTAACTCGAACGATTACTGACTACTTGCTCtaactttaatcatc
aggtaggtctaATCAGCGTTTCGGCTTGTTTTCTTTAGGATGATGTCGAA
TCATTCAAATTGCTACTGAAGAACCAAGAGCGTTTTGGAAAACCAAAAAT
TCCTTTGTCAGCAAAGCACCACAGTGATAGGGTAGTCATTCACAACAATA
ACAACGGTTCattccccccaaaaaagtgagtcattaaaagttttctttct
tctGTTCGCCTCTGATTACTACTCTGACCACGCGTTTAATCTCTAGGGTT
TTCTCACCGtttttttCTACagactttctttctttctttaagaacaacaa
aaaatttgattctCATAAATTCTTTTAATATTCTTGTTCATTATTTGGtg
gtttttaagaaaaataaagtaaaagacCTTTTCAGCCCAACTTGAGCCCA
Atcaatttataaaaattacttgaaaaaatttttacaagtaaaaaaaaact
ttatttccgTATGATTTCGTAAGCATTAGTGAGACTAGCTATTTTTATGT
TGTTTTCGAATCTTCCCACAAAGCCTGTAAAACAAGAGGTTTAGTCTTGT
CATgtactttatttattttctaatcaactgatgaatgcgaaagcaagaaa
ctttaagtattgaaaagaaatacaacgtttcttaatctttatgtacTTTA
TATGTGTGTATATTTTTAGAGGTGAACAATTTTTGTCAAAACCTAAGCCC
ATTTACAGACAGATTCCTCTATACGAATgtacgaaaataaattttggacG
GATCATCTCttctcattttttctttcaatgtttttttcacataaaaacaa
ATACCCTTTCATTATAGATCTATAAAAATTGTGACAAATACTCTTTGACT
ATGTTTTGTGTTCTAGTCTAGTGCTAGTGCCTGAATGATCAAATGGTAGC
ATCGGGTAGCATACTCTATGAAAATAATTGGACATTATGATTCGTATTTT
TCTTTGAATAGAAGACGGTTTTACATTACATGGCTTTACACTTCATGGCG
AATTTCTTATGTTCTATataaccatagtataagaaagctgcGGCTGGAAT
ATCTACCGCATTGTcgtttcagttaattgctgttccatctctgtctccga
gctttataagaacatcaagatgctcagtttatcattggtagatagttttt
gaaaattttctcttactttccttcacaaaaagtctttttgttgctagata
tctttgaatctgtacccaatagaacacttgaactaattttggacatattt
taggggtattttgtggaaacaatagtttttcgccaaaattgaaattataa
gaactatattcaagatgacagctttcttgtcagtttgaatgataaatttt
gaaggtgctggcttgaaactttcacagtattatctagatgtactttttca
ttgatttctaaaaagatttcactaaaatattgcGAAGGCACTCGAGGcac
tttgtttacttttgagttctttcagcccagccattttgtgcttgtttaaa
tttcttattgttgatctttcctttacgatgattttataatgcaagtgtat
tatcaagggtatatcattaatgtctaaaacacactgagaagtaagtatta
acgacaaaccaataaaatttaccattaaagatgctacattactgatctct
tgataaaaaaacagtcatcaaatacgacagagatagaacaacagaagttc
agatgttatcattccagccgcggctttcttatactatgatatAACCCATC
ATCTAGATTTTGATGTATAATGGAATCAACTTCATTTCTGCCAAgacttt
actcttaggtgccaaataaacggggccccacgcttgttaatttttcgatt
tttttccaacccccccccccggaccttattaggaccccccccctaggacc
ccccccccccccgttttgaccctttttaggggtttttaaaggtccatttt
ccaaccccccccccggtaattaggcccccccccgtttatttaatttgaaa
atttttccaaccccccccccccccccctccgtttatttggcacctaagag
taacgaTTAAAATGTCCTTTTTCAACTTAAAGGATCTATTCTAAggttat
