|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000290_pilon:134897..137143+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040049 ID=XLOC_040049|Name=XLOC_040049|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2247bp|location=Sequence derived from alignment at sc0000290_pilon:134897..137143+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGCGCTTGGCTTTTATATTTAGTAGCTGTTGGATTGTAGCTTGCTG
TGAGTCTCTAAACTTACTGTAGCTAGGTAAAACTTTATAACAAAATCGGC
CTAAAaagataatcaaataaacaaatcctcactgcaaaattttatgctaa
ttttccccactgaattttctgattggaaaacaatggaaaatcaatctcca
tcgagtttcaaTCAGTTATTTTTACCCCAAACAGGTGAAAAATTCTACCG
GgcctgtgagaagagggtgttcAAATAACTCAAAATAACCTGTATTCAGC
GGGATCGATCCTAAAAACTTGTGAAAATGTGGTCTTTCCCTTCCTTTCAA
AGATGCATGCAGTGATACAGACGAAGATTGTGGACGATTCAAAGATTTGT
GCGGCGTGAACAGTTACGTCGACAAACACTGTGTCAAATCATGCGAGAGG
TGTGGTGGAGAGGGTGGAgccaccacaacaacaacaacagcttCTCCTGG
CAACGGAAATAGTGCCACTACAAGCACAGCAACAACACATCCCATGGCAA
CAAAAGGTCAGTTCGTCATTCAGAAGCTCAGATATGGCGAGACAGAAAAC
TATCACCTGTATTTTTgcaaaagccttaaaatctcAATAATAAAATGATA
CTTTTATAAACTTATCAGTCTGCTTTTCGATATTATTCTCCCTCGATTTA
GTTCCATGTGTCGACAATGATCCAGATTGTCCAGGATTGGTAGACTTGTG
TGGAATAAACAGCTATGTAGACAAATACTGTTTGAAGACGTGTCCTGAAG
CGTGTAAGAAGTTGAACAATGGAGATGGCGATGGTGGTGAAAGTCAAGGA
AATAAAAATGCGAAATGTGGAGTTTCAAAGGTAATGAGAGGAGGTTAGAA
AGTCGCTTTTAATTCAAATCAAGCCTCAAAAATACGAGAAAAATATCACT
CTCCCATCTAAAGGGATGTGGCGAATGTGACAATCTAGCCTAGTCAGATT
AgacaaaacaattaaaatacgTGCTATGTGCGGAGTAATCAGAGTCTGCT
CGGAAATCACGAGATGATACATGAATATTTCATTATTCCATTGATCGATG
ATGtttttttCCAGGTATCGCAACCTCGAGTAGTTAACGGTGTTGAAGCA
CAGCCAGGTGCTTGGCCATGGATCATTTCCTTACAAACAGTTCGAGGATC
ACATTTTTGTGGCGGGAGTATATTGACACCAACATGGGTAAGAATTTCTT
AGTACTTTTATTCAATTTATCTCCAAGCCCGTCAGATCTGTAAGCCGGAA
TAACCATACCGATCCAGACATTCGACATTCTGGCACAATAGTACATTTGG
CAAGAAACAAAGTGAAAGATTTCTTTAAGAAGACATTGTCCAGGTTCCAT
TGGAacgttgaaaaatatttacagatttcttttttgataactGATCTTGA
TCCATATTAAGGCAAATTATGTGTGAAAAAAGATGGCACCATTTTCCCTT
TGGATGTGAATATGTTTGAAGATTTCGTGCCCAGAAGGTTTTTGACATTA
AACACTCTCTATAATTCAAAACCTAGGAAAGAGCCTCAAATTTATTTCAC
ATGactttctttttaaagattttgacagcCAGTCATTGTGTGAAGAAATA
CAAAGATATACCTGGTTTCTTTATGATCGTGGCAGGTGCTCACGATAAAG
AATTGAGTGAACACTCTCAACAGAGAATCGAAGGTATCTGAAAGCAGATA
GTTTAAGGATTGTGTTCACAGCTCTGTAAAGAGTTTCTAAGCAGAAATTT
TTACACACTTTGACAACATCACCACGTTTAATCTAAACTTGTGAGAACAA
AATAATCTGATGAATCAGCATATCTGATAAATGCCTTTCCTATGCTAATA
CAGTCAACATTTCTCTAATTcgtctattattcgaatctttccatGATAGA
gtttaaacaaaaatatattaGTAGTTGGCAACCTCCATAATTCAAATGTT
CCTATAATTACCGAATCAGAGAATCGAGTAAAAGTTATCAATACATTAGC
