XLOC_040040 (mRNA) -

Overview
NameXLOC_040040
Unique NameXLOC_040040
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000130_pilon:529052..542136+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040040 ID=XLOC_040040|Name=XLOC_040040|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=13085bp|location=Sequence derived from alignment at sc0000130_pilon:529052..542136+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcaaatttcaattaTAAAGCAAGACGTGTGCAAAAACCTAGTTTGAA TATTGCTTCAAAAAGTGATACCAGTTTTGGTCCCTCTCTATCAGGTATTT GAGTGTATATACTCTAATGTTTTTTATCTTGAAACAAGTCAAACTTTTAT CCTacacacacaccacacCATTTTTCCTGAATTTCTCTTTCTCACCCTTG ATGTGTTTCTTTTCCTATGTTTTCTGTTCTTTATTCTCTAGATtatttag cctggatatccaagctcgaaattttagaaaaaacaaaatttacctcaata tacaaagttctaaaattatagagcttggtctccccaGAAAATGAAAGtac aaacccatgtttccaaaactttcctagccaacccagggcagcaaaacaga aattaataaaaagcaaccttgcaagatctaaaaccatttaaaacatccaa agattataccaaagtccataaacaagtttgcatgcattatcatgaccaac catgttttcttggaaaatgaacttgcctccgttttcttctttttcatgtt ttcgtaTGTAACAAAAAGTTCTATCTTCGCTAGCAAGTAGAGGGTAAccc tatttttgtttcagaattgCTCCGCTACATGTAGATCGGTCCTGAGAATG Caaaacgctctagggagaccaggctgtaaaccagaacataaaatatcaaa aactagactgtgaaatagtttacagcctggatattcAGTCTtagattttg gccaaaatttgagTCAGGTGTTcttatagatagatagatatgccctccga tacatcggaatgggtcctacccacagtggagtaggaatcacagcgcaagc agacattgcaaccctgcagatgcgagctgccgagccatggtgtataccac gacactcgaactacacgggagaacggatgtcctcgcaggtgtagaacctc ccGAGTGTCacggcacaccacaatgtctgaaatatctacccatactcttg tatcagagttatggtacccaattcccctcacatggcatgggttgacccgg gcgaaggatgattcacttgccaagtgaatcgtagtgccacggtgggtatc gaactcgagtctcctggacagaagtcaagcacgataaccactacaccact acgcctgtatattcttataaaaaattttataattgtGTATTGCTTTTCTG TTGAGAATACTATGAAATCACTTACGCAAACACATTTCTAATAGTAAAAC ATTCAGAATTAATTTATAAAGGTTAGTATTCTAATTGACTGTCActcttt tttttaccttttgttTTAGCACTGAATGACGCATGGTCTTCTATTGCAGC TACAAAGAAAGAGGTTGGTATTTTTAACATCCATCAATTCTTCATTCTGG AGTTTTAATATTTAGAAGATAGACATTCTAATTTAAGAtttgaaaatgac tttttgaTTGATAGttaaaaggttttttaattcacttttcgaaaagtgaa aagttaaaaaaaaaaacacaataaaaaataatctacaaattaatctataa tttctaaattcaaaagcTCCAAGGCCCCTACAACTTTATTTTTTAGActt aagaagaaaaattaccctACTGTAATTTTTTCCTGGGTAATAATGGTATA TAATCAATATTATAACACATGGCAATGCACTTCTTATCATATTATATCAT TCCTTTTAAAATTATAGATTAATCAAGTAAACCATAGAATAAGGCAAGTA TCAAGCCCTATTGATTTTTACCATGATGATGAGGCAGATGAACGCTTACC GCCACCTCCACCCAAGAATAAGAACAATCCAAACATTGAACGAAGGACTA TTTATCAAATGCTTGAACAGGTGACAACTCAAATTCTGCTATTGAAACAA TATTCTCCTTTCCAAGCGCCTTTTAATGTTTATAATGTAAGAATTTCACT AGAAATTGACTACTGATACTCGGCAAACAGtcactctaaaggccatggct ctgtaagagaatctgcccTGATTGGCTCActgatttgatatttttcatca aagtttggAATGAATTTTAAATGAGCTTTAATTAATCACAATGATTGGCT AAAATGCAACACTCGCACCAAAATCTAGTACCAATTAAAGCAAACTTTAG AACCAAGTtgctttcatttttgttttgactgaacAAGCAGGTCAGATTAT