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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000403_pilon:16280..21715- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039961 ID=XLOC_039961|Name=XLOC_039961|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5436bp|location=Sequence derived from alignment at sc0000403_pilon:16280..21715- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGTGTTACGGGCTGACACAAATCAACCAAAAATTGATATGGGACC
TGCCCTCATTCACTATCGAAAAGTATTTTCGACTTATCATTATTTTGCGT
CCAGCTTGGTCAGCATCAACCAAGAGATGTCAGAGTTAAAATGCTTTGGC
ACGGATGGAGAAACTGCCTTATCCGATGCTTTCGCCAAAACTTTTCCCCT
TTCTGACCAATTGAGGTGCTTCATTCACTCGAGAAAGAATGTTGAACAAA
AACTTACTGACTTTGGCTTATCAAGCTGCAAATCAACGATCGTAGAAGAC
ATATGTGACCCTCCAAACGATTTGGTCGTGCTCGTGCCGCTTTCCGACTG
GTTAATTGTGCGAGTAAAAGTTGAAAAAAGCGGCCAGAAGACCGCACAGT
ACCGTATGGTCCGTGCGTACAAAACGCCGACTAAAGCGGACGATGGTGCG
GTCCTCGTCGACTAAAGCGGACGATGGTGCGGTCCCGCCGTTTGTATGTA
TGTTGTATGCTGTTTGTTATGATTTCTCGTTTGCCGGCAAACGTTTCGAA
CGGCAAAATGTCCGCACCATGACCGCACTGAATACCGCACTTATTCAAAT
GGTGCTCTTTAGTGACCGATCGAGTGCGTTTGAATGGATTTTTAGAAAAG
ATTTTTGGATGATTTCTGGCCGATACAAAGGTATAATTTTACCGCACGGT
AAATCATTTCGCCGCTTTTTTACCGCCCATATTATCGATCTGTCCGCACC
AAGACCGGTCTCATTTTTAATGTACTCCAAATCGCTTGGGGGGTCACATA
TTTGGAAAGACGGAAGGCACGCATAGGTAATTTTAGCTTTGTTTTCTTGA
GTAAATCTTTAAAGATATTTCTTTGTAGGTAATGGTTTAAGGGTTGATGG
AAACTTCAAAAATGGTCGCATTTGGCTAAAATTTAGCACACTTGTTTCTT
GGGTGAATATCTGGGGGTGTTCTTTTTCCTTCGCTGGGTGAATATTTGAG
GTTATTTTTGGACCTGTTTGGTGGTCCTTTGAATCAATCTTTGTCCGTTC
GTTCGCCCGTCTATTACTTGTCTGTACACAAACTCAGTATCTACGGCTTA
TTTCAAAATTCATTGCCGTAGAGGGTCTGTTGTCATTGTCTTTTCTCATT
TGAGAAAAGGGATTTTTTTGGCATTTTCTCGAGAATTCCTCATTAGTTTT
TCTGATTTTTTGCACATTAGCACATGCGTATTAGAAATGCCCAAAACATG
GCCAAGTCCGATTTTGAAGAAAACTTTTTTTTTCCGGCCGAAAATGCTTG
AAATCGCCGTTTTCGATAATTTTTGATGACCATTTGTTTATTTTGTTTCA
GTCCCTTTTCTTATTTTACTTCCTTTTCTATTTCCATTCTATATTTATCA
TTAGGTAGGCCCATTATGCATTTTGCTTGTTTATTTTTCATTTTTTTGAA
AGTTTTGATTTTTTGGACCTGGGGACAAGTTTTTCATTAAAACTAGGCTT
TTTTTATTGGACTTAGCCTATCAATTTTACAATAGTCCTTTTCATAAATT
