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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000088_pilon:427687..429897+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039937 ID=XLOC_039937|Name=XLOC_039937|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2211bp|location=Sequence derived from alignment at sc0000088_pilon:427687..429897+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGGCATGGAACAACAGCGAATTGTCTGTTTCGAAAGATATGAAAATCGT
TGATAGAGTGCGCTTTTTTAAGGGTAATGAATGTCGATAGATCTTATAAT
TTCTCTTTTGAAACCCAGGGATTcatctaaaaaaagtttttctattttga
attcAATATAAAAGAAATAAGATTATACGGCCACttgatttatttcattt
tttttagtccaaattcaTATGAGATCAAaccagaaaaaaaactaatttga
aaacCGTGTATTAGGACAAGCGAACCGCGCATGTTTCTCGGTGCCATCCT
TATTAAGTttgtacgcagtgaagggggaggGACCAAATTGATTATTGCGT
GAATGCAGATTCGCGAATTTGGCTTctaattgaccaaatttctttAATGT
TCTAATTCCTAGTCGTTTCGGCCACTTCAGATATCTCTGGTTAAAATTTA
AATCTACTTTCGGAAATATATCGCACGAACTAGAAAGAGACCGCTAAAAT
AGACTAACTCTTACAATACATcccttcttacagacccactggaaataTTG
GCCGAAATaacgtccccggtggaaaattaccccccaatttttgtccccac
tgaaaataatcaaataaatattaactatttttcccatccccctgaatttt
ctgacttaaaaacaaagaattgaaatccccagccattaaaatacgggaat
atcaatccccatcgagtttcagtccgttctTTTCATTACCACTGGCTGAA
GAAATcctatcgggtctgtgagaagggggtgttataatGTATTAAAAGGG
AGGTTAGCTGGGCGCTATAAACCTTATGGCAGAGTACTTCCTAAAGTATA
TAGTATAACTGTCTTTATCATTTTCGCAAAATCTGTCGAacgaaatttgt
tcaaatttctttcaaacGAAACTTTAATTTTAGGTGATGGACCTGCGTGT
CAACTAGAAGCAGGCCATCAGAAAGGTGGCAATTATTATTGCTGGTGTTG
TGATATGAAGGCCTCTCGTAGCGCTGACCTGGCCTACGTATTCGGGTGCA
CCAGACAATCACTCCAAGATAAAATAAACAGATTAACCAAAACTAGGTAA
GGAATTAAAGAGGGTCAACTTTTAGCAGGCTTTTCATGTGTGCGAAGTAG
ACCAGAAAAGCTTAATATAAATCAAATGTGATTTAGGGGGAGGTTTGAAG
TGGCAAAGTAATGTTCcacactttctttttattttaccaaaaattttaGC
TATGGAAAACAATGTGTACATAATCAAAAAATGTCGATACTTGATGGCAT
TCCAAAGGTAGAGATCGtggaagaattgaaaaaacGTGGCGTCCAAGTCA
ACAAAGACCAAAATAAAGACGTGGTTTTGAAACAGCTCGAAGATATTTTC
GCAGGTAAACACGATGTTTCAATCCGAAAATGTTGAagcaaaaacatgaa
aacagcacaaaacgttgtttttaATTCTCGTCTCGGTTTCTTGTTTAGGA
GTCCAACACCTTCCAGCATTACTGTTCGAATCGGGAAAGACAAGCCTTGA
AAAGGTCGGTTTGGAATCGTACGAAGTACTTGCATGCGACCCTTTACACA
CCTTCAAAGGTTTGACGACCAATCTTTACCAAGAGATCCCTCGTCACCTT
CAGggcgaagaaaaaaatctttttaaggaCTCGGCGCGAGCATCCTTTCA
TGGCAAAGAGGCAAAAAATGGTGGAGACTACAGGCGAAGCCTGGTGGACC
TGACGATTTACTTGGATGGAGAAATGACTGATGCGTACGTCAAACTCATG
AGGCAGCTCGCTGAATTACAAGAAATTGCATATTCCGGTGAAGAAAAGCG
TACAGCCAAGTCGATTTTACGCTTCCACAACGTGTCATTCTTGCACGCAG
ACTTGATGATTGAGCTTTTCGAAAAGCAGAAATCCATGAGCCGAAGAAAA
CTGTTTGGACAGTACAACCATTCGCTGACCAGTCATGCGCCAATCCAATA
TCGGATTCTGGATTTGGTTTCGGCAAATACTGAGCAAGAGGAGGCTGCAT
TCAATTTCATGAAAGAAGTCAGTAAACACGCTTCCAATCATCATCCCGAT
AATATACTGCTGACCTGCTTTCTTCGTATCCAAATCCGAGAAGACTGGCA
ACGTCACTTGGGCATCCTGAAAAAGGAAACAAGAAATGCTATTAGCAAAC
