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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000204_pilon:101544..108955- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040001 ID=XLOC_040001|Name=XLOC_040001|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7412bp|location=Sequence derived from alignment at sc0000204_pilon:101544..108955- (Clytia hemisphaerica_ch_hm2_pilon)
CAAGAAACAGAATTCAAGATTCAAGCAGAAAATAGGTAACTTTTGTGCAG
AATTTATTGGATCTCTTTTAACACACATAAATGAAATATTCTTTTCCGTA
GATCAGATCCTTTTAATAAATACAAGCTTTTTTGGTACAATTTATATTGA
TTGATGTTTAAATCATCTTTGCCTACCAGCACCTTATGTACATGCAGTAT
ACCATGAACATATAAACGACTGGACATCCATCTCCTTTATCTTTTTGTAG
AAAAGGCTGCTAGCTTCGTTGTCGCCTCGTTAAAAGCACAAAATGAAACA
ATAGATTTTGATGATATACCACTTGGGAATACCTTGCTAACAACGTCAAA
ACTTCGACAAAAGTCTCTGTTGTTCTACTCTTCTCAAGTCTTTTATCTTT
ATCATAACAAAGATAACAGAGGCAAAACCATCGTCAGCTTGTCAAAACTC
AGACTAATATTTTTAAATTTTGACTTAAAAGTGTCTAATAAGTTTAGAGA
GTGTCACATTCTAATTTTGATATTCTTATTACACAGGCTCTCAACTTTGG
CAAGCTATTTTTTTCAAGTCATAAAAAAAATTATTGGAGTGACAAAAGAG
ATTCAAAAGTATACACGCAGTTGAAATTCTGCATTTCAGAGTTGAAAATG
TTGATAAAATATATTGCAAACTTGTAAAAAAATTCGAAAATAATTTTTTT
TGTACATTAGGAGTAATGTTCAAGATCTATCAATCTTTTTACCTAAGTAA
TTCAAAGAAATAAAATTATAACGGAATGTTGTCGGATTTTTCATATCAAT
TTTGAAATACAGGCGGCAACGAAGCTCGCTTCAAAGAAACAATAAAAGAT
AGATGTCCAGTCGTTTATATGTTCATGAGTATACCAAATTTGAGGGAACT
ATCTGACTGACATTTGTTTCAAATTAGCATTCCCGTTTCTATTTCTGTTC
TTTCTATCTATTTGTTAAGTAATATAAGATGTAAAACCCATACTGGACAC
GTGTAAAATTTAAGATAAATATTGTTGGTATTATGTACAAGTTTTGTTGA
AATAAGGGAAAAGTGGAGAGATACTTGGAGTAGGTATAGTACGGTCTAAT
TGTGTAAAAATTGTGCACAAAGGCGTGCAAGCATGAAATTTTGCACAATT
GTAGTTTAGGGGTCAAAAATGGATTTAAATCTCAGACCCAAAAAATTGGC
ACATGTTTGTGTATTTTACAGGCCAGAACAGGTTCCATGGCTAAATTGAA
TTTATTTTTCTCCAAAGTATATCATGTTACATACCGTTGGAAAGCATTTT
TCATGCTTGTTTAGAAAAACATTACAACCTATATCTGAAAATGAAGCCAA
AAAAAGTTATTGAGGAAGGCTTTTTAAAAATGAAGAAAAATGATGTAATT
GCTGACGTCGGCAAAAATTCAAGGACCATACCTGAAAAAGTTTATGTCTA
TCAAATTAAATAGAGGACCTTTCAATGTCTAAATGGATAGCTTTGATTGA
