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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000450_pilon:33641..38274- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039895 ID=XLOC_039895|Name=XLOC_039895|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4634bp|location=Sequence derived from alignment at sc0000450_pilon:33641..38274- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGTTCCAAGAATTTCTAAAGCACCAGCTTGGCACCGCAACATCATC
TCAGTGGAGAAGTTTTAACACTAAAAAATTATTTGCTTCAAAAGAATTAT
GCACTGTGTCAGTCTGCAAAAATCATGTAGCTCCTGTTACATGTCTATCT
TTAGAGAAACAGGAATTTAGATAGTAAGTAACTCATTTGAATGATGGGGT
GACACTTCTACCAGATAGATGCTACAAAAATTCATAAATCTTTTTTCACG
TCTCATTCTCTAAAGTTATTTCTTTTCTTTTTTTAGTCTACTCTCAGGAT
CAGCAAAAGGTCATATTGTCATACATGATAGAAGCCTTTTAGCTGGAAGT
AATGGATTTTCTACAATTGCAGATATAAGCTGGTATGAAAGTTTGTCCTT
TTCCCACGAATTGTACTGTTCTGGCCTTTGTGCAGTTAAATAGAGATCTT
GTAAATCCAAAAATTTCTGTCTTTATAAAAGCGTAAGGCAAAGTTCACTG
AAAGAATTTTTTCAAGTCAGGTTAATATATTTAAATTGAGGTCCGAATCA
CTGCGAAAAAGGCTGAGCTTGCAAAAACAATTTTGTTGTTAAAACGAATC
ATGAAAACAAAACAGTGTGCCTTATGTCAGTTGATTGTTCTATTCGACAA
AAGAATGTCTTGTTGCTGAAATTGCATAATGAAGACCATTAATTAAGAAC
GCTTCGACGTTAAAATGTTGAGATTTATATTTTAGGAAAAGGACTGGCGA
AAAGTGTATTCAACGATTACAATGGTATCCCTTGGACACAGGAATGTTTT
TCATGCAAACGGAAAATGAAATAAAAGTCTGGGACGCAAATCAACTTCAA
GTGGCTGAACAATTTCATTTCACGTCAAAGTTAAGTGATATGCACGGTAA
AGAAATCGGAAGAAACCCTCTCATTGCAGGTATACAAGCACTCAATGTTG
AAGTTAAAGTTATATTCAATTCTAGATTTAAAGTCCATTTTCTCAATGTC
AGTACAGTTAGTTCCCATGAGGTTGATTTCCATATGGTGGCAAAACAGAG
TGTACTGCTTGAAGCGAATGGACTTGTAAAATATTTTTAAACAGTCTTTT
GTTTTCTTTCTTATAGCAAGCAGCTTGGACAAGAGCATTTTTATTTGTGA
TTTGGCAACTGGATCAAGAACTCACACACTGACTGGTAGCAAAAAAAGAA
ATCATTTAATTCTTGCATATTATATTCTTGGTCTCAATTAAAGTTTAAAC
TCTAGCATTGCTAAAATGATGTCATTGGTAATGAGAAATTTTTCATCAAA
AGTCCCTTATTTGATAAAAAACTCAAAAATTTAATTAGCAATCAAAATTA
TTTTTTAGGTCATGACAGCCCTGTTACTGCAGTGAAATGGTCACCAAGAA
AAGAACATGTCTTATACAGCGGAAGGTTTTACTTTAAAGCTTTTATGAAG
ATTTTACCAAGTTCATATAAAAGGCCCTTTTTACAATTAATTATATTCAA
GCTTTGTTTATTTGATGGTTGTTTAGTACGAAAAATTGCAATGAATGGAT
ATCAATCAAGCATGGTTCTTTCAGGATTCAAGACTATTAAATGCAATCAA
ATTGCGGTCTTGTGACTAAGCAAACTTGACTGTAGCCTTTTTATTGCAAC
CAGTCCAATCCAATGAGTTCCATATTGAGTTTATATTTCATCTGAATGTT
CCAATCATCGCATACTTGCATTTCTTTTTAGTACAAATGGAAAAATCAAT
ATCTGGGATGTTCGAAAAACAAAGAATCTACTCAAAAGCTTGCAGACTAC
AGGTTAAAAATGAATTAAATAATTGTTTGCCGAGTTTGAAAGATACACCC
TCTGTCTATTGAAAAAAACAAAGATCATTCCAACAAGTGCAATGAGATCC
TGTAAAACACTATTTCGTACATTGATAAATCAAGACATAAATAGACTTTG
TGATTGATGAACTTATGGGAATTCTCCTTGCTTATATGAATAACATTTTT
TTTCTGGATTAATTTAGAATCCAAGAAGAATGGAGTAGATAGTATCAGTT