CCCTTTAGAACGGATTGTGATATGCACAGAATGGATAGTCTGTTATAAGA TTAGACATGTTTCTATCTTCTCTAGACCAAAACACGCAAAGAAAACATTC CTCCTCCAAGCTATCCACAACCAAACCTCCATAGAATTCCACCAAGCGTG GGTGAGTTGCACTTTAGAGATATTGTTGTGAAAAAGGCTGGTTGCTCTCA AGATACTTCCTAGCTTTCGAAATCTCACTTCTAGCAATCTTGTTGTTTTC TCTTATACTCTTGTTTCCATTGCACTCTTTTCACTTGTTTTTTACCCTCT GTTTAGATGAAATAAACACATACAATATACATGATGAACATCCACAACGC AATACATCACTGCGATCATTGTCCAAACGAGAAAGAAAAAGTGGTAAAAG TAGAactagtttttttataaagtattAAAATGCTTACAAGCTTGTATAAC ATTGTTAATGTAATGCCTCAATTTGCTTTTTGTCTATGATCACttttttt ACAATATCTAGAGGCTCTCAAACGACTGAAAGAGAAGATTCAACagcaaa aaattaattcaagcaCGTCAACTGTTGAAGAGGGTATGTTTTAACAAGga acaaattaaaagttttaaattcaTTTAAGTCTTCATAACAAAAGTGCGAG TCTTTCTGAAAGAAATCCTGCAATAAAGTAGCCTTGTGAATTCAGATTGA ACTAGGAAGGCAAAAACGTATTTATGGGAATGAGATTTTTGTCCATCTTA GATTGACATTGTCCAACATGAATTACATTCAGATGTATTCAAAGTGACTT TGAGTGTAACAGTGTGTAGCATCAATATTGCATTCTATTTCGTAACTTGA TATAATTTTTTGGTACCTTTTAGCTTTTCCATATAAAACTCATCACAATG AGATTGACATTGTCCAACATGAATTACATTCAGATGTATTCAAAGTGACT TTGAGTGTAGCAGTGTGTAGCATCAATATTGCATTCTATTTCGTAACTTG ATATAATTTTTTGGTACCTTTTAGCTTTTCCATATAAAACTCATCACAAT GAGAATGATATTGTGCAGCATGAAGATGAACGAATTCCACAACAAGCAGC CATGACACGGAAAGTTGCTCATGCACCTACTGCTCCCACTTATACTGGta tgcttttttaaaaaaattctgtttctGGCTCAAATTATGGGGAATATAGA TTTAAAAGAGGCTAAGTTAAACTGCTTCTTTCTGATTAATACTTTTAAGA TCTCTCTAAGCTTAAGGCTCCACAACAAAGTATCATGGCTTTATATTGTA GAATTTTATTTGACAAtgatcgtgttcaaaaataaaggcctgttttgtga cattttcaaagtgGCTGATAattatgttaataaaatgagtatttttggtg gctaacagtttattttttcaccaaggatAAGTAGAATGATTAACCTTTCC AATTGTTTTGGAGCGAAATTAAGTGGCTTACTGggttacaagatatttca agataagctATGAGTCGTTTATGTGGCTGACAACACTGGTGGCCTACAAA ACCAACCAGTCTCAGAATGTTGCtcttttatctgttttgagataatatga tacctctagttacggattcaagtgtcattttcaaacaaaccatttcctcc tttgaggtggctgacaaaacacttatttggacatatttggacctggagcc acacattttactcattttagcatttttttcatcaaaataagtttttttgt gtaaataccgatcataatataaaatttcaacgttaggcgaaacaaaaaaa atttcttgattccggaaaccggccgggtgaaaaaaattttttttctgacc cggccgcaaactttcgttcgttagtagtccgtacttgttgtaatttaggg cataatttatgctgtgtttatacataaaagttattcttaaactctatttc aatgagccataaattatcaaaaatagcaaaaaaaaattattttccggcca cccgcattccggaaacaaaacattttttatcattcgccttatatttgaaa tatttcccaaggtattcaagaaatactatatttttttaaatttttgagtt cactaaatgtcacactatttttgaacatgatCCAATTCATTTCTTTTTAG GCTTTAATTTACAACCAGATGCAACTTTTGTCAAATCGACAGTCAAAGTT TCCCCACAAATGAAGAGGAAATCGAAAGCaaaaaaaGCTTCACTTGACCa agcaaaaactaataaacgtATTGCCCATGacagaaaaaaagcaaaaggtA ATAATAATATGGTGTATCTGTAACATGCTTTTATATTTTAATAACAGAAT TTTACTCCTAACTTTTCCCAATCAAAGGGCAGtagaaataaatctttttt tgaaagtattatAAGAAATTTGCTCTCGAAAATTGCAAGCCCATTAATTC AGCATTaaaaaaaCCTTTCCTGTCACCTTTTGCTAGACATTATAAACAGT TTTCTTAATATATTCGAGCGGGATTCTTATTTGTGATTGTAATTGCTTAT AATCCAAATTGAActttagaaatttgtttttgtttagtttCAAAGAACCA