ACATCACGAACAATACTTGCCTCGTTTTAAAATTATTGCTATTGTGAACT
ACTTTCTATTCTTATTCATAAAAAAAAATCATTTAATGTTTCAAGGGACA
TAGTCGCCATGGTAATTGTTTGAATACGAGGCAGTTGTTTGTGACAAAAT
TTATGAAAAGATCTATTCGGCCTACGAATAATTAAAAAATACTAAGCCTA
GTGCCGTTAGCATGTTCGTCAGTTCTTTCAGAGCTAAAATTTTGAGAGTG
TGATTTGTAATCTGGCCTGTTACTCTAGGGAATTCAATTTTCGGAATAGC
TTTGTCTCTCCAAGGGTTATTTGAAACATACTAGTCTTTTAAGGGTTGAA
TTTTCATACATTGACTCTCTAAGGATAAGCTTGTATCTCAGTTATAGGCT
AGACAGTGGGGTCATGCAGTTGGTACGAGACATCATGATGACTAACTGCA
AAATTGAAAATTTGGAAGTACGCCCACCACCCCTCAGCAGTTAGTACCCA
AAAGTACTAAGTGCTTTTGACTATTGACATGTTGACACCACTCCTATTCG
CACTCGGTACCCCAAAGTACTAAGTGCATTTGATCATTGACAGGTCGACA
CCATCCCTATTCGCACTTATTACCCCAAAGTACTAAGTGCATTTGACTAT
TGACAGTACCATTTGATTGTCTTGAAATTTACAGTAGACCACCCTTTACA
GCAGCAGCAAATTCAAAAAATCAAATACGACCCACCACGGTACTAACCGT
TATGATGTCTGGTACCAACTGCATGACCCCCTGGCCTAGAGGCCCGCCTA
GAGGTCTGTTAAATGTACTCCTAGGTGCCTAATAAATGCCCCCTCCCTCT
GTTTGGTAATTTTTCGACATTTTCGAACAGGCATGGGTCTTACTTTAGGT
ATGCAGTGTCCGATAACTAGAAGTGTCCGCCTTTTAGAAGCTTTTCAATT
CTGTGCTCTAATTTTGGTATGTGGTAATTAAGGGGTTAATTATGTGAACT
TTTGGCCCGAAGTGCTTTTCTAGAGAAAATAGGACATGGAAAAACAGGAG
AGTGTTTATTCAAATGCAAAAATTTACCGGCTGGATAAAGGGAGCGCTCC
AAACGTCTATAAGCAATTTGTTCTATAAAGCTTTGAAGTGTTTAAGAAAT
TAATAGTTGGGATAAATCAATCCGTTGAACTTTTTAAAGTCTGACCGGTT
CGACCTTCGATGTCCGCTAATTAAAGAGGAAAGAGTAGGAATTGGCATTC
TTATGCAAAAAACTTAGTCCGCTAATTGAGTGTCCGCCCTTTGGAAACTT
TTTGGACCTAACTGGAGATCCTATAAATTAACCTTTGTCCGTTCGTTCGT
TCGTTCGTTCGTCCGTCCGTCCGTCCGTCCGTCCGTCTGTTACCAGCTTT
TCTCGAGATTGGCTCATTAGTTTTTTCTGATTTTTGGCACAAAGATGCGT
ATTAGCAATGCCCAAAACATGGTCGAGTCCGATTTTTGAGGAAAATTCTT
GTCCGGCTGAAAATGCCGGAAATATGCCGGAAATCACCGTTGTTGCAGAT
TTTTCCTTGCATTTCTAGTTTTTCCACATAAAATATTGTTGATAGCAATT
AATTCCCAATATTTTTTTAAAATTGCCGGAGCAGCCGATTTTCGTGCCCG
CAAAACGAATTTTCTTCAATTTCTCAGGTCTTACTCAATATTTCATTCAT
GTATTTTTGGTCTATTCTTTCGCTCGCTCTTTCATTCGTTTACACGTTCG
TTCGTTCGTTCGATCGCTCATTTTTTCGCTTAGCTTTTCCATTAATGTCT
ATGTTTTCTCTCATTTGGCTAACTTTCGTCATCAGGTAGGTCCAATCAGC
ATCCAGCTTGTTTTAAGAGGATTTGACTAGGAGATAGCCGGAGAAAAAAA
