XLOC_039973 (mRNA) -

Overview
NameXLOC_039973
Unique NameXLOC_039973
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000011_pilon:1048336..1049120+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039973 ID=XLOC_039973|Name=XLOC_039973|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=785bp|location=Sequence derived from alignment at sc0000011_pilon:1048336..1049120+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAAGATACTTGACGAGAGAGCAGGATCAAATCATATTCGTTACAG AGGTAAAATTCTCCTTTTCTCTTCTAAGagcaactttataagaataatga ggctcaaaaacaaccgaaaaataagaacaatctaaGAACAAGCTGGGTTG TCTGAATATGAAGCAAGTAAATGGTCGAAGTAGTAAAAATAGGATATAAA gattaaaataacttaaatttttgcaaagaaataagaacagccgagcctaa aaaatttactggttcttacaaaaaaggtTTAATTGTTTAATTGTAATTAG TAATAACAACTAATTTGCGCTCTCAAAAATCCATTTGGTGCATAACCTCA ATTTGACCAGGTCTGTAACCTCTAGGCTTTTTGTATTAAGAACGTATTCT AGTGAAAAAGAGACGAACTTTAGACGGAAAGTTTAAAAGCTCTCTCTTCT ACATTTTAGGAATTCAAAACTCAACCCCATTGAAACAACCAACATCCAAA ATGGCGAAGAATTGTTCAAACGCGTCCGCAACCGCAAGCGGATTCATGCC AGGCTTCCGTGTCTGGACACTGAAGGCTTTCGATGAGAGGGGACAATGTA TTGTTGAAGTTTCACAAGACATGGGCAGcaataataaaaaatacaaacac TTCTGCGAACAAATCGCCGCTAAGGGATACCAATTAACCGCCAGCCAAGC GGCAGAATTGAGCAGCACCCTTTATCTCAATATAAATTGGGACAACAGTA ATGTTTCCTTCAAACAGTACATGCAAATGATATAA

Coding sequence (CDS) from alignment at sc0000011_pilon:1048336..1049120+

>XLOC_039973 ID=XLOC_039973|Name=XLOC_039973|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=756bp|location=Sequence derived from alignment at sc0000011_pilon:1048336..1049120+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAAGATACTTGACGAGAGAGCAGGATCAAATCATATTCGTTACAG
AGATGGATAAGATACTTGACGAGAGAGCAGGATCAAATCATATTCGTTAC
AGAGGAATTCAAAACTCAACCCCATTGAAACAACCAACATCCAAAATGGC
GAAGAATTGTTCAAACGCGTCCGCAACCGCAAGCGGATTCATGCCAGGCT
TCCGTGTCTGGACACTGAAGGCTTTCGATGAGAGGGGACAATGTATTGTT
GAAGTTTCACAAGACATGGGCAGcaataataaaaaatacaaacacTTCTG
CGAACAAATCGCCGCTAAGGGATACCAATTAACCGCCAGCCAAGCGGCAG
AATTGAGCAGCACCCTTTATCTCAATATAAATTGGGACAACAGTAATGTT
TCCTTCAAACAGTACATGCAAATGATATAAGAATTCAAAACTCAACCCCA
TTGAAACAACCAACATCCAAAATGGCGAAGAATTGTTCAAACGCGTCCGC
AACCGCAAGCGGATTCATGCCAGGCTTCCGTGTCTGGACACTGAAGGCTT
TCGATGAGAGGGGACAATGTATTGTTGAAGTTTCACAAGACATGGGCAGc
aataataaaaaatacaaacacTTCTGCGAACAAATCGCCGCTAAGGGATA
CCAATTAACCGCCAGCCAAGCGGCAGAATTGAGCAGCACCCTTTATCTCA
ATATAAATTGGGACAACAGTAATGTTTCCTTCAAACAGTACATGCAAATG
ATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_039973XLOC_039973-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011_pilongenomesc0000011_pilon:1048336..1049120 +
Properties
Property NameValue
Aaloc55-378:462
Aaloc1-51:1