ACGAGTAGTTGCAACAAAGAAATCTACCACAAACAATATCATTACAACTT CTTCATGGAGGGTGGGGCAACAAATCCAAcggaaatataaaaaagaaatg acCATGcacaaagaagagaaaagtgAATGCAAAAGTGATTTGGCTACCAC CACCAAAACTAACCAAACATCAGACCTCAAAAGTGATAAAGGTATCAAGT AATTGATAAAAAGAGGTTTTCGAGATCCAAACTTTCAGACATAGTGGCTC GAGTGCTAAAATCATGACAAGTGGGTTTCTTAACCCATCACTTTCATAAC TTAAAAtgtttaattcttttttatttcaaatgtgCATGCATGCACACCCA AACTAGAAATTGTTTTATTTACTGGAGCAAGGTAAAAAACAAGGCACCAC AGTTCCTGGCACTCCTTCCTCCAGATATAGTCACTATTTTAGGCTAAAAA TGAAGAACCACTTGGGGCTACAGTAGCACTAATAGCAATCTTATctcgtt ttcttttgttttagagaaCAATAATTCAACTGATAGTCATTCCaaaaaaa CAAGCTCAAACCTTCACTCAGAACTTGATAAAGATTTAATATCGGAAAAA GCAGATGAGAAAATATTCCCTGACCATTCAAAATCACCAGTTAGCGAAGA ACAGAAAAGTGATACAGACTCACTAAGAGGTTTGGAACAACTTCAAGATG ATGTGCTGACAAAAACAGCCAAAGATGTGATGGCAGAACTGCAACACAAA GATGAAACTTCACCAGTTTGTAAGAGACTaatctttcaattttcatgTAT CATTGTGCCTATCAATtgtctcttttgaaaatatactGGAAGATCTCACG TATTTACTTATAAAGTAGACATTCCATTCCATATTCACATATTATCGTAA CTAAAAGCATGTATCTTGATATGATGAAGTGATGTCTATATTTTTAGTTC ATTAATGGCATTTTACTTTGTAATTGAGAATGTTTCTTAAGTATTGTTTC TTAGTGACACACAACACTTGTAACTAAGAACGTCTTTTAAGTTCATATTC TGTAAAGAGGTTTTAAACACAAATTTGCACCATTAGTAATGCCTTATTTT TATACAGCAAAGAGGAAGAAATTGGCAAAAGCAGTAGTTGATACTGGTCA AAAATCACAAGCAACAAAGAAATCACCTTCAGTCAAACGGAAGCTTGGTA ATAGTCTTTATGTACTATTTTATCGACTTTGTTTTAAATCTAAATCTATA CTCCTTTGAAATCGTggaaaaatttcattcattattATTTTGCAACTTTA TATTCAGACGAAGTATTATATCCTACCAAAAAGGAAAGACATTATGATCC AAGTGAAGTTAAGgtatttgttttgtgtttttattattttcaaattttac gaaTCTATATTAAGATAACAAAACTAGTTTTGTCTACTTCAAATACTTAT TTCCTTCATATTTAGTTTGAAACATGTTGACTGTCAATATTCTTCAAATT CCTTTAGatttaaagatttcaaattttcttggcTGAGAGACCCTTTTTTA CTTGTTATTAACTTTTTATCTTGACCCTCCAATCAGAAATACATGATTAA GCAGCAAGCTgaacgtaaacgacgaagaatcgaagaacaggcaaaacaaa gaaaacaaaaagaagaacaggaactgaaactacaggttaacaacTACCTG CTTTAAACTTTGGGGGTGTTACTGCTTTGTTGTTCTACACACCTAGTAGG TTATTCGAGAGATAGTCTGTGCCCTCCCCTATGTTGAGAAGGTCTGAGGT CCAGGGTGGTCTGTGGTCTGTTGTGtagtctggaaaataaaaaatccagg gggtccaGtttttttAGTGTAATATATAATCCAGCAGGATGCTCTCTTTT TCAGGTCACTGTTTCCGTGCGAAAAAAGTAAATTGTGTCAGAAATTTTAC TTTGGTGTCCTGCGGGCCCTAGGCGCTTGAGAAAGCGCGAATTTTCCATT TGGACCTAGGTGGAAGgatgataatgatgatgaaTAATCCAGGacggtca gtaaaatgaggtggaaaatccagggtggtacAAAATCAAGGTGTCCCCTT cccaaattttttctggaatagcccaatgtaTAACTTCAAAGCAGATGGCA GACTAATGGCaatttttgagttaaaaaaggaatttcctgTTGTAAATTTG GCAGCAGTATAGAGTGCcattttaaaatgacaaaactTAGAGCGGTGTAC GCTTTTATTTTTTGCAGTGTTCAAACTTTTTCCGTCTCCGACGGATTTCC GTCTTAGTGAAGTAAATAAAGAGGaatttccgtctcaaaattctgtataa ttctccgaaatttcaagaatatgtgctaatttGCCGTGAAAATCcgtttt ccgtctcagacgaaaaaccttGGTTTGACCACTGTTTTTGTTATGAAGAA agatatttaaagatttttaagttttgatctaaaattATAGGAGCTGTACA AAAAGCAAAAGGCAGCAGTGAAAGGAAGCAATGCACCTGCGAAACGATCA AATGTTGGCTATAGCACTTTTATCAAGGATGATTTCGCAAAAAAGGTATT