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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000227_pilon:191288..193138- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039926 ID=XLOC_039926|Name=XLOC_039926|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1851bp|location=Sequence derived from alignment at sc0000227_pilon:191288..193138- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAGAATAATTTCAATCATGTCACTTATAAAGTATGGAATAGTTTT
TTTGAGTATCGCGCTTAATTTGATGTTTATGGCCAAATTGAAACAAGGAA
ATTCGAGCAAGAGCATCGTTCATTGTCAGGAGAAAGAAGATACTATATTT
TACATTCAGAAATATATCACGGAGTTGTTGGATGTGCGAGTTACCGTGCC
CAAAAAGCACACTTTACGTCAAATTGTAGATCAACATTTTAACAACGTGC
AACAAATATTGAAGGATTTAAATTTCAAAGATTTTCCAGTTATCCATAAT
ATACGAAAAATTGAATTACCAAACAAACTACACCACTACGAAAAGATGAA
CAAAGCAACAAAGAACAGTACATCTTTTCCTTGTCTTGAAGCATATTTGG
GGTTTCCTTACGGAAACCCTTTATACAATGAAGGTTTTCGTCGAACGAAT
TGTCAAAATATATCACAAAGATTGTCACTTGTCATAGATCGACCTATCAT
AGACTCGGTTGAAAATTTCCGAAGGACATTATCATTTGCTAAAGGAAGGT
TTAAAAAGATTCATATTGTATTACAATCATCAGACTATCGTTTAGTCAAA
AGAACTATTCAGCAATGGATGCCCAACGTAGCGATTCAACTTATTAAACA
AGCTGACAATGTATCGTTGCATCTGAATAAAATTGTACAAAAGATAGATA
CTGAATATGTAGTGATAGCTTCACAAGTTGTTTTAATAAATGAGCAGTTT
GACATCATCAGAATGGTTCAAGTCTACGAAAGTCTTAAACATGTGATCGT
CGCTTCATCCATAAAGAATTACCAGTCAGGGAAATGGGAAACTGGTTGCT
ATCAAACTGCCTTGAAACCGTATAGACTAACCTACTGGTCTGGATATAGG
GAATCACAAAAAAGTTGCCTCAAATGTGACTTTGTTAAAGGAGCTTTTCT
GTTGTCTCCTCAGATACTGAAAAAAAACCCGTTTAGAGGAAGACAAATAG
ATACATTGTATGCAGATTTGTTTCTCCGTCTTCAAAAGCAAATAAAAATT
TTTACATGTCCTGATGTAATGGTGTACATTAACAGCAAGGAACGATACGA
AGCTGATGAGATAGGCGCGTTCAATATGTTATGGAACTTCGAACAAATTC
AATGGTATACATTACAAACATTTCAATTTCCATGTCCAGCCAATTTTAAA
GGATTGGTTTCCAAATGTAGGGTTGGAAAGGGTATGGCAGCTCCACCGTG
CTGTTTAGAGATGCTCTATGATGGTATGGAATTTGTCACGGATTTATTTG
ACAGATATAGAATTCAATACATGCTGATTGAAGGATCTGTTCTGGGAGCT
GTTAAGTTCAATGGGATATCGAAGTGGGAGCAAGACGCAGATATTGCAAT
CAAATCAAAAGACTTTACTAGATTGTTGTTAGTGATGGATGACTTAAACG
AAATGAATTATACGTTGGTCATTGACCAACCAGTCCAATGTTGCCATGGA
CATGTAAAATTCGGAGGAGTTGCTCATATTCGAGTCTTTCACTGGAGCAT
ACAAATATATGGATTCGATAGTTTGGGCGAGGTTGAAGGCGCTCAAACAA
ATATTGAAATGGGTAACGGAAATCGGAAATCGTCATTTAACGCCAAAGTA
GCAGAAAACCCTGGAAGGTATTCTCGCAACCGGTATGGAAGTGAAGTTTT
CCAGCATGCAGAGCACTGGATGAAAACGGGAAAGAAAGATGGTTGGCAAG