ATTGTTCGCTAATCAGAGGTCGCCTTTTAGAATGTCCGTTAATTGAAGGT
TTTACTGTACAAACTTTCGCAAGGTTGAAAAAACCGTGAAATTTAGTTAC
CTTCGCGAGACGAAAAAAGTGTTTTTTAGCGAGCATGAACTTTTTACATA
AAATTGTATAATTTCACACGAAAAAGGCTTATTTTAAATTGGGTTGAGAC
TTTTTTGTTTTAGGTTTAAGTAGATAGATAGATATGAGCCCTCGGAATGC
ATTCGGGATGGGTCCTACCCACAAAGGTATAGGAATCACGGCGCTGACAG
ACACAGCCACTTGACAGACGTAAGCTGCCAAGCCATGGCGTATACCATGA
CACTCGAACGACACTGGGATAGCGGTGCTCACGCGAGGCCGAATCTTATG
AGTGCCACGGCACGTCACAATGTCTGTCTAATCTACCCACACTCTTGTAT
CAGAGTAATGGTACCCAATTCCCCTCACATGGCATGGGTTGACCCGGGCG
AAGGTATTTTCACTTGCCAAGTGAATCGTAGAGACACGGTGGGTATCGAT
CTCGGGCATCCCAGGCGAGAGTCAAGGATGATAACCACTCTACCACTTCG
CCTTTCTCTTTTTGTGGGGGTATTTAGAGTTACAATTTCTGAATTCCCGG
CAATTATGTTATTCCCCCGCTTATTATCATATTTAATTTTGTTTCCAATT
TCAGATATGATGGATTAGTACACGCTACTGACAAAGATACTTTTGACGCT
CTGGTTGAATCTTTAAAGGATAAATGGGACAACTTGGAGTTTCCTTTTCT
CCCAAGAATGATTGCAATGCCCAGGTTTCACAAGTGGTTTGTGGATAACA
TCGCTGGATACATGAAAAGCACCATGATCGAAAATGTTCGAGCAAGAAAC
GGAATCGATGGTTCATTCACAACAAATCAGAGTGAAAGCTTAAATGCTGA
GTTGAGGAGAAAGGTTAATTATCAAACAAATGAGTTGCCTGACTTTCTCG
AGTTAATGAGACAGTTTTACAAGTCACAGGAATCTGAAAATCAATCTGCG
TTTGTTGGTGAAGGCGATTTCCTCATCTCTGATCTATTTTCCAAATTTCA
AGCCGGGGAATCATATTATAACATGTCCATTTCCGAGCGCACAGCTTTCG
AAAAGCGGTTCTACAACTCCAGCCCCGCTGATTCACAAAAGGAGAGTTTG
TTTGATGAGATCACCATTCCTGGCCTTGACGCAGATCATAGTCGAAATAT
CGTTTCCAAAGCGGAACGAATACTTGAAATGGATGGGGTTGTGCCATTTA
GTTCGTCTGGATCTTTTCACGTAATCAATAGTGAGGGAAGTCGACCACAT
TACGTTGTGCAAAATAAAGACGGATCATTTACTTGCGATAATAGGAACCT
CCGAAACGGATGCATCGGATTCAACGCCAGCAATGTTTGTTCGCATACTT
ACGCAGCTGCCAAGTTCTCGCGGAAATTACAAAGTTTCTTCAAGGCCCTC
GAGAGAAAAGAGTCAAAAGCCTCCGGTAATAATCTTACCAACATTTCACA
TTATGGTATCTCAGAAGGCGCTGGGAAAAAAGCCGGTGCAGTCCGAAAAC
GTAAACAAACTCAAGAAATCGCCACTACTTCACCAATGTTGGTGAACCAA
TCTTTGAAACTTCGTGTAATCAAGCATAATGGCAATCACGTGGCTGTCCC
CACGACTGGAAAGGATTACACAAAATCAAAACTGTTCGTTCGTGTGCAGG
TTGTCCCTATTCTTTTGCAAGACTCGCGAACAAGGATGCATTCCCCCCGC
CCGACGATATTGCAATCTGCCACAAAGAAAACGCTGTTTGGAGAGACAAA
GCTACGGGAACTTTGCGACAATCTAATAAATTATCGAATCGCTATTACCA