TTATCTTTTGTTTGAAGCTATTTTCCATGCTAGAGCCATCCTCCTTGACT ATGTGTTGACTGTGCAATGGAAAAGTAGGGAAATAATTTAAGGgattaat atttaaaaaatattttaatttataaCTTAACTTTTGTTATTCTATATAGC TCTCAGCAAAGACAAAGTTTAATGGTAAGACATATAAATTTTGTTCCATC CAACACGTTTCTAAATTATTATGGCGCTACGTgggggggggATACCCTTT TATAGGGACATCAACTACTGTTTTAAACTAAACCCATACAGCACATTTAA CGACAGatacgaaacgaaacgaaattttgattaaaaaagtagCTGACATC AAAGCTTTATCACGAAGAAGCCTTACTCTAGTAATATTTACTTCCCTTTA GTTAAAAACCCatctcattttgatttttcctaGAAATGATGAAAGGCTTT GATTATCCAGGGGAGGCAGAAATGGATCATATTCCTGAAAAAGGTGAGtc atatcatgtcttacaacaAATTCTGTCTAGTAACCATCATACTTCTCCGA TAATATTCCAACACAATCATGTGGTTGTTCGGCAACTCTACAGGCAACTT AAAAACTGTTATCGAAAATTTCGTTACTTCCTTATAGCCCGTCTTTACTT GAATAATCGTCTATTAttaaataagaatattttctttcaactaTCAAAAG CATttgtaaaattataaaaattttttccaaatggCATTCGACGGACTATA CCTGTACTGCATTTCATATTGTCATTTAATGGCTTTCATTCGTTTTATTT TAGATATGAATGATATATTTTCCACAACGATTAGTGGCACGACCTCGTCA AGACCACTGGCAGATACTGAAACTGAATTTGATGACATTGCCACTTATAA CGATCACGAAAATGATGTCCATTTCTCCATCGAACAAGCAAACAATGATC GGTTGCTATCACCACCTGCTAAAGATAAGAAAAGTAATACTTCTTTgaca gttttttgaaagttttttttcttcctgattACTTTGGTAATACAATTATG CTGGCAGGGAGAGACGTATATTCGCGAGTGGGTTATATTCACGCTGCTCC AGATTCTTCAATGGATGAAATGGATCAAACTCCTGTTTGATGTGTGGAGT TAATGTATAAATTTATTAACCTTTGCGATTATGAttaaaattatttattg ttttcaattttagcgACCATGTCACCGTCCAAAGCAGATCGTATAGCAGC TATCAGACAAACGGCTACTGCTTTGCGTGAACGCCTTATGGAAGAATCAA AGAGGTTGACTGGTTTAGtacaaaacaaacaaagcaCAACCTCGATGGGT GCGAcaagagaaaaaataaagaGTCCTGAACCGTCAGCATCAACATTACA GAGAGTAACAATCCCTCGTAAAGAAGAGATGACATACGCTTCGCATTTCC CAGGTACGTTTCAGTACTTCCCTTTTgtctaaaataattaaaattactCA GTACAGTAGCTTACTTGCAGGAGACGTGTTGCACCATCGAATTACAAAGA GCGCCACATGAAACCCCTGATTTGCTGATTTCGGCGCCCTTTGCTTTTTG CAACCTATGATGATTACCACTTTTTCAGTCAAAAAGAGTTAAAATTATCT AGTAATGCTCGTGCTCACTTTACTTGCGTTATTGCTCCattgaaaatgct tttaaaatagGGGTGTTAAAATCTGGGGTTCTACCTCCTCAGTTTACCCG AATTTGGTTGACCTATAAGCTATTAAAATGACTTGCGTATTACTTAGTAT TTTATTGCTTTGAAATAAACAAGATGCATGCCAACATTCCTTTACATTAT AAAGGGCTTATTTCCCCTCAGGAGTATTGTTGCATTTATTCCCTTTCCTC AATTTTATGTAGACCAATCGAGAAACAATCAAGAAGTTTTTATtgtgatt tttcttttaatttcagGTGTTGAAAATTTGGACTCGCAAGCTAAATTAAA CAACAAAATAGTAAATattcttctttttaaaatttaattgagATTTGTCC TTTTTTGCAATTTAATTCCAATTGAATCCCACGCTAGAGCCCTTAGAATT TGAGCTCTCGGCTAAAAGCTAAGCTTCAATCTTTAAAATAGTAGTGTGCA AGATATCAGAGTTAAAGAGTGATTTTCAGTTGTTCTTTGCAAAGCCTCTA CACCAACCAAAAACATTACAATGCCCAGCAGTACTTTAATTTGATTTGTT ACTAtttttttCAACCAAGGATGAAATGGAGACAGCAGCGCGAAAAATAC AAGCAGCTTACCGCGGCTTCAACGTCCGACAAGGTTTACACTCGTGGGAA CTTCCGTCCGGCCGAACCCTGCATCAAACCATGGAAGAAGCCAGACGCCG TGCTTTTATACGCGACCTCAAAATGGAGCCGCAGGTCCAGTTAGCAAGTG CTCTTTATGAAAAGGTTCGAATTCCTAGTAAGATTCCTGAGAGACGCTCA AAATCGCCGGACAGTAAGTCAGCATTCAGTTCACACCGCTCAAGATCGAA GTCTCCTGACAGTAAAGTTACCGACCGATCGGCGTACACTTCATCTTTCC AACCAAGCTTTCCGCCCCGATCACCAGATAGCAAACCGTCAGATCGATCT