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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000097_pilon:1022217..1024664+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039936 ID=XLOC_039936|Name=XLOC_039936|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2448bp|location=Sequence derived from alignment at sc0000097_pilon:1022217..1024664+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTACAACACTAGGAGTAGTAGACACTCTTCAAGTTTTGCCACAAGA
AAATCAAATGagttttaaagttaaaaaaaatcaaaggtgTAAACAAAAGC
ATACCATTATGGAGGTAAGATACAAATCTGTCATACAGTAGAGAGTTTAT
ATAAATATGATTATACCTTGTTATTATCTTGGGAAGATCAACCCGCTTTC
AGTTAGTCTAAGAAATCATggtaaaaacaacatcagtcaacgaccctcga
catggcccgagaattctcaggccaaaacttttattggaattcgcgtaaag
cccgagtatggcccgagctggcccgagaattctcgggccatgttcgggcc
gcgCACGGGCCACattcgggccaatttttgaaaacatgatttaaacaggc
gtgtaatttcaggactgatttttttaacattttctttgagaaaaacttgg
tttctcttaattatattagatatatgaatgttgtaaattcatataaatat
taaatgtcttatttggtatgaaaacatagttataaatatacttagggtgg
aaatatttgctagtaaactggtcctggttttaaactgaagcgtgtccacg
ggaagctcgtaaagtttttttgagcgatataaacaaaacagacaaatctt
attttgtactattttgtttgactggacatgctaaatcaatttaacattta
acatggcccgaacatggcccgaatgactcgggtcatgttcgggccaaaag
aattgatagggtctctcggcccgaacatggcccaaAGAGGCTCGAGAATT
CTCAGGCCATGTCGATGGGTCGTATCAGTCATCTACTggaaagtgctggg
tcaaaaatttgcattaagccaatctcaagatatcggtcaaaaaCTGATTT
TGATGTGTTTTTTCGATGTATTTTATAACGTCAAAATCAAtttttgaccg
atatcttgagattggcttaatgcaaatttttgacccagcacttttcgaaa
tccgctCGTTCatatgattcttttgagctatatatgaacgttgaggaata
attggaagcggtgcgcgtcacgcaaaatatatttgggacatgccttgttt
cacccgaggggggggtggggttcgaataaacaggggggatggaaaatctt
cgagattttaataaacgggggagacctaattgccaggggggttggaaatt
gtacttctgaaaacccaaaataaggtaaatataggctaaaatcaggctaa
tTAGAGCAAAATAAAGGGCCTTctttttgacagctgaaaatatttttaag
aattaataaacgggggggtcctaataaggtccggggcagtttaaaaattt
tccaaaaattaacaagcggggacccgtttatttggcacctaagagtacgt
aTAAATATTGGTCTAATGTTAAATGTCAACAAGattttatctttccaaca
aggtAGTCATATTTTCCCTCAAGAAGAGCAATCTATCAAAATATGGCAAC
TGGTAATTTTTTGGGAACATACTTTAAAACTTTTCAGGATACTTCTATTT
TCCTGCTGATTTTCTTGATCTGGTGATAATTCATGTTACtcaaacttgat
tttttgatttctatTAGGTAACAGGATTTTCAACACAGCCATACAGAAAC
CAGAACGCTGgatcaaaagaaaataatttatcgTTGCAGAATGTCTCATC
GGATGAAGAAGAAGTTTGCTTTTGCTTCCACGAGGATGATGTCCTTGATG
AATCTTTTTTCAGTGATTTGATGtacaaaagcaagaaaaaacaattaaag
TCATCGCGACCAAAGCGCAAGGTCAGATCAACTGTGAAACAGACATTTAG
AAACAAGCAGGAATTTTTCAAAGGGAATGATAACAACAATAAAGGTGTTG
ATGATGAAGTCGAATTAACACAAGTCCTTAGAGAACTTCCTCCAAAGATC
AATCTAAAtttgaatcaaatcaaaaaggaaatttcaaaatgtcaaacaat
cGAGGACAACCATCTTCTACACAAGAGGAATATTAAtaaaaagctaaaga
aaaacaatattttgagaTGCTCCCAGCTCCCTAAAAGTTATTCATTACCA
AACCAAAGCCGAATTTCTCAGCAAAAACTCGAATACAAGTCTGTTGAAGA
GAAAATGCTAGAACTTCAATACCGTGATATTAGTTATTCAGATTATGAAC