CCACTACAATTCATCCGAAAATGTCCCAAAACGCTTTCTTTTTAGCCAAG
AGAATCATTGTTCACCCAGAATATGGGCGTTACGATGAATTCAGTGCTGA
TATCGCTTTAATACAACTGGAAACTCCTCTCAGATTGAACGACCGTGTTG
TTAAAGCTTGTATGCCACAACAAGGCGTTTACCCAAAAGTTGGATAG Coding sequence (CDS) from alignment at sc0000290_pilon:134897..137143+ >XLOC_040049 ID=XLOC_040049|Name=XLOC_040049|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1644bp|location=Sequence derived from alignment at sc0000290_pilon:134897..137143+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGCGCTTGGCTTTTATATTTAGTAGCTGTTGGATTGTAGCTTGCTA
TGCTGCGCTTGGCTTTTATATTTAGTAGCTGTTGGATTGTAGCTTGCTAT
GCATGCAGTGATACAGACGAAGATTGTGGACGATTCAAAGATTTGTGCGG
CGTGAACAGTTACGTCGACAAACACTGTGTCAAATCATGCGAGAGGTGTG
GTGGAGAGGGTGGAgccaccacaacaacaacaacagcttCTCCTGGCAAC
GGAAATAGTGCCACTACAAGCACAGCAACAACACATCCCATGGCAACAAA
AGATGCATGCAGTGATACAGACGAAGATTGTGGACGATTCAAAGATTTGT
GCGGCGTGAACAGTTACGTCGACAAACACTGTGTCAAATCATGCGAGAGG
TGTGGTGGAGAGGGTGGAgccaccacaacaacaacaacagcttCTCCTGG
CAACGGAAATAGTGCCACTACAAGCACAGCAACAACACATCCCATGGCAA
CAAAAGTTCCATGTGTCGACAATGATCCAGATTGTCCAGGATTGGTAGAC
TTGTGTGGAATAAACAGCTATGTAGACAAATACTGTTTGAAGACGTGTCC
TGAAGCGTGTAAGAAGTTGAACAATGGAGATGGCGATGGTGGTGAAAGTC
AAGGAAATAAAAATGCGAAATGTGGAGTTTCAAAGTTCCATGTGTCGACA
ATGATCCAGATTGTCCAGGATTGGTAGACTTGTGTGGAATAAACAGCTAT
GTAGACAAATACTGTTTGAAGACGTGTCCTGAAGCGTGTAAGAAGTTGAA
CAATGGAGATGGCGATGGTGGTGAAAGTCAAGGAAATAAAAATGCGAAAT
GTGGAGTTTCAAAGGTATCGCAACCTCGAGTAGTTAACGGTGTTGAAGCA
CAGCCAGGTGCTTGGCCATGGATCATTTCCTTACAAACAGTTCGAGGATC
ACATTTTTGTGGCGGGAGTATATTGACACCAACATGGGTATCGCAACCTC
GAGTAGTTAACGGTGTTGAAGCACAGCCAGGTGCTTGGCCATGGATCATT
TCCTTACAAACAGTTCGAGGATCACATTTTTGTGGCGGGAGTATATTGAC
ACCAACATGGattttgacagcCAGTCATTGTGTGAAGAAATACAAAGATA
TACCTGGTTTCTTTATGATCGTGGCAGGTGCTCACGATAAAGAATTGAGT
GAACACTCTCAACAGAGAATCGAAGattttgacagcCAGTCATTGTGTGA
AGAAATACAAAGATATACCTGGTTTCTTTATGATCGTGGCAGGTGCTCAC
GATAAAGAATTGAGTGAACACTCTCAACAGAGAATCGAAGCCAAGAGAAT
CATTGTTCACCCAGAATATGGGCGTTACGATGAATTCAGTGCTGATATCG
CTTTAATACAACTGGAAACTCCTCTCAGATTGAACGACCGTGTTGTTAAA
GCTTGTATGCCACAACAAGGCGTTTACCCAAAAGTTGGATAGCCAAGAGA
ATCATTGTTCACCCAGAATATGGGCGTTACGATGAATTCAGTGCTGATAT
CGCTTTAATACAACTGGAAACTCCTCTCAGATTGAACGACCGTGTTGTTA
AAGCTTGTATGCCACAACAAGGCGTTTACCCAAAAGTTGGATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000290_pilon | genome | sc0000290_pilon:134897..137143 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 673-822:2098 |
| Aaloc | 556-669:1619 |
| Aaloc | 433-555:1115 |
| Aaloc | 256-432:704 |
| Aaloc | 52-252:355 |
| Aaloc | 1-48:1 |
|