TTGCGACAAACTTCAACGAATCGTAGCCGAGGTGTAAAATCGCCGCATAA AGATGAACAATCGTTGCAGAGTCTTATCAGCGAAGCACTGGAATCTTCAA AAGTTTCCCTTGATGACGCTGAAAACACATTATCGTCCATTTCTAAAAAG ACACACTCCAGGGTAAAAATTATTATCATGCTGTCATCATGGACAAACCC GTTTCCCAAATactattttttaaagaagtcgttcaaaaatgttttaatat tttatttttaatgagctTACTGAAGTGAAAGGCTTTATGACGATTGAAAT TATCAATTTGATATTGATTTTAAGTATCAAGTTTTGTACTCTAACGTAGT GGATACTTCTCTCCTTTCTTCCAGCCTGTACCGTCGCAAAAGTCATCCCC TACATACAAAGAAGGTATGAAATCCTTCCCCAATTACAATTTTGACATCT ACATGATGTAAACAAGAGGGCTCGGGTTGTTATCATagatcattattttc aaaatgataaagTCCATAGAGAGACAAAGAGTCAGtcgttatttttcaaa tttcttgtcATACTTACTTGGTTGATGATGGAAGGAATGAAATGATTGAG TTTTAGTTTTGccttcaagtaaaaaaaaaatattagactGTAGTTCTTAA CCAACGTTTATTCAAAGCATCAAACTTAGGccacaaaatattcaaaatgt tgaGAGATACATAAAGGACCATAATGCCTTGAAAgaatacaaatattttt tatttctttttttcttcaacttgCAGACAGTGAACACGATCAATCTCCAA AAGAAGAGGACGACCACAGGGAACGCTTACGAAAAATTATGGAAAAGTAT AAAGATGTGCCTGAGGATaggtaaagtttttttttgggaaGGAATAATGG ATAAGAACTGGTCCATATATAAACTTTACCGAAGAACTTTGACTCCTATA GGATTTGGAAGCACCGAGAAATTGATCGATTGATAAGTGATATGATAATT TTCAACAATCACCATGGGCAAAAATGAATATAGGTTTGCGTCAAATGATT GATGGAGAGAGAAAGTTTTATATTCTTGAAAGTTTTAAGTTCAATTATTT CACTTCCTTTTCTAGATATTCGGTGATAAACATTTTCGCCAGGAATTATC CAGGATTACGTCAGCAGCAATTATCTGAAGAAAGACACTCCACACTCCCT CCTTCTGGTAAACATAATGTCTATTTTCATTATCTAGacatttattttaa aaaccttaagAGTTAAATTATGGACCTGCTAGCAGTATTCACAGTGGACA GCTctaggcttttaggccttacgcTCGAAACAAAGGAATGTATGACGTAG GCTTTTGacccagaaaatgaaaaaactttgagtttcttttttatTCGCCA TTTTCTGTAACTATCAGGAGTGAATCTTGTCTCTTGATTTCAATTACTGA TTCCTCAAAAGGTTTATGGAAAAGAGATTGAATATTACCCTGAGGTTGGT GCAATTCTTAAacttaacctttaccacgccttctctctgggaacttcacc ccggtctttttgggaaaaatgacagttttacgctttccgtcataacgttt gatctactaaaccgattcaaaaaaataagcccattctggaaagcccaact atcctgctttccaaaaatgttaaaataaaggatttttctctatcaatggt gacacagtagtcttctgccttagagttgaaaaaaattcaagacgcaattt gtcatatttttcaaaattttaagttccggttaaaaaaaaagtggggagaa catttgcgataccataattttctggctcattgtttccaccattataacta caactgctagccaaaaaatcacaatcatacctttactagaaaaggcagaa ttcatttttagaaaaccctggttttcgagaaaatttccacgtaaatcaga ggtacgtaaggcagaggccccttgaggtaatttttatgggaaatatcact aaaaacagctaaaaatgactttcttatcatcaaccagcatgaaagcaata gaaataacatagtacatacactttgaaactctttgcagccttatcagaag ccttaacttgggtttcggtgacggtcgatgacggtcctcacccttaatgt accgtcatactaaagaataaggaggcagaaacttacctcaaacactgact aaactacaaacaagcaatacataacatttacaatcaataaaacaaaccat tttccactaaataaacataaaaagttagttacagcagtcaatgagctcat aatttcccaaagaatattttgcctgattttccagtttgttttgacagtta aaatcgaaagtaggtggtttcaaactattgaaaatagtttgtttacattt tctctccgtcatataagacatttcccgggATTTAAAGGCGTCTGTAAGGC GGTAGGGCGGCTTTTCTTAAAACTGCacgaaaaacgtatatttacggctt cggcgtggtaaaggttaaaaCTCCTCATATATATCTTCTCCTTCTTTAGA TCTGACACCAAACAGTACAGAAACTGAAGAATTGATAGCAGATGCCAAGA