ctggtaccagatttGGAAATATGCTACGGCGCACGCTTTGcctctgaagg
tcgggcatatttCATCATCTGGAAGGTTAGGGTTATAGAAGTTTACTTGA
CCGGAGGGGAGGCCCGAAATcttcgagttagcaattttcgagttagcaat
tttcgagttagctaaattatgacgtcataaaagtgcaaattatgacgtca
ctcgaatttctttcatttataagttttcgagttagctatctCGATATTTT
CTGTGGAAAACGTTTCTAGTTAACTAACtaagaaattcttaaaattattt
ttggaaagatTTTGGAGATGTCACTGGGAAACGCCTGTGAAAAGACTGGA
GATTCTCTGGGTTTTTCATTTATGTTAGTTCAAGATGAAGTGGTTAATAA
TTTTCGAATGCAAATTTAATTTACGCTTTCGTAATATTGATATAGCTAGT
TTAAAGCGCCaatcaaatctgaaaaaagtaattcatagccaatttatttg
taaaaaacttGTGAGAAACTTGTTCTCATTCAACGATTCGAAtttttttG
GTCTCAATTAACGTATAAGCAAAAATGTCAATCGAATTTCATAGTTTTCA
ggattttaaaagtgatttcTTCAATGTgctgtaaaattacaaaattgggc
TGTTCTGTTGGCACACAAAATGTGAAGTTAATCGTAAATAAGATACAAAC
TACCTATACAGAACCTTAGCCAAGTTGTTTGAGCTTGTTTAAGTTGAGAT
TAAGCAATATCTTCATCTTTCTAAAGACAAACTTGTCTGTTTGTACCGCT
GATAGAGACTTTGACTGTGTCGGTTATGTTCGGTTGGCTGGCCCTCAACA
GTCATTTTAAGGATAGTACCAAGATTATACCAACATAAAAGTTACTGAAA
AACATAAGGAATATACCTGTTATTGTTTCTTTATAGTCTTCGAGTTTGGC
TATAGAGTTAGTTTTTGCATTCCGACGCAGCAgaagttttcatgctaaat
ttctGTTCAGTTGGGTTGAACAGAATTATTTCAGCAAGCGCAGAGATGAC
CATTAAACCGGATTGTTGTCGGTACATCAAAGGGTGACTTTAGCCTTTAG
CCTAGGCGCctccaatccgccatcggaatatcagataaattcTAAGGCTT
CTCTATCAGCAACGTCAGGATGTAAGTTAAGACAAAGGGAAAAAGCAGTA
CCGTGTTcctatcattatttctcaatttaaaggattttaggtatgacgat
tcgaagacaaaaattatccattgttttactccaggACCTCACGAAAATCA
GTGATTtagaatggaattttcaacaatttAATACCGAAacatgacatttt
aatgtaaattttaaacattatgTACTAATTTAAAGCATAAGTAAATTGGC
CTCTGgcggaataagggccggtgtaaaaggggccggcggtaaattagggc
cggcgtaaaaaggaccAATTAGGTATTTGAAAGCTCTTACAATTGTCAAT
GATAGGTGTGAGAGAGGATGTTCATTATGAAGTCACAATGCAACTTTGAA
CACTTCCTTTGGTCTACCTCTGTTAGTTACTTCGTTATCTCTCTTTTAGA
GCACCATTTGTTCCACAAACATTCTTAAGGGgacaaaaaaagaagataag
cgTATCTCCATCTCACATGGATAAACTACTGACCCATAAGAGCAGCAAAA
GCAGTTCACCAGTTGAAGCTAAACCTGCAAAGGAAAAACCAAGTCCtact
caaaacaaacaaacgccAATTCCACAAGAAGAGAAATTACCGAAAATAAC
AGAACCAACAGTCATGATTAGTTTACCGAGCACCGTTTCGTCACCCGTGG
CAACAACCACAACGACAGCAGCCGATTCGACGACGATGTCACGTGACGAG
TTCATTAGTATCAATGAATCGATGCTGGAAGATGATTTGATGGCAGTCCC
GTCAGCTGAAGGATTACTTCTATCTCGTTCGTCCTCTTCTGTTTCGAACA
TTATCGAAGACATGATAAAAGACcataaaattaaaactgaaaatgatGAC
GAGAACGTCGCGGTAGCAGGCGATGGAAACGGACATAATCAACACACGGT
GTCTGATGAAAAAGAGGCGACATCGGTTTCTGTAGAAAAGCCTATTGTTA