ACGGCGATTTG Coding sequence (CDS) from alignment at sc0000088_pilon:427687..429897+ >XLOC_039937 ID=XLOC_039937|Name=XLOC_039937|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2208bp|location=Sequence derived from alignment at sc0000088_pilon:427687..429897+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGGCATGGAACAACAGCGAATTGTCTGTTTCGAAAGATATGAAAATCGT
TGATAGAGTGCGCTTTTTTAAGGGTGGCATGGAACAACAGCGAATTGTCT
GTTTCGAAAGATATGAAAATCGTTGATAGAGTGCGCTTTTTTAAGGGTGA
TGGACCTGCGTGTCAACTAGAAGCAGGCCATCAGAAAGGTGGCAATTATT
ATTGCTGGTGTTGTGATATGAAGGCCTCTCGTAGCGCTGACCTGGCCTAC
GTATTCGGGTGCACCAGACAATCACTCCAAGATAAAATAAACAGATTAAC
CAAAACTAGGTGATGGACCTGCGTGTCAACTAGAAGCAGGCCATCAGAAA
GGTGGCAATTATTATTGCTGGTGTTGTGATATGAAGGCCTCTCGTAGCGC
TGACCTGGCCTACGTATTCGGGTGCACCAGACAATCACTCCAAGATAAAA
TAAACAGATTAACCAAAACTAGCTATGGAAAACAATGTGTACATAATCAA
AAAATGTCGATACTTGATGGCATTCCAAAGGTAGAGATCGtggaagaatt
gaaaaaacGTGGCGTCCAAGTCAACAAAGACCAAAATAAAGACGTGGTTT
TGAAACAGCTCGAAGATATTTTCGCAGCTATGGAAAACAATGTGTACATA
ATCAAAAAATGTCGATACTTGATGGCATTCCAAAGGTAGAGATCGtggaa
gaattgaaaaaacGTGGCGTCCAAGTCAACAAAGACCAAAATAAAGACGT
GGTTTTGAAACAGCTCGAAGATATTTTCGCAGGAGTCCAACACCTTCCAG
CATTACTGTTCGAATCGGGAAAGACAAGCCTTGAAAAGGTCGGTTTGGAA
TCGTACGAAGTACTTGCATGCGACCCTTTACACACCTTCAAAGGTTTGAC
GACCAATCTTTACCAAGAGATCCCTCGTCACCTTCAGggcgaagaaaaaa
atctttttaaggaCTCGGCGCGAGCATCCTTTCATGGCAAAGAGGCAAAA
AATGGTGGAGACTACAGGCGAAGCCTGGTGGACCTGACGATTTACTTGGA
TGGAGAAATGACTGATGCGTACGTCAAACTCATGAGGCAGCTCGCTGAAT
TACAAGAAATTGCATATTCCGGTGAAGAAAAGCGTACAGCCAAGTCGATT
TTACGCTTCCACAACGTGTCATTCTTGCACGCAGACTTGATGATTGAGCT
TTTCGAAAAGCAGAAATCCATGAGCCGAAGAAAACTGTTTGGACAGTACA
ACCATTCGCTGACCAGTCATGCGCCAATCCAATATCGGATTCTGGATTTG
GTTTCGGCAAATACTGAGCAAGAGGAGGCTGCATTCAATTTCATGAAAGA
AGTCAGTAAACACGCTTCCAATCATCATCCCGATAATATACTGCTGACCT
GCTTTCTTCGTATCCAAATCCGAGAAGACTGGCAACGTCACTTGGGCATC
CTGAAAAAGGAAACAAGAAATGCTATTAGCAAACACGGCGATTTGGAGTC
CAACACCTTCCAGCATTACTGTTCGAATCGGGAAAGACAAGCCTTGAAAA
GGTCGGTTTGGAATCGTACGAAGTACTTGCATGCGACCCTTTACACACCT
TCAAAGGTTTGACGACCAATCTTTACCAAGAGATCCCTCGTCACCTTCAG
ggcgaagaaaaaaatctttttaaggaCTCGGCGCGAGCATCCTTTCATGG
CAAAGAGGCAAAAAATGGTGGAGACTACAGGCGAAGCCTGGTGGACCTGA
CGATTTACTTGGATGGAGAAATGACTGATGCGTACGTCAAACTCATGAGG
CAGCTCGCTGAATTACAAGAAATTGCATATTCCGGTGAAGAAAAGCGTAC
AGCCAAGTCGATTTTACGCTTCCACAACGTGTCATTCTTGCACGCAGACT
TGATGATTGAGCTTTTCGAAAAGCAGAAATCCATGAGCCGAAGAAAACTG
TTTGGACAGTACAACCATTCGCTGACCAGTCATGCGCCAATCCAATATCG
GATTCTGGATTTGGTTTCGGCAAATACTGAGCAAGAGGAGGCTGCATTCA
ATTTCATGAAAGAAGTCAGTAAACACGCTTCCAATCATCATCCCGATAAT
ATACTGCTGACCTGCTTTCTTCGTATCCAAATCCGAGAAGACTGGCAACG
TCACTTGGGCATCCTGAAAAAGGAAACAAGAAATGCTATTAGCAAACACG
GCGATTTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000088_pilon | genome | sc0000088_pilon:427687..429897 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 394-1104:1501 |
| Aaloc | 238-390:1251 |
| Aaloc | 76-234:936 |
| Aaloc | 1-72:1 |
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