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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:23995..26364- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040053 ID=XLOC_040053|Name=XLOC_040053|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2370bp|location=Sequence derived from alignment at sc0000117_pilon:23995..26364- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACACTCAAACACCTCACCAAGAAGGGCAGCTGAAATGTGATTTCTG
TGATAGAACTCTTGGAAGCAAAAGTGGAAAAACGAATCACATGAAAAAAT
GCCCAAACAGAATTGATTCAACACAGCCACACGACCCGAACAATATCACC
ACTGCACCACCAACAACACCAACACAAACCTCAGCATCCTCAGCCTCTGA
CGAACCACCTGCCCCAAACCCAAACAGTATACCCTTCAAATGGGGAGAAA
GATCATCTATCGATACTACAGCCAGCATCAATATGGCCTACGAACAAATT
GTCTACTGGCGGAGAAATCTATTCCTTGTTCCATCAGGCAGTGCCGGAAA
GAAATTTGTATCTGAAACAGCTAGACTTATAAATGCTTTCGTTGACTCTT
CTGCGATGAAAACAATATCTCTCAAGGCATTGATGATAATGCCAGCACTA
TTACTTCAAAAGCCATCAGCAAAGTCAAAAGCAAAGGACCACACTGCTGC
TTTAAAAAGACGCCTTGATCTATGGGAGAAAGGGGACTTCGAGGAACTAA
TCCGTGAAGGTGAGACAATCCAAAGACACCTCAAGTCTAAACAGACCGCA
AAATCGATCGAAGACATCTCTAAGGAATTTATCAACAAAATGTCTAAGGG
AAATATTAACGGAGCAATCAAGCTCCTTACGAACAATATGCAGAATGGAG
TTCTCCCACTCACTGACGAAACACTCAATCTTCTGTACCAAAAACATCCG
GAACCCCAAGAAGCCCACGTTGACGCATTACTCCCTCGACTCCCTGGCAT
TCACGAGTTGATTCACTCTGTACGCTACGAGGACATTACTCCCGACTTGA
TTAGAAGGTCTGCGATGCGAACCAACGGAGGAGCAGGCCCCTCAGGACTC
GATGGTGACGGATGGAGAAGGATCATCACCTCCAACAGCTTTGGAACCGC
CTCAACTGATCTCTGCACCTCGATCGCCAACCTTGCAAAAATGGTATGCA
CCGAGATTCATTCCCCTACATCCCTTGAACCCCTAATGGCCTCCCGTCTA
ATACCCTTGGACAAAAACCCAGGCCTCCGCCCAATCGGGATAGGCGAGGT
GCTGAGAAGGATCATCGGAAAATCTATAGTTAGTATTCTCAAAGAGGACA
TTAAACGATCGATTGGATCCCTCCAGGTCTGCGCCGGGCAAGACGCAGGA
TGCGAAGCAGCCGTTCACGCTATGCGTACACTATTTGAGGAAGATGAATC
CGAAGCAGTTCTATTAATTGATGCTGCGAACGCCTTCAATGCCGTGAACC
GAAACGTCTTTCTTCACAACGTAATAATCATCTGTCCACCTCTTTCGACA
TTCGTACAAAACTGCTACCAATCACCAGCCCGTCTTTTTGTTTTCGGGGG
AAAGGAACTAAAATCTACTGAAGGAACTACACAGGGAGACCCAATTGCAA
TGTTTGTATATGCTATAGCAACTATTCCCCTAATCGTGCGTTATGTTCTC
CGTGAGGAACCGTCTGATGAGAAAGCAAGAACAGCCGGATATGCTGATGA
TTTATTCGGTGCCGGGACAATTTGGGAACTAAAACAGCTTTGGCTGTACA