AACATGAGGACAAAACACACCAAGAAGATGATGAGGTGACCAGAGTTGAT GGTGAAGACAGTCTCCATGCTTTGTCTGAACAAACATTGACGGGTAGTAA TTTCAGTGATGGCGATAATAGTTTGGAAGGTGCGACGCTCACAACCAGCC ATAACAAACCAACTTCGTTGAATGTAGTGGATAAAACCGACacggtaatt tttttctttagactttttttAAGCTTGAAACGAGTTTATGTCTCATCCAG AGTTATATCAAATACGATTTTTCTCGGTTGTTGGAGTTTCATCATACCAC TCAAACGAGATGATATCGTTAAGCTTTAACAAGATTTGGCCATTAAACCA GCTGATATTTAACCACAAAATTCCCTTTCTTTTCTTGTTCTAGCCTTCAT TAAAACATCAAAGTCAATCCAAGACCCCATCATAT

Coding sequence (CDS) from alignment at sc0000130_pilon:529052..542136+

>XLOC_040040 ID=XLOC_040040|Name=XLOC_040040|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6420bp|location=Sequence derived from alignment at sc0000130_pilon:529052..542136+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtcaaatttcaattaTAAAGCAAGACGTGTGCAAAAACCTAGTTTGAA
TATTGCTTCAAAAAGTGATACCAGTTTTGGTCCCTCTCTATCAGatgtca
aatttcaattaTAAAGCAAGACGTGTGCAAAAACCTAGTTTGAATATTGC
TTCAAAAAGTGATACCAGTTTTGGTCCCTCTCTATCAGCACTGAATGACG
CATGGTCTTCTATTGCAGCTACAAAGAAAGAGCACTGAATGACGCATGGT
CTTCTATTGCAGCTACAAAGAAAGAGATTAATCAAGTAAACCATAGAATA
AGGCAAGTATCAAGCCCTATTGATTTTTACCATGATGATGAGGCAGATGA
ACGCTTACCGCCACCTCCACCCAAGAATAAGAACAATCCAAACATTGAAC
GAAGGACTATTTATCAAATGCTTGAACAGATTAATCAAGTAAACCATAGA
ATAAGGCAAGTATCAAGCCCTATTGATTTTTACCATGATGATGAGGCAGA
TGAACGCTTACCGCCACCTCCACCCAAGAATAAGAACAATCCAAACATTG
AACGAAGGACTATTTATCAAATGCTTGAACAGACCAAAACACGCAAAGAA
AACATTCCTCCTCCAAGCTATCCACAACCAAACCTCCATAGAATTCCACC
AAGCGTGGACCAAAACACGCAAAGAAAACATTCCTCCTCCAAGCTATCCA
CAACCAAACCTCCATAGAATTCCACCAAGCGTGGATGAAATAAACACATA
CAATATACATGATGAACATCCACAACGCAATACATCACTGCGATCATTGT
CCAAACGAGAAAGAAAAAGTGATGAAATAAACACATACAATATACATGAT
GAACATCCACAACGCAATACATCACTGCGATCATTGTCCAAACGAGAAAG
AAAAAGTGAGGCTCTCAAACGACTGAAAGAGAAGATTCAACagcaaaaaa
ttaattcaagcaCGTCAACTGTTGAAGAGGAGGCTCTCAAACGACTGAAA
GAGAAGATTCAACagcaaaaaattaattcaagcaCGTCAACTGTTGAAGA
GGCTTTTCCATATAAAACTCATCACAATGAGAATGATATTGTGCAGCATG
AAGATGAACGAATTCCACAACAAGCAGCCATGACACGGAAAGTTGCTCAT
GCACCTACTGCTCCCACTTATACTGCTTTTCCATATAAAACTCATCACAA
TGAGAATGATATTGTGCAGCATGAAGATGAACGAATTCCACAACAAGCAG
CCATGACACGGAAAGTTGCTCATGCACCTACTGCTCCCACTTATACTGGC
TTTAATTTACAACCAGATGCAACTTTTGTCAAATCGACAGTCAAAGTTTC
CCCACAAATGAAGAGGAAATCGAAAGCaaaaaaaGCTTCACTTGACCaag
caaaaactaataaacgtATTGCCCATGacagaaaaaaagcaaaagGCTTT
AATTTACAACCAGATGCAACTTTTGTCAAATCGACAGTCAAAGTTTCCCC
ACAAATGAAGAGGAAATCGAAAGCaaaaaaaGCTTCACTTGACCaagcaa
aaactaataaacgtATTGCCCATGacagaaaaaaagcaaaagtttCAAAG
AACCAACGAGTAGTTGCAACAAAGAAATCTACCACAAACAATATCATTAC
AACTTCTTCATGGAGGGTGGGGCAACAAATCCAAcggaaatataaaaaag
aaatgacCATGcacaaagaagagaaaagtgAATGCAAAAGTGATTTGGCT
ACCACCACCAAAACTAACCAAACATCAGACCTCAAAAGTGATAAAGtttC
AAAGAACCAACGAGTAGTTGCAACAAAGAAATCTACCACAAACAATATCA