TGTCAATCCGGTTTGTGTCCGCAAAGGCAGTGTCGAGAACAAAAACTTCT
CATTTGAAGACTTGGATATTTCCACAGTCGACCTAA Coding sequence (CDS) from alignment at sc0000403_pilon:16280..21715- >XLOC_039961 ID=XLOC_039961|Name=XLOC_039961|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3222bp|location=Sequence derived from alignment at sc0000403_pilon:16280..21715- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCGTGTTACGGGCTGACACAAATCAACCAAAAATTGATATGGGACC
TGCCCTCATTCACTATCGAAAAGTATTTTCGACTTATCATTATTTTGCGT
CCAGCTTGGTCAGCATCAACCAAGAGATGTCAGAGTTAAAATGCTTTGGC
ACGGATGGAGAAACTGCCTTATCCGATGCTTTCGCCAAAACTTTTCCCCT
TTCTGACCAATTGAGGTGCTTCATTCACTCGAGAAAGAATGTTGAACAAA
AACTTACTGACTTTGGCTTATCAAGCTGCAAATCAACGATCGTAGAAGAC
ATATGGCCGTGTTACGGGCTGACACAAATCAACCAAAAATTGATATGGGA
CCTGCCCTCATTCACTATCGAAAAGTATTTTCGACTTATCATTATTTTGC
GTCCAGCTTGGTCAGCATCAACCAAGAGATGTCAGAGTTAAAATGCTTTG
GCACGGATGGAGAAACTGCCTTATCCGATGCTTTCGCCAAAACTTTTCCC
CTTTCTGACCAATTGAGGTGCTTCATTCACTCGAGAAAGAATGTTGAACA
AAAACTTACTGACTTTGGCTTATCAAGCTGCAAATCAACGATCGTAGAAG
ACATATTTGGAAAGACGGAAGGCACGCATAGATTTGGAAAGACGGAAGGC
ACGCATAGATATGATGGATTAGTACACGCTACTGACAAAGATACTTTTGA
CGCTCTGGTTGAATCTTTAAAGGATAAATGGGACAACTTGGAGTTTCCTT
TTCTCCCAAGAATGATTGCAATGCCCAGGTTTCACAAGTGGTTTGTGGAT
AACATCGCTGGATACATGAAAAGCACCATGATCGAAAATGTTCGAGCAAG
AAACGGAATCGATGGTTCATTCACAACAAATCAGAGTGAAAGCTTAAATG
CTGAGTTGAGGAGAAAGGTTAATTATCAAACAAATGAGTTGCCTGACTTT
CTCGAGTTAATGAGACAGTTTTACAAGTCACAGGAATCTGAAAATCAATC
TGCGTTTGTTGGTGAAGGCGATTTCCTCATCTCTGATCTATTTTCCAAAT
TTCAAGCCGGGGAATCATATTATAACATGTCCATTTCCGAGCGCACAGCT
TTCGAAAAGCGGTTCTACAACTCCAGCCCCGCTGATTCACAAAAGGAGAG
TTTGTTTGATGAGATCACCATTCCTGGCCTTGACGCAGATCATAGTCGAA
ATATCGTTTCCAAAGCGGAACGAATACTTGAAATGGATGGGGTTGTGCCA
TTTAGTTCGTCTGGATCTTTTCACGTAATCAATAGTGAGGGAAGTCGACC
ACATTACGTTGTGCAAAATAAAGACGGATCATTTACTTGCGATAATAGGA
ACCTCCGAAACGGATGCATCGGATTCAACGCCAGCAATGTTTGTTCGCAT
ACTTACGCAGCTGCCAAGTTCTCGCGGAAATTACAAAGTTTCTTCAAGGC
CCTCGAGAGAAAAGAGTCAAAAGCCTCCGGTAATAATCTTACCAACATTT
CACATTATGGTATCTCAGAAGGCGCTGGGAAAAAAGCCGGTGCAGTCCGA