TTCTCTTGACACTGGACGATACAGTTAAACCGCCAACTGCAAACAAGTCA
ACCCTCAATAAACTATCACAAGAAATGAAGAGGAACAGTGACAGTGAATT
ATGTGTAATTTGCATGGGTGATATTTTGTTTCAGGAAATTGTTATTACTT
TACCGGAATGTGGACACCGTTTTCATAAATCTTGCATAGAAAATTGGTTA
CTGAATTGTTCGAAACAATGCCCTGTGGATATGACATATATTTGTTAA Coding sequence (CDS) from alignment at sc0000097_pilon:1022217..1024664+ >XLOC_039936 ID=XLOC_039936|Name=XLOC_039936|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000097_pilon:1022217..1024664+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTACAACACTAGGAGTAGTAGACACTCTTCAAGTTTTGCCACAAGA
AAATCAAATGagttttaaagttaaaaaaaatcaaaggtgTAAACAAAAGC
ATACCATTATGGAGATGCTTACAACACTAGGAGTAGTAGACACTCTTCAA
GTTTTGCCACAAGAAAATCAAATGagttttaaagttaaaaaaaatcaaag
gtgTAAACAAAAGCATACCATTATGGAGGTAACAGGATTTTCAACACAGC
CATACAGAAACCAGAACGCTGgatcaaaagaaaataatttatcgTTGCAG
AATGTCTCATCGGATGAAGAAGAAGTTTGCTTTTGCTTCCACGAGGATGA
TGTCCTTGATGAATCTTTTTTCAGTGATTTGATGtacaaaagcaagaaaa
aacaattaaagTCATCGCGACCAAAGCGCAAGGTCAGATCAACTGTGAAA
CAGACATTTAGAAACAAGCAGGAATTTTTCAAAGGGAATGATAACAACAA
TAAAGGTGTTGATGATGAAGTCGAATTAACACAAGTCCTTAGAGAACTTC
CTCCAAAGATCAATCTAAAtttgaatcaaatcaaaaaggaaatttcaaaa
tgtcaaacaatcGAGGACAACCATCTTCTACACAAGAGGAATATTAAtaa
aaagctaaagaaaaacaatattttgagaTGCTCCCAGCTCCCTAAAAGTT
ATTCATTACCAAACCAAAGCCGAATTTCTCAGCAAAAACTCGAATACAAG
TCTGTTGAAGAGAAAATGCTAGAACTTCAATACCGTGATATTAGTTATTC
AGATTATGAACTTCTCTTGACACTGGACGATACAGTTAAACCGCCAACTG
CAAACAAGTCAACCCTCAATAAACTATCACAAGAAATGAAGAGGAACAGT
GACAGTGAATTATGTGTAATTTGCATGGGTGATATTTTGTTTCAGGAAAT
TGTTATTACTTTACCGGAATGTGGACACCGTTTTCATAAATCTTGCATAG
AAAATTGGTTACTGAATTGTTCGAAACAATGCCCTGTGGATATGACATAT
ATTTGTTAAGTAACAGGATTTTCAACACAGCCATACAGAAACCAGAACGC
TGgatcaaaagaaaataatttatcgTTGCAGAATGTCTCATCGGATGAAG
AAGAAGTTTGCTTTTGCTTCCACGAGGATGATGTCCTTGATGAATCTTTT
TTCAGTGATTTGATGtacaaaagcaagaaaaaacaattaaagTCATCGCG
ACCAAAGCGCAAGGTCAGATCAACTGTGAAACAGACATTTAGAAACAAGC
AGGAATTTTTCAAAGGGAATGATAACAACAATAAAGGTGTTGATGATGAA
GTCGAATTAACACAAGTCCTTAGAGAACTTCCTCCAAAGATCAATCTAAA
tttgaatcaaatcaaaaaggaaatttcaaaatgtcaaacaatcGAGGACA
ACCATCTTCTACACAAGAGGAATATTAAtaaaaagctaaagaaaaacaat
attttgagaTGCTCCCAGCTCCCTAAAAGTTATTCATTACCAAACCAAAG
CCGAATTTCTCAGCAAAAACTCGAATACAAGTCTGTTGAAGAGAAAATGC
TAGAACTTCAATACCGTGATATTAGTTATTCAGATTATGAACTTCTCTTG
ACACTGGACGATACAGTTAAACCGCCAACTGCAAACAAGTCAACCCTCAA
TAAACTATCACAAGAAATGAAGAGGAACAGTGACAGTGAATTATGTGTAA
TTTGCATGGGTGATATTTTGTTTCAGGAAATTGTTATTACTTTACCGGAA
TGTGGACACCGTTTTCATAAATCTTGCATAGAAAATTGGTTACTGAATTG
TTCGAAACAATGCCCTGTGGATATGACATATATTTGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000097_pilon | genome | sc0000097_pilon:1022217..1024664 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 115-945:1618 |
| Aaloc | 1-114:1 |
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