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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000566_pilon:85212..88535- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040056 ID=XLOC_040056|Name=XLOC_040056|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3324bp|location=Sequence derived from alignment at sc0000566_pilon:85212..88535- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAATAATGAAATTAATTATTTTGTTGTCGATCGTTTCATTGGCTTA
TACGCTGTCTTGTAAATGCAACAAAGACAAATGTAAAGCTCCTACTGACT
GTAAAGGTAAGATCATTGTTTTCTTATTCCTTATCATTCACCGTCATTCT
TGGCGCTCCTTCAAAGTCTACGACCCTACGATCGACTCACTTGTCCAAGA
AATTTCAGCTTAAAGGTTTTGTTTTTACATAAGTATTCCCGTTTCATATC
AGACACATATTTCATATCAGGAAAGTGTCTTGCTTTTGTTATATTATGCT
GATATAAGCAAAAAGAATGTTTTTCTTTTCCTCTTTCTGACCAATCTTGC
TCCACGTCCGTGTCAATCCAATGTGAAAAACAAAACCTTTAAATGGTCCT
ATTGCAGAAAGGTCGAGAAATAACTGCACAATTTTAGGGTATGCTTGCTG
TAAGGACTTAATAAAATAAAACTACGGAAAGTATTTTTTATAACAGAAAA
TTGAGAATAGAATACTTACATCTTATGTGCATAACGGCCGGAGACCGGGG
AGTAAAAGTGACATGAATAAAAGCTAACAGTCATTTACACGTTTTTTTTT
TTATAAGAACGTCGAAAATTTTTGAAGCCTTCCGATGTTCTAAACTTTTT
GAGTTTTAAGCCTAAAAATGTTCTTAAAATTTTCTTATTTTCACCATTTT
GTGAGTATTTTTGTGCAATTTCCTAAAAAATTGGGTGTTTTCGAGTCCAC
AAAGCCTTAAAATGTTCTTAACATGTTCTTAATATTTCGGCCATCGAAGC
CTTATGTTCTTATATACTTTGTTCTTATAAAAAAAAAAACGTGTAATCTG
ACAGGTTCAATTTCCTATTCGCTGATTCTCATGTTTATCGAAGGTTCGAA
GGTTGAACGATGAGAGATAATTGGGATCACATAGGTTTTTTTTTTATATT
TTCAGAAATGAATACATACGCGCCTGCAAAGTGTAATCATTAAACGTAAC
TTCTACCTAGGAAGAACAACTTTCCACATAACTTTTTACAAAGCATAATT
TGTGCGCTTGCTTCGAACATCATCAAGCCATGTTAGTTATTATCTTGAGC
CGATCTTTAATATATCAGCTATAGTCTAAATCTGCCTGCTGAACTTTGCT
TTTTAATAAATTTTGATAACGCCGAGTTCAATGAAGTACTCTCGGGTACC
TAATAGCTGGGGGGGGGTTGGAATAAGCGGGGGGGTTGGAAAAAATTTCA
AAACTTAATAAGCGGGGGGGTTGGAATAAAAATGTCCTGGGTGGAAAATT
TTTGAAAAGGAGGCTAATACAGCTGAATTAGGACAAAAAAAATGAAATTT
TAAAAACATTTTCCCAAAAATTAATAAGCGGGGGGGTTGGAATAAGAATG
TCCTGGGTGGAAAATTTTCGAAAAATTAATTAGCGGGGGGACGGCTATTA
AGTACCCGAGAGTAATCGAGTCATCCGGTCTATCAGAAAGCCTTAAGTAA
CCTCTAGGCTAACATCATCCTCAACCAGAGTGATTCGTCCCTGGGTACGA
GACTGACCAAGTCAAATACATTTCTATTTTCTCATATCATTTTATTATAT
CAAACTTTAAAGTATTCGTCTTCGGTATCAGCCTCCATTAACATGCATTC
CTTTATTTCTAATCTTTGAAGAGGGGAGAGAAAAATTATCCTCTAACACT
CTGAAAAGAAACATTATACATATTACATTATTTAGGAAGAAAAGACACTT
TTTATTCTGCTACTGGTAGTTTCACGCCATTTTGGGAACAATCTTCAGGC
AACAGTAGCAGGCCAGTAGCAGAATAAAAAGTGTCTTTTCTTCCTGACTG
ACATAGCTCTGCTTATGTATTGAGCACTGTAAAAAAATGAAGAAATACTA
TCTTACATTAATAATTTTTGATGCTAATTTATTTTTATTTGAATCTTTTG
ACTCGATAGCGGTATTCACATCGAGTTTAAAGCCCAAAGAGCTAGAGTAG
AATCTCTAACCTTTCCCAGTCAAGAAAAAGTGAAGCCACTTATTTCCCAT
CCAGAACGCGCCTAGAACGCGCCGCAAAGCCGCAATCATGAAGACGGATT
GTATCTAGTGATTACATTGTTTTTGAGGACTGCATTTTCTGAAATCTAGC