AAACGTAAACAAACTCAAGAAATCGCCACTACTTCACCAATGTTGGTGAA
CCAATCTTTGAAACTTCGTGTAATCAAGCATAATGGCAATCACGTGGCTG
TCCCCACGACTGGAAAGGATTACACAAAATCAAAACTGTTCGTTCGTGTG
CAGGTTGTCCCTATTCTTTTGCAAGACTCGCGAACAAGGATGCATTCCCC
CCGCCCGACGATATTGCAATCTGCCACAAAGAAAACGCTGTTTGGAGAGA
CAAAGCTACGGGAACTTTGCGACAATCTAATAAATTATCGAATCGCTATT
ACCATGTCAATCCGGTTTGTGTCCGCAAAGGCAGTGTCGAGAACAAAAAC
TTCTCATTTGAAGACTTGGATATTTCCACAGTCGACCTAAATATGATGGA
TTAGTACACGCTACTGACAAAGATACTTTTGACGCTCTGGTTGAATCTTT
AAAGGATAAATGGGACAACTTGGAGTTTCCTTTTCTCCCAAGAATGATTG
CAATGCCCAGGTTTCACAAGTGGTTTGTGGATAACATCGCTGGATACATG
AAAAGCACCATGATCGAAAATGTTCGAGCAAGAAACGGAATCGATGGTTC
ATTCACAACAAATCAGAGTGAAAGCTTAAATGCTGAGTTGAGGAGAAAGG
TTAATTATCAAACAAATGAGTTGCCTGACTTTCTCGAGTTAATGAGACAG
TTTTACAAGTCACAGGAATCTGAAAATCAATCTGCGTTTGTTGGTGAAGG
CGATTTCCTCATCTCTGATCTATTTTCCAAATTTCAAGCCGGGGAATCAT
ATTATAACATGTCCATTTCCGAGCGCACAGCTTTCGAAAAGCGGTTCTAC
AACTCCAGCCCCGCTGATTCACAAAAGGAGAGTTTGTTTGATGAGATCAC
CATTCCTGGCCTTGACGCAGATCATAGTCGAAATATCGTTTCCAAAGCGG
AACGAATACTTGAAATGGATGGGGTTGTGCCATTTAGTTCGTCTGGATCT
TTTCACGTAATCAATAGTGAGGGAAGTCGACCACATTACGTTGTGCAAAA
TAAAGACGGATCATTTACTTGCGATAATAGGAACCTCCGAAACGGATGCA
TCGGATTCAACGCCAGCAATGTTTGTTCGCATACTTACGCAGCTGCCAAG
TTCTCGCGGAAATTACAAAGTTTCTTCAAGGCCCTCGAGAGAAAAGAGTC
AAAAGCCTCCGGTAATAATCTTACCAACATTTCACATTATGGTATCTCAG
AAGGCGCTGGGAAAAAAGCCGGTGCAGTCCGAAAACGTAAACAAACTCAA
GAAATCGCCACTACTTCACCAATGTTGGTGAACCAATCTTTGAAACTTCG
TGTAATCAAGCATAATGGCAATCACGTGGCTGTCCCCACGACTGGAAAGG
ATTACACAAAATCAAAACTGTTCGTTCGTGTGCAGGTTGTCCCTATTCTT
TTGCAAGACTCGCGAACAAGGATGCATTCCCCCCGCCCGACGATATTGCA
ATCTGCCACAAAGAAAACGCTGTTTGGAGAGACAAAGCTACGGGAACTTT
GCGACAATCTAATAAATTATCGAATCGCTATTACCATGTCAATCCGGTTT
GTGTCCGCAAAGGCAGTGTCGAGAACAAAAACTTCTCATTTGAAGACTTG
GATATTTCCACAGTCGACCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000403_pilon | genome | sc0000403_pilon:16280..21715 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 331-1611:1282 |
| Aaloc | 304-327:4637 |
| Aaloc | 1-300:5437 |
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