TTCGAGATGAAGGCCCTAAATTCGGCTATTACCAGCAAGAGGAAAAAACC
TGGCTAATAGTCAAACCAGAATTTTTATCTGAGGCGATGGAGATTTTTAG
CGATACACAAGTAAAAATTACAACAGATGGCCGAAAACACTTGGGAGCAG
CAGTCGGCAGCCTAGAATACAGGGACGAATTTATCAACGAAAAAATTGAC
GATTGGGTGAGTGAACTGAGTACGCTCGCAAAGATTGCCAAATTTGCCCC
ACAAGAGGCGTATACGTGCTTTACGGCAGGCTATAAACATAAGTTCAATT
ATTGTATGCGGACGATCCCTGATGTTTCAGCGTACTTTAATAGGATCGAC
AACGTCATTTCAACTGAGCTTATACCCGCTATCACCGGTGGAATTGTACC
CTCAGAAATTGAGCGCAAACTTTTCTCTCTCCCGCCAAGCAAAGGAGGAC
TTGGAATCCCAATATTCAGTGAACAAGCAAATTTTGAGTTCGCCAATTCG
TGCTTAGTTACCGAGGCACTTCAAAACGATATTACAAATCAAAACACTGC
GGCCAGCGACGAGAACGAAGCACAAATCAAAACGGCAAAGTCTATCATTC
GAGAACGTAAAAAGAGCAGAATAAATGAACTTTTGAACACAATAAAATCA
TCAGACGAAATGTCAAAGGCGAAACTTAGGTTGCTCAATCTGAACAGTGA
ATGTGGCGCGTCATTATGGCTTACCACCCTTCCCATCAAGGACGAGGGGT
ATCAACTGGACAAACAATCA Coding sequence (CDS) from alignment at sc0000117_pilon:23995..26364- >XLOC_040053 ID=XLOC_040053|Name=XLOC_040053|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4740bp|location=Sequence derived from alignment at sc0000117_pilon:23995..26364- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACACTCAAACACCTCACCAAGAAGGGCAGCTGAAATGTGATTTCTG
TGATAGAACTCTTGGAAGCAAAAGTGGAAAAACGAATCACATGAAAAAAT
GCCCAAACAGAATTGATTCAACACAGCCACACGACCCGAACAATATCACC
ACTGCACCACCAACAACACCAACACAAACCTCAGCATCCTCAGCCTCTGA
CGAACCACCTGCCCCAAACCCAAACAGTATACCCTTCAAATGGGGAGAAA
GATCATCTATCGATACTACAGCCAGCATCAATATGGCCTACGAACAAATT
GTCTACTGGCGGAGAAATCTATTCCTTGTTCCATCAGGCAGTGCCGGAAA
GAAATTTGTATCTGAAACAGCTAGACTTATAAATGCTTTCGTTGACTCTT
CTGCGATGAAAACAATATCTCTCAAGGCATTGATGATAATGCCAGCACTA
TTACTTCAAAAGCCATCAGCAAAGTCAAAAGCAAAGGACCACACTGCTGC
TTTAAAAAGACGCCTTGATCTATGGGAGAAAGGGGACTTCGAGGAACTAA
TCCGTGAAGGTGAGACAATCCAAAGACACCTCAAGTCTAAACAGACCGCA
AAATCGATCGAAGACATCTCTAAGGAATTTATCAACAAAATGTCTAAGGG
AAATATTAACGGAGCAATCAAGCTCCTTACGAACAATATGCAGAATGGAG
TTCTCCCACTCACTGACGAAACACTCAATCTTCTGTACCAAAAACATCCG
GAACCCCAAGAAGCCCACGTTGACGCATTACTCCCTCGACTCCCTGGCAT
TCACGAGTTGATTCACTCTGTACGCTACGAGGACATTACTCCCGACTTGA
TTAGAAGGTCTGCGATGCGAACCAACGGAGGAGCAGGCCCCTCAGGACTC
GATGGTGACGGATGGAGAAGGATCATCACCTCCAACAGCTTTGGAACCGC