GTGATGCAGATATTGTTGAGAAAGGACTTTTCGCGTCTCAAGAGATTGGC
TTTCAAGTCATGGATGAAAAtggtgaagaagagaagaaTATCATCTGGCA
TGATCCAGGTATGATTGAACGTTGAGCTTCTCAGGCTTTTGCTCATATGT
TATTTCGATTCGCAAATCTCCATAAATACTTCCCATATTGGTTCATTTTG
CTTCAGATTCGAACGCCGTAACGCGTGAATATTTTCTAAATTGGAATTCT
TGAAATTACCCTTGACCTTTTTAAATCGAATTGTTAAAGATGGGATAGAC
CATGAGTAAAATTGCGCTTGGTCTTATATCTACCTTTGGAAATTTACCct
ttttgctaaattaaaaaaaaaatcttttggagcACGTCATTGAAAACTGC
AAAATAATGCTTAAAATAAATTGAATTAAATTGGGGCATCTCCTTTCTTA
ATAATGGCATTTATTCATCTTTTTCAGAACAAGAACAAAAAGATCAAGAA
CAATCGGAAGCTATTCTGGTGAGTTTATTCAACAGTATCCTGGCAAATAG
AGAACAGGTTTTCTTAAACTCGAAAATAGACAAAATCGTAATTTTCATAG
TAAAAATACCTCTTATCAGACAATCAGACACCTAAAGAATATGATAATTA
CTAAAGCATACCTTAAATCTTTTTTACCATAGAATTCATCAAAGAAACTT
GCAGCCAgaagaaaatctgaaattaaACAACTATTGGAAGAATACTCAAC
GATAGCCCATGAACTTGATCAAATGACTGTTAATTAG Coding sequence (CDS) from alignment at sc0000088_pilon:530206..538142+ >XLOC_040060 ID=XLOC_040060|Name=XLOC_040060|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2868bp|location=Sequence derived from alignment at sc0000088_pilon:530206..538142+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAAAGGCAGTAACTATAATTTTCACATCCACGACAAGTTCTTGCC
ACCACGGAACACACAATTCGCTAGACATTATATACTGAAGAAACAACGAG
AACAAACGCTTAAAATGCGCCAGATGGCGAAAGGCAGTAACTATAATTTT
CACATCCACGACAAGTTCTTGCCACCACGGAACACACAATTCGCTAGACA
TTATATACTGAAGAAACAACGAGAACAAACGCTTAAAATGCGCCAGgtGA
ATTTGGTAGCATACGATGTTTCAATGGTGAAGTCAGCCCCTAGTCCAACC
TACTGCTTCTCAAAGgtGAATTTGGTAGCATACGATGTTTCAATGGTGAA
GTCAGCCCCTAGTCCAACCTACTGCTTCTCAAAGAGTTGCCAATGTTCAA
GGGGATCACCTCTCTCCGAACCAGATATTCCAGCAGTTGCCAATGTTCAA
GGGGATCACCTCTCTCCGAACCAGATATTCCAGCGTTGCGTTTACCGAAG
GCACAACGTAGCCCGTACGCTGAATGCAATTCATATCGCCACTATACACA
TACGTACCTACATCGAAAACCAAGAGCCGCCAGTAGCAACACAGCGAGAT
ATCAAAGAGGGTTAGTTAACTATCAAAATTATACATCACGCCAGACGAGA
CAGATTTCTCCAACTACACCTCATTCGACCAGCTATAATTTGGATTACCG
AGGGCTGAAACAATGCTACCGGAAAATATGCAACGTTGCGTTTACCGAAG
GCACAACGTAGCCCGTACGCTGAATGCAATTCATATCGCCACTATACACA
TACGTACCTACATCGAAAACCAAGAGCCGCCAGTAGCAACACAGCGAGAT
ATCAAAGAGGGTTAGTTAACTATCAAAATTATACATCACGCCAGACGAGA
CAGATTTCTCCAACTACACCTCATTCGACCAGCTATAATTTGGATTACCG
AGGGCTGAAACAATGCTACCGGAAAATATGCAACGATGATGTCGAATCAT
TCAAATTGCTACTGAAGAACCAAGAGCGTTTTGGAAAACCAAAAATTCCT