ATTATGAGAGTGGAAAATTTGAAGAGTGTTCGAAACCTGGTCATCATGCA
TGTCTCGATCAATTTGTTGCCGATGGAAGTTTTCTTCGGGGAAAAATATA
A Coding sequence (CDS) from alignment at sc0000227_pilon:191288..193138- >XLOC_039926 ID=XLOC_039926|Name=XLOC_039926|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3702bp|location=Sequence derived from alignment at sc0000227_pilon:191288..193138- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAGAATAATTTCAATCATGTCACTTATAAAGTATGGAATAGTTTT
TTTGAGTATCGCGCTTAATTTGATGTTTATGGCCAAATTGAAACAAGGAA
ATTCGAGCAAGAGCATCGTTCATTGTCAGGAGAAAGAAGATACTATATTT
TACATTCAGAAATATATCACGGAGTTGTTGGATGTGCGAGTTACCGTGCC
CAAAAAGCACACTTTACGTCAAATTGTAGATCAACATTTTAACAACGTGC
AACAAATATTGAAGGATTTAAATTTCAAAGATTTTCCAGTTATCCATAAT
ATACGAAAAATTGAATTACCAAACAAACTACACCACTACGAAAAGATGAA
CAAAGCAACAAAGAACAGTACATCTTTTCCTTGTCTTGAAGCATATTTGG
GGTTTCCTTACGGAAACCCTTTATACAATGAAGGTTTTCGTCGAACGAAT
TGTCAAAATATATCACAAAGATTGTCACTTGTCATAGATCGACCTATCAT
AGACTCGGTTGAAAATTTCCGAAGGACATTATCATTTGCTAAAGGAAGGT
TTAAAAAGATTCATATTGTATTACAATCATCAGACTATCGTTTAGTCAAA
AGAACTATTCAGCAATGGATGCCCAACGTAGCGATTCAACTTATTAAACA
AGCTGACAATGTATCGTTGCATCTGAATAAAATTGTACAAAAGATAGATA
CTGAATATGTAGTGATAGCTTCACAAGTTGTTTTAATAAATGAGCAGTTT
GACATCATCAGAATGGTTCAAGTCTACGAAAGTCTTAAACATGTGATCGT
CGCTTCATCCATAAAGAATTACCAGTCAGGGAAATGGGAAACTGGTTGCT
ATCAAACTGCCTTGAAACCGTATAGACTAACCTACTGGTCTGGATATAGG
GAATCACAAAAAAGTTGCCTCAAATGTGACTTTGTTAAAGGAGCTTTTCT
GTTGTCTCCTCAGATACTGAAAAAAAACCCGTTTAGAGGAAGACAAATAG
ATACATTGTATGCAGATTTGTTTCTCCGTCTTCAAAAGCAAATAAAAATT
TTTACATGTCCTGATGTAATGGTGTACATTAACAGCAAGGAACGATACGA
AGCTGATGAGATAGGCGCGTTCAATATGTTATGGAACTTCGAACAAATTC
AATGGTATACATTACAAACATTTCAATTTCCATGTCCAGCCAATTTTAAA
GGATTGGTTTCCAAATGTAGGGTTGGAAAGGGTATGGCAGCTCCACCGTG
CTGTTTAGAGATGCTCTATGATGGTATGGAATTTGTCACGGATTTATTTG
ACAGATATAGAATTCAATACATGCTGATTGAAGGATCTGTTCTGGGAGCT
GTTAAGTTCAATGGGATATCGAAGTGGGAGCAAGACGCAGATATTGCAAT
CAAATCAAAAGACTTTACTAGATTGTTGTTAGTGATGGATGACTTAAACG
AAATGAATTATACGTTGGTCATTGACCAACCAGTCCAATGTTGCCATGGA
CATGTAAAATTCGGAGGAGTTGCTCATATTCGAGTCTTTCACTGGAGCAT
ACAAATATATGGATTCGATAGTTTGGGCGAGGTTGAAGGCGCTCAAACAA
ATATTGAAATGGGTAACGGAAATCGGAAATCGTCATTTAACGCCAAAGTA
GCAGAAAACCCTGGAAGGTATTCTCGCAACCGGTATGGAAGTGAAGTTTT
CCAGCATGCAGAGCACTGGATGAAAACGGGAAAGAAAGATGGTTGGCAAG