GAGTTAAACTTACTTGACATTGAATATCGCGTTTTTATGACCCTTCGAAA
AAAAATTCATTTTAGCCTGGGAACCTGTTCTGGTCTGTAAAATACACAAA
CAGGTGCCAATTTTTTGGATTGGATTGGATTTAAATCCATTTTTAACCCC
TAAACTACAATTGTGCAAAGTCTCGTGCTTGTACGCCTTTGTGCACAATG
TTATTGACTTTTGGCACATTTAGACTGCACTAGTAGTGTATCTTAATAAG
TGAAAATAATATGTAGTGGTTTAATTAGACAAAAGACAAGATAATAGTTA
GCAACTACACACCAGGATAGACTAGAGCAAGACTATAAAAAATATTAATA
ACTCATAATTAAGAGTATTGAGCAAACCTCAGAATGATGCAAAGAGATTT
AATTAATAGGAGATGCTAAGCACTGAAAGGATTAATGTTTTCTCACAAAT
ATTGTTTATTTTAGGACAAGATGTTATCCAATTAGGGACTAAGGGGTCCC
TCACACATTGATTTTTCCCACTAATAAAGTCTTCTATTGTTTATTAGGTG
GATTGGAAGTTTGTATACGATGACACCTGGCAATTCTACTACCAAACGTG
AATACAGAAAGCTGATTGGCTGGCTATCAGACTCAATCATCAAAGCGAAA
CTAGATGAAATGAAATTCTTTTTGGGAGTTCCAGGTTTGTAAAAATTTAT
TCCAAATTGATCAGATGAGATGGAGTTTTTATAAGATACTTCAATAATTG
GTCATTTGAAGTAATAAAGATGACGCGTTCTTTAGAAAAAGTAACAAAAT
TGTTTTATTAATGGTTAACGACCAACCAAATCAAATAAGAGCTTGTAAAA
ACCCCATCTTGTCCCAAATTGATGGACTTATAAATAAAGAGAGAGAAAAC
ATGAAAAATTTATTCCCATTCCAAAAAAAATAATTCTCTTGTTTATCCAG
TAAAGTTGGTAATTTTAGGTAAACATTTACTAATTGAACATGAATAAATT
TTGGTGTATTGAGCCTAATGTTTTTATTGAAAAGAGAAGTGTGGCTGCTG
AAATATTTTTAAATTTTAGCCGGAAGAAATGAGAAAAGATACACACCTTT
AAAAATTTTCCAATACATGAAAATCTAGTTAGCTGGTTTGCAAAGAAAAC
CTAGAAAATCTTTCTGTCATTTCTAGCTGGCAAAAATGAGAAAATTCAAA
CACCTTTGGAATTTTTCCAATACATGGAGGGAGAAGGGCAACTAGGACAA
AATAATTTCGATACCTTGATTGATATCATGGAAACTATTGGTCGTATTGA
CCTCGTGCAACGAATCAAAAAATTTCAAGAAATTTCAAAAGAAACTGAAG
GTATTTCTTATATATTACTTCTCTTGTAATGTGTCACTCAGTTAATGCAG
CCATTTAAGATGTACGCCCAATGAAGTATAGGCCCGAAGGGCTAGAAGTC
AATCTCCTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGG
CCTTGAGCGGCTCGCCTGGTTTTTACACAAATGACAGATTGAAACTAAAA
TTTACCGCTAAATTTCGAAAAAAATATCAATCGTAAACAAAGGAATTGCT
AGATTCAATCTGTCGTCAAAAATGCGGCGCATTTTTTAAGGCTTCACTTT
TTCTTGCCTGAGAAAGGTTAGAGATTGAAGTCTAGTCCTTCGGGCTTTAA
ACTCAATGTGTACGCCATCACTGTGTACCCATAAACTTGTGACAGTATGA
AGGTCTAAGAATATGTTTCGGACCTTTTTATGCAGAATTCTTTCAGACGG
TATAGATATCATTATTTTAGTGTACTTTTTTAGAAATTGTTTATTCATAT
TTATATTTGTTATATTTGTTATTCATTCATTCTCATTTTGATATTTTAGC