TTACAACTTCTTCATGGAGGGTGGGGCAACAAATCCAAcggaaatataaa
aaagaaatgacCATGcacaaagaagagaaaagtgAATGCAAAAGTGATTT
GGCTACCACCACCAAAACTAACCAAACATCAGACCTCAAAAGTGATAAAG
agaaCAATAATTCAACTGATAGTCATTCCaaaaaaaCAAGCTCAAACCTT
CACTCAGAACTTGATAAAGATTTAATATCGGAAAAAGCAGATGAGAAAAT
ATTCCCTGACCATTCAAAATCACCAGTTAGCGAAGAACAGAAAAGTGATA
CAGACTCACTAAGAGGTTTGGAACAACTTCAAGATGATGTGCTGACAAAA
ACAGCCAAAGATGTGATGGCAGAACTGCAACACAAAGATGAAACTTCACC
AGTTTagaaCAATAATTCAACTGATAGTCATTCCaaaaaaaCAAGCTCAA
ACCTTCACTCAGAACTTGATAAAGATTTAATATCGGAAAAAGCAGATGAG
AAAATATTCCCTGACCATTCAAAATCACCAGTTAGCGAAGAACAGAAAAG
TGATACAGACTCACTAAGAGGTTTGGAACAACTTCAAGATGATGTGCTGA
CAAAAACAGCCAAAGATGTGATGGCAGAACTGCAACACAAAGATGAAACT
TCACCAGTTTCAAAGAGGAAGAAATTGGCAAAAGCAGTAGTTGATACTGG
TCAAAAATCACAAGCAACAAAGAAATCACCTTCAGTCAAACGGAAGCTTG
CAAAGAGGAAGAAATTGGCAAAAGCAGTAGTTGATACTGGTCAAAAATCA
CAAGCAACAAAGAAATCACCTTCAGTCAAACGGAAGCTTGACGAAGTATT
ATATCCTACCAAAAAGGAAAGACATTATGATCCAAGTGAAGTTAAGACGA
AGTATTATATCCTACCAAAAAGGAAAGACATTATGATCCAAGTGAAGTTA
AGAAATACATGATTAAGCAGCAAGCTgaacgtaaacgacgaagaatcgaa
gaacaggcaaaacaaagaaaacaaaaagaagaacaggaactgaaactaca
gAAATACATGATTAAGCAGCAAGCTgaacgtaaacgacgaagaatcgaag
aacaggcaaaacaaagaaaacaaaaagaagaacaggaactgaaactacag
GAGCTGTACAAAAAGCAAAAGGCAGCAGTGAAAGGAAGCAATGCACCTGC
GAAACGATCAAATGTTGGCTATAGCACTTTTATCAAGGATGATTTCGCAA
AAAAGGAGCTGTACAAAAAGCAAAAGGCAGCAGTGAAAGGAAGCAATGCA
CCTGCGAAACGATCAAATGTTGGCTATAGCACTTTTATCAAGGATGATTT
CGCAAAAAAGCTCTCAGCAAAGACAAAGTTTAATGCTCTCAGCAAAGACA
AAGTTTAATGAAATGATGAAAGGCTTTGATTATCCAGGGGAGGCAGAAAT
GGATCATATTCCTGAAAAAGAAATGATGAAAGGCTTTGATTATCCAGGGG
AGGCAGAAATGGATCATATTCCTGAAAAAGATATGAATGATATATTTTCC
ACAACGATTAGTGGCACGACCTCGTCAAGACCACTGGCAGATACTGAAAC
TGAATTTGATGACATTGCCACTTATAACGATCACGAAAATGATGTCCATT
TCTCCATCGAACAAGCAAACAATGATCGGTTGCTATCACCACCTGCTAAA
GATAAGAAAAATATGAATGATATATTTTCCACAACGATTAGTGGCACGAC
CTCGTCAAGACCACTGGCAGATACTGAAACTGAATTTGATGACATTGCCA
CTTATAACGATCACGAAAATGATGTCCATTTCTCCATCGAACAAGCAAAC
AATGATCGGTTGCTATCACCACCTGCTAAAGATAAGAAAAcgACCATGTC
ACCGTCCAAAGCAGATCGTATAGCAGCTATCAGACAAACGGCTACTGCTT
TGCGTGAACGCCTTATGGAAGAATCAAAGAGGTTGACTGGTTTAGtacaa
aacaaacaaagcaCAACCTCGATGGGTGCGAcaagagaaaaaataaagaG
TCCTGAACCGTCAGCATCAACATTACAGAGAGTAACAATCCCTCGTAAAG
AAGAGATGACATACGCTTCGCATTTCCCAGcgACCATGTCACCGTCCAAA
GCAGATCGTATAGCAGCTATCAGACAAACGGCTACTGCTTTGCGTGAACG
CCTTATGGAAGAATCAAAGAGGTTGACTGGTTTAGtacaaaacaaacaaa
gcaCAACCTCGATGGGTGCGAcaagagaaaaaataaagaGTCCTGAACCG
TCAGCATCAACATTACAGAGAGTAACAATCCCTCGTAAAGAAGAGATGAC
ATACGCTTCGCATTTCCCAGGTGTTGAAAATTTGGACTCGCAAGCTAAAT
TAAACAACAAAATAGTGTTGAAAATTTGGACTCGCAAGCTAAATTAAACA
ACAAAATAGATGAAATGGAGACAGCAGCGCGAAAAATACAAGCAGCTTAC
CGCGGCTTCAACGTCCGACAAGGTTTACACTCGTGGGAACTTCCGTCCGG
CCGAACCCTGCATCAAACCATGGAAGAAGCCAGACGCCGTGCTTTTATAC
GCGACCTCAAAATGGAGCCGCAGGTCCAGTTAGCAAGTGCTCTTTATGAA