GATAGATTTTAGTTTCAATCCGGTGTTTGTGTGAAAACCACGCACGGGCG
TTCTGGATGAGAAATAAGTGGTTTCATTTCCCATCCAGGAGTCTCGAGTC
TAGCCCTTCGGGCTTGGAAGTCAATGGGCATTCAGTTTAAAAGCCCGAAG
GGGCTAGAGATGAAATGGTTTCCTTTTTCGGTTGGAAACGAAGTCACTTA
ATTCCAAACCGAAATGTGTGACATATGTACGTGGTTTTCAGACAAGCGCT
TTTTATAAAGATTAAAAAAAAATTATCACTAAATTTTGGGAAATAGGGCA
TGTGGAAAGTTAGCAAGAAAGCCAGATTCAACTCGTCATTCCAAAAGTGG
CGCAATTCTTATGGCTTCACTAATCAGTAATCAGTGTTTATTTCATAAAA
GTTAATCAATCAATCAACCCAACAATGAATTTGAGACTGAAAAATTGAAT
ATCGCAATCAAGCAAATTTAAACTAAATCAATGTGTCTCTCAGATAAACA
GCATCTTTAAAGCATAGATATACTGCCGATATAAATAAACAGGAATCTTT
ATAAACTCACGGACGCCAACTGGGTACCATTAATTGATAAACTTAATCTA
AATATCTTACTCTTTCCTCCCATAGGAGAAACTGTAATGGATCAGTGTGG
ATGTTGTCAAGTTTGTGGAGGTACAGAAGGGGAAGCTTGTGGAGGGCCAT
GGCTACTAAAGAGATGTGTCAAAGGTTTGATGTGCTCCTACAAGGCCGAA
AACAGGGAAGTCAAGTTGGACGAAGTCGGAGTTTGCAGTAAGTTGATTTT
CCTTTTGGTTCTTAATTTTTTTTTTAGAAGAATTTACATAATTACAACTG
AGGTTTGAAACATTTATCCAGGAATTTACTTTTAAAAAGACTTACTGAAA
CCACCCTGGAGGTTTGCATTTTGTAGCCAATTTTACTCACGGTATGATAG
AGAAAGGCATTTTGACAAAAAATAAATGCACATCATCATAAACAAATTTT
GAGATCCTGTATCAAAATGTTAATACGCAATATCCCCTCTTTTTAGCGCC
ACTTCCAAGACGTGATAGAGCAGCACACCGTTGGGTAATGAAAGGCAAGA
AATTCTTAAAAGCAGTGTTGAAGAGTAAACGTCTTGTCAAAAGATTTTTC
TTTGCTTCAAAGAAACGCTCATAA Coding sequence (CDS) from alignment at sc0000566_pilon:85212..88535- >XLOC_040056 ID=XLOC_040056|Name=XLOC_040056|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=792bp|location=Sequence derived from alignment at sc0000566_pilon:85212..88535- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAATAATGAAATTAATTATTTTGTTGTCGATCGTTTCATTGGCTTA
TACGCTGTCTTGTAAATGCAACAAAGACAAATGTAAAGCTCCTACTGACT
GTAAAGATGGCAATAATGAAATTAATTATTTTGTTGTCGATCGTTTCATT
GGCTTATACGCTGTCTTGTAAATGCAACAAAGACAAATGTAAAGCTCCTA
CTGACTGTAAAGGAGAAACTGTAATGGATCAGTGTGGATGTTGTCAAGTT
TGTGGAGGTACAGAAGGGGAAGCTTGTGGAGGGCCATGGCTACTAAAGAG
ATGTGTCAAAGGTTTGATGTGCTCCTACAAGGCCGAAAACAGGGAAGTCA
AGTTGGACGAAGTCGGAGTTTGCAGAGAAACTGTAATGGATCAGTGTGGA
TGTTGTCAAGTTTGTGGAGGTACAGAAGGGGAAGCTTGTGGAGGGCCATG
GCTACTAAAGAGATGTGTCAAAGGTTTGATGTGCTCCTACAAGGCCGAAA
ACAGGGAAGTCAAGTTGGACGAAGTCGGAGTTTGCACGCCACTTCCAAGA
CGTGATAGAGCAGCACACCGTTGGGTAATGAAAGGCAAGAAATTCTTAAA
AGCAGTGTTGAAGAGTAAACGTCTTGTCAAAAGATTTTTCTTTGCTTCAA
AGAAACGCTCATAACGCCACTTCCAAGACGTGATAGAGCAGCACACCGTT
GGGTAATGAAAGGCAAGAAATTCTTAAAAGCAGTGTTGAAGAGTAAACGT
CTTGTCAAAAGATTTTTCTTTGCTTCAAAGAAACGCTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000566_pilon | genome | sc0000566_pilon:85212..88535 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 271-396:127 |
| Aaloc | 109-267:548 |
| Aaloc | 1-105:3325 |
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