TCCCATCACTGTCGAGTTAGCACCGCAAACCTTCACATCTCCTCCAGGAA
ATCTATCTTTGAACCTGCAAAGCCTCAGTCCAGGTCATGATGATCAATCA
ATCCAAAGCATCAGTCCTGGAGCATCTGAAAGTATCGCCGAGGAAATGAT
ACGCCCCGAATTATCAGAAAAGGTGTTCACGCCACCGCCATTCCAACAAG
CTGAGGAATCCTGTGGATCTCAGAACAGACAGACGTTTGTATTAACGTCG
AATTATGAAAATAAGAGCGGCGGATCAATGAAACAAGACCATCCAAAAGA
AAGCAAAGATATTTTAAAAAGATATAAAATGGATTCGAACCCACGTGGTA
TATTCTTGATCATTAGTAACAGTGATTTTTCATTCGCTCTTGAGAAGAAT
GGTCTCACTATTAACGATAGAGACGGCACCATCAAAGATGTTGAACGTTT
AGATAAGACCTTCACTGGATTACAGTTTGATATTAAAAAGTATCATGATT
TAGATGCGGAAAGTATGGAAAAATGTTTAGAATATTTCGCCACTTTAGAT
CATACTTATTATGATTGTTTTGCATGTTGTATTATGACTCATGGTACTGA
ATCCACACTTGTTGGGACTGATGGTGATGAAATACAACTAACCAATGTTC
TCGGAAAATTTGAATCGGTTAAAAGTTTAATAGGTAAACCAAAACTATTC
TTCTTTCAAGCGTGTCGTGGAAAACCCGCTAAAAAACCTTATTTTACCAA
AGATTCTGCTCCTGGCGGTTATGGTGGAGCAAGTACTTGGGATGACAATA
TGTTTGGGAAACGTTACACTCCACCATTGGGATCAGATTATTTCATTGGT
TATGCAACACCACCGAGTAAGTTAATCACATTTCCTCGCATTTTAAATTT
GCTTGCCAAACATTTTTTCTCACAGACTAAATTGTGTCTCACAGACTAAA
TTGTGTTACATAGCCTCGGCTGTTTTTTGTTTGTATTTTTCTTTGCTTTG
TTTTGAAAAATCAGCTTTAGATGTTCTAAAGATAGTATTTACTTTCTCTT
TTCCAAGTACTTAAAAGGCGCTGAAAGGATGTTTCTTCCTCAGTAAATTC
AAGAATATGTGGTTTGATCGCCCAATAGTTCCCCTACTAATAGCCAATTT
TCAATTGTAAAAATATTCTCCTGTATAAAACGTGCAGTATTCCGTTCCGC
TCCGCTCCGAACCAAAATGAAGCCAATCATGGTTTCTAACCCCCCCTACA
TTTAGGGGTGGTCTTGGGTTTTGATGAACCAAAAGCAAGGGGGTGTTAAA
AGTATGACTTTCCTAAGGGGGGTTGTCAGTTAAGGGGGGGTCTTCTTACC
TAAGGGGGGTCTTCTTAGATAAGGGGGGTCTTCTTCGATAAGGGGGATCT
TCCTTGAATTATGCGAAATTTCAATTTTTGGACCTACCTCCGGGTGCCCC
GGTGGAGGTCCTATAAATTAACCCATGTTCGTTCGTTCGTTCGTTCGTTC
GTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTTCG
TTCGTTCGTTCGTTCGTTCGTTCGTCCGTCCGTCCGTCCGTCTGTTACCA
GCTTTTCTCGGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGA
TGCAAAATGGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAA
ATTTATTTGGGCAAATTTGGGCCAAAAACTACCTAAAAAAGGGTTTTTTG
GACTTTGTGCAAAATCCTGTCATTACTTTTTCCTGATTTTTTGTACAAAG
ATGGAAAGCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCCGGAAA
ATTCTTATTCGCCTTAAAAAACGGATTTTCATATTTTGGGGGAAATTCCC
TTTAACCAAATAAGAAAATATAGCTTTTAACAATGTTGATTCAAAATTTT
TTTTGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTGACG
AAGCAAGATTTTTAAGGAAAATTATTTTGTGCAAATTTGGGCCAAAAACA
GCTTAAAAGGTTTTTTGGGCCTGAATGGTTCAAGTGATTTTCGTATTTGG
GGAAATTCCTTTTTACCATTTTACATTATTCAACACACAAGCTTTATATT
TCCATTCTGAATTTTTGTACAATTTTTGTCACTTTTTTCTTATTTTCATC
TGATGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTTCATTTA
TACTGATTTTCTAAGGGGGGGGGTGAAATTTTAAATTAATTTCCTAAGGA
GGGGTTAGCACTTAAGGGGGGGGGGTCCTCTTATCACAGGAAAAAATTTT
CGATTTCCAAGGTTGGAAATTCAATATTTTTGGGTTGGAAATTCAATATT
TTTGGGTTGGAAATTTTTGTTTTATAATTGAAGATTGGAAATTTCAGCGA
TTACCTTAAGCTGATTTGGAAAACGTAAATTACCCATAGGTTTTGTAGAA
TAAACCAACGCCCTTAAAAAATCAAGTGAAAAAAACTCATGTAGAAATGA
CAATTTTCCAAGGCTAGTTGGAAAACATGACTTTTTGGGTGGGAAATTTG
TGTTTCTCCAAACAGTTTGGAAAACGTTAAAAATCCATGTGGAAATTACG
TTTTTGTAACCATTTTCTGCGCATGTCCTTTGAGAAAACCACAAGTGATT
TTTCGCTCAAAACTGGTTTGATGTATAGCTACAGCTGTAACCTAGATGTT
AGGCTATAATGTGAGCAGTCAAGCTGTACGTTTCGGTCAGGTGAGGCGTC
CCTTCGGAGTGGACTCGGTCAATCGCAGTGAGTTTGCACAGTGAAGCACA
TAGGGTACTTGTGTCATAGTTCCAAATGGTGCCCTGCTGAGCTGTGTGAG
TGATCTAAGATCAACCACATATCTGTGCGAACAATAACGAGAGATTGACC
GGGAGCCATCGAGCCTAGGCTAGCGAATGACTGTTCACAAAGACAAAGAC
CTTGTTTTAAGATCTCTTTTTCCACATCTCTGCCATCACTTTTTGGATTT
TAGCTTTTTTCAACCTGAATTTTTGAAAATTCCAACCTTTTTTAGCTTGG
ATTTTGGCTTTTTTCCAACGGAATTTTAAAAAAATCCAACCTTGTTTAGC
TAGGATTTTGGCTTTTTTCCAACTGAATTTTAAAAAATTCCAACCTTGTT
AAATTTGGATTTTGGCTTTTTTCAACCTGGATTTACGAAAATTCCAACCT
TGTTTGGTTTAGATTTTGGCTTTTTTCAACCTAGATTTTCGAAAATTCCA
ACCTTGTTTGGTTTGGATTTTGGCTTATTCCACCTGGATTTTTGAAAATT
CCAACCTTGTTCAATTTGGATTTTGGCTTTTTTCCAACTGAATTTTAAAA
AATTCCAACCCCAACCTTATTAAATTTGGATTTTGGCTTTTTTCAATCTG
GATTTTTGAAAATTCCAAGCCATGGAAAATGTAAAATTTCCAACCTTGGA
GAATGTCCCAGCCACATTTCCAGGTTGGATTTTCCATTGGATTTTATCTA
TTTTCCAATAAAGAAAACATGAAATTTCCAACCTTGGAAATCGAAATTTT
TTCCTGTGTTACCTAAGGGGGAGTCTTGACCCCTCTAGAAACTATGCCAT
TCTATTGGTTAAATTCAAGTTTTACGTCACTTCTGACACCAATAGAATGG
CTTCGTTTCGTCTAAGTCTTGAACTGAATGTTTCTTTTAGACCACGACGC