AAGGTTCGAATTCCTAGTAAGATTCCTGAGAGACGCTCAAAATCGCCGGA
CAGTAAGTCAGCATTCAGTTCACACCGCTCAAGATCGAAGTCTCCTGACA
GTAAAGTTACCGACCGATCGGCGTACACTTCATCTTTCCAACCAAGCTTT
CCGCCCCGATCACCAGATAGCAAACCGTCAGATCGATCTTTGCGACAAAC
TTCAACGAATCGTAGCCGAGGTGTAAAATCGCCGCATAAAGATGAACAAT
CGTTGCAGAGTCTTATCAGCGAAGCACTGGAATCTTCAAAAGTTTCCCTT
GATGACGCTGAAAACACATTATCGTCCATTTCTAAAAAGACACACTCCAG
GGATGAAATGGAGACAGCAGCGCGAAAAATACAAGCAGCTTACCGCGGCT
TCAACGTCCGACAAGGTTTACACTCGTGGGAACTTCCGTCCGGCCGAACC
CTGCATCAAACCATGGAAGAAGCCAGACGCCGTGCTTTTATACGCGACCT
CAAAATGGAGCCGCAGGTCCAGTTAGCAAGTGCTCTTTATGAAAAGGTTC
GAATTCCTAGTAAGATTCCTGAGAGACGCTCAAAATCGCCGGACAGTAAG
TCAGCATTCAGTTCACACCGCTCAAGATCGAAGTCTCCTGACAGTAAAGT
TACCGACCGATCGGCGTACACTTCATCTTTCCAACCAAGCTTTCCGCCCC
GATCACCAGATAGCAAACCGTCAGATCGATCTTTGCGACAAACTTCAACG
AATCGTAGCCGAGGTGTAAAATCGCCGCATAAAGATGAACAATCGTTGCA
GAGTCTTATCAGCGAAGCACTGGAATCTTCAAAAGTTTCCCTTGATGACG
CTGAAAACACATTATCGTCCATTTCTAAAAAGACACACTCCAGGCCTGTA
CCGTCGCAAAAGTCATCCCCTACATACAAAGAAGCCTGTACCGTCGCAAA
AGTCATCCCCTACATACAAAGAAGACAGTGAACACGATCAATCTCCAAAA
GAAGAGGACGACCACAGGGAACGCTTACGAAAAATTATGGAAAAGTATAA
AGATGTGCCTGAGGATagACAGTGAACACGATCAATCTCCAAAAGAAGAG
GACGACCACAGGGAACGCTTACGAAAAATTATGGAAAAGTATAAAGATGT
GCCTGAGGATagATATTCGGTGATAAACATTTTCGCCAGGAATTATCCAG
GATTACGTCAGCAGCAATTATCTGAAGAAAGACACTCCACACTCCCTCCT
TCTGATATTCGGTGATAAACATTTTCGCCAGGAATTATCCAGGATTACGT
CAGCAGCAATTATCTGAAGAAAGACACTCCACACTCCCTCCTTCTGATCT
GACACCAAACAGTACAGAAACTGAAGAATTGATAGCAGATGCCAAGAAAC
ATGAGGACAAAACACACCAAGAAGATGATGAGGTGACCAGAGTTGATGGT
GAAGACAGTCTCCATGCTTTGTCTGAACAAACATTGACGGGTAGTAATTT
CAGTGATGGCGATAATAGTTTGGAAGGTGCGACGCTCACAACCAGCCATA
ACAAACCAACTTCGTTGAATGTAGTGGATAAAACCGACacgATCTGACAC
CAAACAGTACAGAAACTGAAGAATTGATAGCAGATGCCAAGAAACATGAG
GACAAAACACACCAAGAAGATGATGAGGTGACCAGAGTTGATGGTGAAGA
CAGTCTCCATGCTTTGTCTGAACAAACATTGACGGGTAGTAATTTCAGTG
ATGGCGATAATAGTTTGGAAGGTGCGACGCTCACAACCAGCCATAACAAA
CCAACTTCGTTGAATGTAGTGGATAAAACCGACacgCCTTCATTAAAACA
TCAAAGTCAATCCAAGACCCCATCATATCCTTCATTAAAACATCAAAGTC
AATCCAAGACCCCATCATAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040040XLOC_040040-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000130_pilongenomesc0000130_pilon:529052..542136 +
Properties
Property NameValue
Aaloc3169-3210:13044
Aaloc2926-3168:12602
Aaloc2833-2922:11167
Aaloc2740-2829:10829
Aaloc2698-2736:10425
Aaloc2155-2697:9670
Aaloc2113-2154:9369
Aaloc1873-2109:8616
Aaloc1693-1869:8206
Aaloc1633-1689:7836
Aaloc1606-1629:7550
Aaloc1501-1605:7291
Aaloc1402-1500:6387
Aaloc1348-1401:6110
Aaloc1258-1344:5910
Aaloc1003-1254:5317
Aaloc799-999:4790
Aaloc652-795:4353
Aaloc529-648:3227
Aaloc457-525:2714
Aaloc370-453:2509
Aaloc292-366:2276
Aaloc139-291:1718
Aaloc97-138:1322
Aaloc1-93:1