TTGTCAGCAAAGCACCACAGTGATAGGGTAGTCATTCACAACAATAACAA
CGGTTCattccccccaaaaaaGATGATGTCGAATCATTCAAATTGCTACT
GAAGAACCAAGAGCGTTTTGGAAAACCAAAAATTCCTTTGTCAGCAAAGC
ACCACAGTGATAGGGTAGTCATTCACAACAATAACAACGGTTCattcccc
ccaaaaaaAGCACCATTTGTTCCACAAACATTCTTAAGGGgacaaaaaaa
gaagataagcgTATCTCCATCTCACATGGATAAACTACTGACCCATAAGA
GCAGCAAAAGCAGTTCACCAGTTGAAGCTAAACCTGCAAAGGAAAAACCA
AGTCCtactcaaaacaaacaaacgccAATTCCACAAGAAGAGAAATTACC
GAAAATAACAGAACCAACAGTCATGATTAGTTTACCGAGCACCGTTTCGT
CACCCGTGGCAACAACCACAACGACAGCAGCCGATTCGACGACGATGTCA
CGTGACGAGTTCATTAGTATCAATGAATCGATGCTGGAAGATGATTTGAT
GGCAGTCCCGTCAGCTGAAGGATTACTTCTATCTCGTTCGTCCTCTTCTG
TTTCGAACATTATCGAAGACATGATAAAAGACcataaaattaaaactgaa
aatgatGACGAGAACGTCGCGGTAGCAGGCGATGGAAACGGACATAATCA
ACACACGGTGTCTGATGAAAAAGAGGCGACATCGGTTTCTGTAGAAAAGC
CTATTGTTAGTGATGCAGATATTGTTGAGAAAGGACTTTTCGCGTCTCAA
GAGATTGGCTTTCAAGTCATGGATGAAAAtggtgaagaagagaagaaTAT
CATCTGGCATGATCCAGAGCACCATTTGTTCCACAAACATTCTTAAGGGg
acaaaaaaagaagataagcgTATCTCCATCTCACATGGATAAACTACTGA
CCCATAAGAGCAGCAAAAGCAGTTCACCAGTTGAAGCTAAACCTGCAAAG
GAAAAACCAAGTCCtactcaaaacaaacaaacgccAATTCCACAAGAAGA
GAAATTACCGAAAATAACAGAACCAACAGTCATGATTAGTTTACCGAGCA
CCGTTTCGTCACCCGTGGCAACAACCACAACGACAGCAGCCGATTCGACG
ACGATGTCACGTGACGAGTTCATTAGTATCAATGAATCGATGCTGGAAGA
TGATTTGATGGCAGTCCCGTCAGCTGAAGGATTACTTCTATCTCGTTCGT
CCTCTTCTGTTTCGAACATTATCGAAGACATGATAAAAGACcataaaatt
aaaactgaaaatgatGACGAGAACGTCGCGGTAGCAGGCGATGGAAACGG
ACATAATCAACACACGGTGTCTGATGAAAAAGAGGCGACATCGGTTTCTG
TAGAAAAGCCTATTGTTAGTGATGCAGATATTGTTGAGAAAGGACTTTTC
GCGTCTCAAGAGATTGGCTTTCAAGTCATGGATGAAAAtggtgaagaaga
gaagaaTATCATCTGGCATGATCCAGAACAAGAACAAAAAGATCAAGAAC
AATCGGAAGCTATTCTGAACAAGAACAAAAAGATCAAGAACAATCGGAAG
CTATTCTGAATTCATCAAAGAAACTTGCAGCCAgaagaaaatctgaaatt
aaACAACTATTGGAAGAATACTCAACGATAGCCCATGAACTTGATCAAAT
GACTGTTAATTAGAATTCATCAAAGAAACTTGCAGCCAgaagaaaatctg
aaattaaACAACTATTGGAAGAATACTCAACGATAGCCCATGAACTTGAT
CAAATGACTGTTAATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:530206..538142 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1330-1434:7833 |
| Aaloc | 1291-1329:7630 |
| Aaloc | 631-1287:6601 |
| Aaloc | 493-627:2939 |
| Aaloc | 244-492:1095 |
| Aaloc | 193-240:710 |
| Aaloc | 124-192:390 |
| Aaloc | 1-123:1 |
|