ATGGTTAAGTAAAGATGGATCTTGGTATATCACAGCATTGTGCGAATCTT
TAAATAAATACTCAGCCACCGATGATATTCACCATATTGCTACATATACA
AACGATCTGGTGGCCCAGTATTCCCATGGTGCTGGCATACCACAAATCCC
AAATCCAACATATACTTTAAGAAAACAGTTGTATTTTTTCCCTGAGAATA
TTGATACAGTGGTACGAACGGTGGCACCGAAAAAGAAATCGAAAGAACCA
GCTGAATCATGA Coding sequence (CDS) from alignment at sc0000204_pilon:101544..108955- >XLOC_040001 ID=XLOC_040001|Name=XLOC_040001|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2970bp|location=Sequence derived from alignment at sc0000204_pilon:101544..108955- (Clytia hemisphaerica_ch_hm2_pilon)
CAAGAAACAGAATTCAAGATTCAAGCAGAAAATAGCAAGAAACAGAATTC
AAGATTCAAGCAGAAAATAGGTGGATTGGAAGTTTGTATACGATGACACC
TGGCAATTCTACTACCAAACGTGAATACAGAAAGCTGATTGGCTGGCTAT
CAGACTCAATCATCAAAGCGAAACTAGATGAAATGAAATTCTTTTTGGGA
GTTCCAGGTGGATTGGAAGTTTGTATACGATGACACCTGGCAATTCTACT
ACCAAACGTGAATACAGAAAGCTGATTGGCTGGCTATCAGACTCAATCAT
CAAAGCGAAACTAGATGAAATGAAATTCTTTTTGGGAGTTCCAGCTGGCA
AAAATGAGAAAATTCAAACACCTTTGGAATTTTTCCAATACATGGAGGGA
GAAGGGCAACTAGGACAAAATAATTTCGATACCTTGATTGATATCATGGA
AACTATTGGTCGTATTGACCTCGTGCAACGAATCAAAAAATTTCAAGAAA
TTTCAAAAGAAACTGAAGCTGGCAAAAATGAGAAAATTCAAACACCTTTG
GAATTTTTCCAATACATGGAGGGAGAAGGGCAACTAGGACAAAATAATTT
CGATACCTTGATTGATATCATGGAAACTATTGGTCGTATTGACCTCGTGC
AACGAATCAAAAAATTTCAAGAAATTTCAAAAGAAACTGAAGCTCCCATC
ACTGTCGAGTTAGCACCGCAAACCTTCACATCTCCTCCAGGAAATCTATC
TTTGAACCTGCAAAGCCTCAGTCCAGGTCATGATGATCAATCAATCCAAA
GCATCAGTCCTGGAGCATCTGAAAGTATCGCCGAGGAAATGATACGCCCC
GAATTATCAGAAAAGGTGTTCACGCCACCGCCATTCCAACAAGCTGAGGA
ATCCTGTGGATCTCAGAACAGACAGACGTTTGTATTAACGTCGAATTATG
AAAATAAGAGCGGCGGATCAATGAAACAAGACCATCCAAAAGAAAGCAAA
GATATTTTAAAAAGATATAAAATGGATTCGAACCCACGTGGTATATTCTT
GATCATTAGTAACAGTGATTTTTCATTCGCTCTTGAGAAGAATGGTCTCA
CTATTAACGATAGAGACGGCACCATCAAAGATGTTGAACGTTTAGATAAG
ACCTTCACTGGATTACAGTTTGATATTAAAAAGTATCATGATTTAGATGC
GGAAAGTATGGAAAAATGTTTAGAATATTTCGCCACTTTAGATCATACTT
ATTATGATTGTTTTGCATGTTGTATTATGACTCATGGTACTGAATCCACA
CTTGTTGGGACTGATGGTGATGAAATACAACTAACCAATGTTCTCGGAAA