CTCAACTGATCTCTGCACCTCGATCGCCAACCTTGCAAAAATGGTATGCA
CCGAGATTCATTCCCCTACATCCCTTGAACCCCTAATGGCCTCCCGTCTA
ATACCCTTGGACAAAAACCCAGGCCTCCGCCCAATCGGGATAGGCGAGGT
GCTGAGAAGGATCATCGGAAAATCTATAGTTAGTATTCTCAAAGAGGACA
TTAAACGATCGATTGGATCCCTCCAGGTCTGCGCCGGGCAAGACGCAGGA
TGCGAAGCAGCCGTTCACGCTATGCGTACACTATTTGAGGAAGATGAATC
CGAAGCAGTTCTATTAATTGATGCTGCGAACGCCTTCAATGCCGTGAACC
GAAACGTCTTTCTTCACAACGTAATAATCATCTGTCCACCTCTTTCGACA
TTCGTACAAAACTGCTACCAATCACCAGCCCGTCTTTTTGTTTTCGGGGG
AAAGGAACTAAAATCTACTGAAGGAACTACACAGGGAGACCCAATTGCAA
TGTTTGTATATGCTATAGCAACTATTCCCCTAATCGTGCGTTATGTTCTC
CGTGAGGAACCGTCTGATGAGAAAGCAAGAACAGCCGGATATGCTGATGA
TTTATTCGGTGCCGGGACAATTTGGGAACTAAAACAGCTTTGGCTGTACA
TTCGAGATGAAGGCCCTAAATTCGGCTATTACCAGCAAGAGGAAAAAACC
TGGCTAATAGTCAAACCAGAATTTTTATCTGAGGCGATGGAGATTTTTAG
CGATACACAAGTAAAAATTACAACAGATGGCCGAAAACACTTGGGAGCAG
CAGTCGGCAGCCTAGAATACAGGGACGAATTTATCAACGAAAAAATTGAC
GATTGGGTGAGTGAACTGAGTACGCTCGCAAAGATTGCCAAATTTGCCCC
ACAAGAGGCGTATACGTGCTTTACGGCAGGCTATAAACATAAGTTCAATT
ATTGTATGCGGACGATCCCTGATGTTTCAGCGTACTTTAATAGGATCGAC
AACGTCATTTCAACTGAGCTTATACCCGCTATCACCGGTGGAATTGTACC
CTCAGAAATTGAGCGCAAACTTTTCTCTCTCCCGCCAAGCAAAGGAGGAC
TTGGAATCCCAATATTCAGTGAACAAGCAAATTTTGAGTTCGCCAATTCG
TGCTTAGTTACCGAGGCACTTCAAAACGATATTACAAATCAAAACACTGC
GGCCAGCGACGAGAACGAAGCACAAATCAAAACGGCAAAGTCTATCATTC
GAGAACGTAAAAAGAGCAGAATAAATGAACTTTTGAACACAATAAAATCA
TCAGACGAAATGTCAAAGGCGAAACTTAGGTTGCTCAATCTGAACAGTGA
ATGTGGCGCGTCATTATGGCTTACCACCCTTCCCATCAAGGACGAGGGGT
ATCAACTGGACAAACAATCAATGAACACTCAAACACCTCACCAAGAAGGG
CAGCTGAAATGTGATTTCTGTGATAGAACTCTTGGAAGCAAAAGTGGAAA
AACGAATCACATGAAAAAATGCCCAAACAGAATTGATTCAACACAGCCAC
ACGACCCGAACAATATCACCACTGCACCACCAACAACACCAACACAAACC
TCAGCATCCTCAGCCTCTGACGAACCACCTGCCCCAAACCCAAACAGTAT
ACCCTTCAAATGGGGAGAAAGATCATCTATCGATACTACAGCCAGCATCA
ATATGGCCTACGAACAAATTGTCTACTGGCGGAGAAATCTATTCCTTGTT
CCATCAGGCAGTGCCGGAAAGAAATTTGTATCTGAAACAGCTAGACTTAT
AAATGCTTTCGTTGACTCTTCTGCGATGAAAACAATATCTCTCAAGGCAT
TGATGATAATGCCAGCACTATTACTTCAAAAGCCATCAGCAAAGTCAAAA
GCAAAGGACCACACTGCTGCTTTAAAAAGACGCCTTGATCTATGGGAGAA
AGGGGACTTCGAGGAACTAATCCGTGAAGGTGAGACAATCCAAAGACACC
