XLOC_040007 (mRNA) -

Overview
NameXLOC_040007
Unique NameXLOC_040007
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000204_pilon:179732..180568-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040007 ID=XLOC_040007|Name=XLOC_040007|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=837bp|location=Sequence derived from alignment at sc0000204_pilon:179732..180568- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAATTCAGATATGGCTGGTTTTCGCGTGTTCACAATCAATATGGC TTGTGCCGCTGATCCGAATCAAGAGAGCAACAAATCTCGAAGAAGCGCCA TTTCAGCATTAATTCATGAACAAGATCCAGATATTATTTTATTGCAAAAT GTCAACAGACGACGTGATGTTGAATTCATTGACTTCATGTTAGCCAAAGT GTGGCGACATTATAATTATTACATGAAACGAGTACGTAGCTCGACCGCCA TTATGGCAAAAGCTAATCTGTTTGCAGTTGATAAAGTGAAGTTTTCGGAT CTAAATATCATTGGTACAGCTGAGCAAAAAGATATGATTCAAAACCACCT TTCCTTAGTCCGGTTGACACATAAGGCGTCGAAAAATTTCATGTTTGTCG GCTCGTGGTCGTGTCCAGTGCACATCGGAATGACGGATGAGAAAAAGAAA CGGATCTCCAGTCTGTTAATTTCGATGATGCGTAGAGAAGCTGTCGGAGC ATTCTGGGTCATTGGAGGTGATTTTAATATAGCTTATGATCAAAGCAGTA TTCGAATGGCACAAAAAACGGGCGATGAATTCTTTAATTTGGTTGAAGAT ACAGGCCGCGTGGCGTGCTCGGAAGACAACTCTGATAACTATTTTGTGTT TTCAGGTAAGAGTGCTCATAGGCGTATGACTCTAAAGACAGTAGAAACAC CGAAATGCAACGTTGAGAAACAACAAAAAGCATTAAATTGCTACCCTCTG ATTGGTCTAGTTACGATCACGTGGGCAGCGGCAAGTCCTAGACACAGTCT CCCATCACCAACGCAACAACAGCAAATTTTCATGTAA

Coding sequence (CDS) from alignment at sc0000204_pilon:179732..180568-

>XLOC_040007 ID=XLOC_040007|Name=XLOC_040007|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1674bp|location=Sequence derived from alignment at sc0000204_pilon:179732..180568- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAATTCAGATATGGCTGGTTTTCGCGTGTTCACAATCAATATGGC
TTGTGCCGCTGATCCGAATCAAGAGAGCAACAAATCTCGAAGAAGCGCCA
TTTCAGCATTAATTCATGAACAAGATCCAGATATTATTTTATTGCAAAAT
GTCAACAGACGACGTGATGTTGAATTCATTGACTTCATGTTAGCCAAAGT
GTGGCGACATTATAATTATTACATGAAACGAGTACGTAGCTCGACCGCCA
TTATGGCAAAAGCTAATCTGTTTGCAGTTGATAAAGTGAAGTTTTCGGAT
CTAAATATCATTGGTACAGCTGAGCAAAAAGATATGATTCAAAACCACCT
TTCCTTAGTCCGGTTGACACATAAGGCGTCGAAAAATTTCATGTTTGTCG
GCTCGTGGTCGTGTCCAGTGCACATCGGAATGACGGATGAGAAAAAGAAA
CGGATCTCCAGTCTGTTAATTTCGATGATGCGTAGAGAAGCTGTCGGAGC
ATTCTGGGTCATTGGAGGTGATTTTAATATAGCTTATGATCAAAGCAGTA
TTCGAATGGCACAAAAAACGGGCGATGAATTCTTTAATTTGGTTGAAGAT
ACAGGCCGCGTGGCGTGCTCGGAAGACAACTCTGATAACTATTTTGTGTT
TTCAGGTAAGAGTGCTCATAGGCGTATGACTCTAAAGACAGTAGAAACAC
CGAAATGCAACGTTGAGAAACAACAAAAAGCATTAAATTGCTACCCTCTG
ATTGGTCTAGTTACGATCACGTGGGCAGCGGCAAGTCCTAGACACAGTCT
CCCATCACCAACGCAACAACAGCAAATTTTCATGTAAATGGCGAATTCAG
ATATGGCTGGTTTTCGCGTGTTCACAATCAATATGGCTTGTGCCGCTGAT
CCGAATCAAGAGAGCAACAAATCTCGAAGAAGCGCCATTTCAGCATTAAT
TCATGAACAAGATCCAGATATTATTTTATTGCAAAATGTCAACAGACGAC
GTGATGTTGAATTCATTGACTTCATGTTAGCCAAAGTGTGGCGACATTAT
AATTATTACATGAAACGAGTACGTAGCTCGACCGCCATTATGGCAAAAGC
TAATCTGTTTGCAGTTGATAAAGTGAAGTTTTCGGATCTAAATATCATTG
GTACAGCTGAGCAAAAAGATATGATTCAAAACCACCTTTCCTTAGTCCGG
TTGACACATAAGGCGTCGAAAAATTTCATGTTTGTCGGCTCGTGGTCGTG
TCCAGTGCACATCGGAATGACGGATGAGAAAAAGAAACGGATCTCCAGTC
TGTTAATTTCGATGATGCGTAGAGAAGCTGTCGGAGCATTCTGGGTCATT
GGAGGTGATTTTAATATAGCTTATGATCAAAGCAGTATTCGAATGGCACA
AAAAACGGGCGATGAATTCTTTAATTTGGTTGAAGATACAGGCCGCGTGG
CGTGCTCGGAAGACAACTCTGATAACTATTTTGTGTTTTCAGGTAAGAGT
GCTCATAGGCGTATGACTCTAAAGACAGTAGAAACACCGAAATGCAACGT
TGAGAAACAACAAAAAGCATTAAATTGCTACCCTCTGATTGGTCTAGTTA
CGATCACGTGGGCAGCGGCAAGTCCTAGACACAGTCTCCCATCACCAACG
CAACAACAGCAAATTTTCATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_040007XLOC_040007-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000204_pilongenomesc0000204_pilon:179732..180568 -
Properties
Property NameValue
Aaloc1-837:838