ATTTGAATCGGTTAAAAGTTTAATAGGTAAACCAAAACTATTCTTCTTTC
AAGCGTGTCGTGGAAAACCCGCTAAAAAACCTTATTTTACCAAAGATTCT
GCTCCTGGCGGTTATGGTGGAGCAAGTACTTGGGATGACAATATGTTTGG
GAAACGTTACACTCCACCATTGGGATCAGATTATTTCATTGGTTATGCAA
CACCACCGACTCCCATCACTGTCGAGTTAGCACCGCAAACCTTCACATCT
CCTCCAGGAAATCTATCTTTGAACCTGCAAAGCCTCAGTCCAGGTCATGA
TGATCAATCAATCCAAAGCATCAGTCCTGGAGCATCTGAAAGTATCGCCG
AGGAAATGATACGCCCCGAATTATCAGAAAAGGTGTTCACGCCACCGCCA
TTCCAACAAGCTGAGGAATCCTGTGGATCTCAGAACAGACAGACGTTTGT
ATTAACGTCGAATTATGAAAATAAGAGCGGCGGATCAATGAAACAAGACC
ATCCAAAAGAAAGCAAAGATATTTTAAAAAGATATAAAATGGATTCGAAC
CCACGTGGTATATTCTTGATCATTAGTAACAGTGATTTTTCATTCGCTCT
TGAGAAGAATGGTCTCACTATTAACGATAGAGACGGCACCATCAAAGATG
TTGAACGTTTAGATAAGACCTTCACTGGATTACAGTTTGATATTAAAAAG
TATCATGATTTAGATGCGGAAAGTATGGAAAAATGTTTAGAATATTTCGC
CACTTTAGATCATACTTATTATGATTGTTTTGCATGTTGTATTATGACTC
ATGGTACTGAATCCACACTTGTTGGGACTGATGGTGATGAAATACAACTA
ACCAATGTTCTCGGAAAATTTGAATCGGTTAAAAGTTTAATAGGTAAACC
AAAACTATTCTTCTTTCAAGCGTGTCGTGGAAAACCCGCTAAAAAACCTT
ATTTTACCAAAGATTCTGCTCCTGGCGGTTATGGTGGAGCAAGTACTTGG
GATGACAATATGTTTGGGAAACGTTACACTCCACCATTGGGATCAGATTA
TTTCATTGGTTATGCAACACCACCGAACCACGACGCATGGTTAAGTAAAG
ATGGATCTTGGTATATCACAGCATTGTGCGAATCTTTAAATAAATACTCA
GCCACCGATGATATTCACCATATTGCTACATATACAAACGATCTGGTGGC
CCAGTATTCCCATGGTGCTGGCATACCACAAATCCCAAATCCAACATATA
CTTTAAGAAAACAGTTGTATTTTTTCCCTGAGAATATTGATACAGTGGTA
CGAACGGTGGCACCGAAAAAGAAATCGAAAGAACCAGCTGAATCATGAAC
CACGACGCATGGTTAAGTAAAGATGGATCTTGGTATATCACAGCATTGTG
CGAATCTTTAAATAAATACTCAGCCACCGATGATATTCACCATATTGCTA
CATATACAAACGATCTGGTGGCCCAGTATTCCCATGGTGCTGGCATACCA
CAAATCCCAAATCCAACATATACTTTAAGAAAACAGTTGTATTTTTTCCC
TGAGAATATTGATACAGTGGTACGAACGGTGGCACCGAAAAAGAAATCGA
AAGAACCAGCTGAATCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000204_pilon | genome | sc0000204_pilon:101544..108955 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1216-1485:271 |
| Aaloc | 349-1212:4012 |
| Aaloc | 175-345:4735 |
| Aaloc | 37-171:5365 |
| Aaloc | 1-33:7413 |
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