TCAAGTCTAAACAGACCGCAAAATCGATCGAAGACATCTCTAAGGAATTT
ATCAACAAAATGTCTAAGGGAAATATTAACGGAGCAATCAAGCTCCTTAC
GAACAATATGCAGAATGGAGTTCTCCCACTCACTGACGAAACACTCAATC
TTCTGTACCAAAAACATCCGGAACCCCAAGAAGCCCACGTTGACGCATTA
CTCCCTCGACTCCCTGGCATTCACGAGTTGATTCACTCTGTACGCTACGA
GGACATTACTCCCGACTTGATTAGAAGGTCTGCGATGCGAACCAACGGAG
GAGCAGGCCCCTCAGGACTCGATGGTGACGGATGGAGAAGGATCATCACC
TCCAACAGCTTTGGAACCGCCTCAACTGATCTCTGCACCTCGATCGCCAA
CCTTGCAAAAATGGTATGCACCGAGATTCATTCCCCTACATCCCTTGAAC
CCCTAATGGCCTCCCGTCTAATACCCTTGGACAAAAACCCAGGCCTCCGC
CCAATCGGGATAGGCGAGGTGCTGAGAAGGATCATCGGAAAATCTATAGT
TAGTATTCTCAAAGAGGACATTAAACGATCGATTGGATCCCTCCAGGTCT
GCGCCGGGCAAGACGCAGGATGCGAAGCAGCCGTTCACGCTATGCGTACA
CTATTTGAGGAAGATGAATCCGAAGCAGTTCTATTAATTGATGCTGCGAA
CGCCTTCAATGCCGTGAACCGAAACGTCTTTCTTCACAACGTAATAATCA
TCTGTCCACCTCTTTCGACATTCGTACAAAACTGCTACCAATCACCAGCC
CGTCTTTTTGTTTTCGGGGGAAAGGAACTAAAATCTACTGAAGGAACTAC
ACAGGGAGACCCAATTGCAATGTTTGTATATGCTATAGCAACTATTCCCC
TAATCGTGCGTTATGTTCTCCGTGAGGAACCGTCTGATGAGAAAGCAAGA
ACAGCCGGATATGCTGATGATTTATTCGGTGCCGGGACAATTTGGGAACT
AAAACAGCTTTGGCTGTACATTCGAGATGAAGGCCCTAAATTCGGCTATT
ACCAGCAAGAGGAAAAAACCTGGCTAATAGTCAAACCAGAATTTTTATCT
GAGGCGATGGAGATTTTTAGCGATACACAAGTAAAAATTACAACAGATGG
CCGAAAACACTTGGGAGCAGCAGTCGGCAGCCTAGAATACAGGGACGAAT
TTATCAACGAAAAAATTGACGATTGGGTGAGTGAACTGAGTACGCTCGCA
AAGATTGCCAAATTTGCCCCACAAGAGGCGTATACGTGCTTTACGGCAGG
CTATAAACATAAGTTCAATTATTGTATGCGGACGATCCCTGATGTTTCAG
CGTACTTTAATAGGATCGACAACGTCATTTCAACTGAGCTTATACCCGCT
ATCACCGGTGGAATTGTACCCTCAGAAATTGAGCGCAAACTTTTCTCTCT
CCCGCCAAGCAAAGGAGGACTTGGAATCCCAATATTCAGTGAACAAGCAA
ATTTTGAGTTCGCCAATTCGTGCTTAGTTACCGAGGCACTTCAAAACGAT
ATTACAAATCAAAACACTGCGGCCAGCGACGAGAACGAAGCACAAATCAA
AACGGCAAAGTCTATCATTCGAGAACGTAAAAAGAGCAGAATAAATGAAC
TTTTGAACACAATAAAATCATCAGACGAAATGTCAAAGGCGAAACTTAGG
TTGCTCAATCTGAACAGTGAATGTGGCGCGTCATTATGGCTTACCACCCT
TCCCATCAAGGACGAGGGGTATCAACTGGACAAACAATCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:23995..26364 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2370:2371 |
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