ATTATGAGAGTGGAAAATTTGAAGAGTGTTCGAAACCTGGTCATCATGCA
TGTCTCGATCAATTTGTTGCCGATGGAAGTTTTCTTCGGGGAAAAATATA
AATGGCGAGAATAATTTCAATCATGTCACTTATAAAGTATGGAATAGTTT
TTTTGAGTATCGCGCTTAATTTGATGTTTATGGCCAAATTGAAACAAGGA
AATTCGAGCAAGAGCATCGTTCATTGTCAGGAGAAAGAAGATACTATATT
TTACATTCAGAAATATATCACGGAGTTGTTGGATGTGCGAGTTACCGTGC
CCAAAAAGCACACTTTACGTCAAATTGTAGATCAACATTTTAACAACGTG
CAACAAATATTGAAGGATTTAAATTTCAAAGATTTTCCAGTTATCCATAA
TATACGAAAAATTGAATTACCAAACAAACTACACCACTACGAAAAGATGA
ACAAAGCAACAAAGAACAGTACATCTTTTCCTTGTCTTGAAGCATATTTG
GGGTTTCCTTACGGAAACCCTTTATACAATGAAGGTTTTCGTCGAACGAA
TTGTCAAAATATATCACAAAGATTGTCACTTGTCATAGATCGACCTATCA
TAGACTCGGTTGAAAATTTCCGAAGGACATTATCATTTGCTAAAGGAAGG
TTTAAAAAGATTCATATTGTATTACAATCATCAGACTATCGTTTAGTCAA
AAGAACTATTCAGCAATGGATGCCCAACGTAGCGATTCAACTTATTAAAC
AAGCTGACAATGTATCGTTGCATCTGAATAAAATTGTACAAAAGATAGAT
ACTGAATATGTAGTGATAGCTTCACAAGTTGTTTTAATAAATGAGCAGTT
TGACATCATCAGAATGGTTCAAGTCTACGAAAGTCTTAAACATGTGATCG
TCGCTTCATCCATAAAGAATTACCAGTCAGGGAAATGGGAAACTGGTTGC
TATCAAACTGCCTTGAAACCGTATAGACTAACCTACTGGTCTGGATATAG
GGAATCACAAAAAAGTTGCCTCAAATGTGACTTTGTTAAAGGAGCTTTTC
TGTTGTCTCCTCAGATACTGAAAAAAAACCCGTTTAGAGGAAGACAAATA
GATACATTGTATGCAGATTTGTTTCTCCGTCTTCAAAAGCAAATAAAAAT
TTTTACATGTCCTGATGTAATGGTGTACATTAACAGCAAGGAACGATACG
AAGCTGATGAGATAGGCGCGTTCAATATGTTATGGAACTTCGAACAAATT
CAATGGTATACATTACAAACATTTCAATTTCCATGTCCAGCCAATTTTAA
AGGATTGGTTTCCAAATGTAGGGTTGGAAAGGGTATGGCAGCTCCACCGT
GCTGTTTAGAGATGCTCTATGATGGTATGGAATTTGTCACGGATTTATTT
GACAGATATAGAATTCAATACATGCTGATTGAAGGATCTGTTCTGGGAGC
TGTTAAGTTCAATGGGATATCGAAGTGGGAGCAAGACGCAGATATTGCAA
TCAAATCAAAAGACTTTACTAGATTGTTGTTAGTGATGGATGACTTAAAC
GAAATGAATTATACGTTGGTCATTGACCAACCAGTCCAATGTTGCCATGG
ACATGTAAAATTCGGAGGAGTTGCTCATATTCGAGTCTTTCACTGGAGCA
TACAAATATATGGATTCGATAGTTTGGGCGAGGTTGAAGGCGCTCAAACA
AATATTGAAATGGGTAACGGAAATCGGAAATCGTCATTTAACGCCAAAGT
AGCAGAAAACCCTGGAAGGTATTCTCGCAACCGGTATGGAAGTGAAGTTT
TCCAGCATGCAGAGCACTGGATGAAAACGGGAAAGAAAGATGGTTGGCAA
GATTATGAGAGTGGAAAATTTGAAGAGTGTTCGAAACCTGGTCATCATGC
ATGTCTCGATCAATTTGTTGCCGATGGAAGTTTTCTTCGGGGAAAAATAT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000227_pilon | genome | sc0000227_pilon:191288..193138 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1851:1852 |
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