TCACGCCAAATGGTTTTGGATTGATTTCTCTGAATTCTGATGGAACACTT
TCTCTTTGGAAATGTCATAATGGAAAACAAGCAAAGGTGGTGTCATTATA
CCTTTTTTTACAAAGGCTTGTCTGTCTGTCTGTCTGTCTGTCTGTCTAGC
AGAGTGTAACTTAATGTTCTTGGTGTGCAATACTGTGAGTTCTTCATACT
TCTTCTTTCTGGTATCCGTCTGGCTGCCTTTCTATAAAAGGGTAAATGGC
ATCAATGATATACAACACTGTATCGAGATATTATGATTTTTCAATAGCTA
CAGTCAACTCTCACTCTCTCTAATTCGAACTTCTATTATTCGAATCTTTC
TAAAATTCGAACTAAAATTTTTGGTATTTTAAAGATCAAATTAGAGGGAG
TCTAATAATACATTTAATGAAGTTAAATTATTATTAGTTAATTATTATTT
TCAAGGTCAACTATGCAGCTTCAAGTGCCAACAATGACCGAGCAGGGTCA
ACTTGTGTTTCGAACAATAATCAGGTTGTGTTTGCCTCCAATGATCGAAA
TGTCCAAGCATATGATATTTATACTGGTGAACACATGAAAACGTTCAATG
GTCATTTCAAAGCAGTAACTGGTGTTTGTTATAACGATCCATTTGAGGTC
AGTTTTTGGACCTACCCTGGGGTGGAGGTCCTATAAATTCACCTCTGTCC
GTCCGTTCGTTACCAGCTTTTCTCGAGATTGAATCATAGGAATCATTTGA
TTTTTGGTACAAAGGTGCAAAATGCTGGTGGCCAAAATGTGACGGAGCCC
GATTTTCGGAAAAAAAAATTTTTGGGCAAATTTGGGCCAAAAAACGGCTA
AAAAAGGGTTAAATTGGATCATTAACTTTTTCCGATTTTTTGCATGGAAG
TAGGGTACCATTATAGGTAAAAGATAGCTCAAGCAGATTTTTGCAAAAAA
AAATTATTTGGCTTAAAAAACGCATGTTTATCTATAAGAATCACTATTAA
TAAGCATACATCAATGTTCTTAGTCAAATTACTCAATTTTTTTATGAGAT
AGATGTTTTTTTTTGCTCACGAGGGCTCACTTTTGAAGCATATGTGTGTT
TAGACATGAAATTTTGGTTTCTTGGCGTGTTTTTATAGAAAAACTGGCCA
AATTCGACATTTTTTTATAAGCACATTATCAATTACTTAGGTATTAGCTT
TTCTCGAGATTGGCTCTTTCATTCTTTATAATTTTTTGCATAAAGATGCA
TAACTATGAATCCTCGAATGTGACGGAGCCCGATTTTCGAAAAAAAATGT
TTTTTGGCAAATTTGGGCCAAAAAACGACTAAAAAAGGGTTTTTGGACTT
TGTGAAATATTGGATCATTGTTTTTTTCTGATTTTTTGCATGAAAGTAGG
TAAAAGATGGGTCAAGCAGACTTTTGTAAAAAAACTTTTCAGCTCAAAAA
ACGCATGTTTATCTATAAGAATCACTATTAATAAGCATACATCAATGTTC
TTAGCCAAATTACTCAATTTTTTGATGAGATAGATGTCTTTTTATGCTCA
CGAAGTCTTGAATATGAAAGAGTATTTCAAGAGCATGAAATTTTGGTTTC
TAAACGTTTTTCTTATAAGAAACAAACGACTAATTTTAATAGATCGTCAC
TATTTGTGTTCTGAAGGATTGTTTAACGTTCATGCTCACGTAGATATCAA
TTATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCACTT
GTTTCTTGATTTTCAATGGAAAGTCTTCCAGAGAATTCGCACCATGTAAT
TTTTATAAGATCTATTCAAAATACTTTCATTTCTCAACGAATTTCTTTCC
ACCACAATTTTCATACTATGTTTTTTTATTTCCTTCAGGAATTGATTACT
TGTGGCTTGGATTCAAAGGTCCTGATTTGGGATAATCGTAACTACGACAA
GGTTTGTCAATCATCACCAGGAACTTCGTTTATATCCTTGATTGTATTTT
CAAAGGCTCTGGTCCTATGATGGCAGCAAAACTATCCCATTGCTGTTTGA
ATCAAAAGTTTTCACAGCTCTTGTAATTTGTTTATTCAGAGGAATGTAAA
GAGATGGAAAAACAGCTTTTCTGATTACTCAAAGTTCAACGATCACTTGA
AAATTCTATAGGAAAAACGTTGATAAGGTTATTAAATGAAAATCCAGAAA
AGACGGCTTCTACATAATTTGACGATAAAAATGAAATTTTTTTTTTCCTT
TTTTGCCGATTACTAGTTCAATTTTTAAGAATAAGGGACAATTTTTTACC
AATGTAAAAGAAATTCTTAACGCAATGATATTAAATTAATTCTTGTAAAA
CTGTCAGAAATCGAGTAAAATCAAGATAAAACCTATTAACTCAAAATTTA
GGTTAGCTTTTCCTCTTTCCAAAAGCGAAAAGTCTAGCTTTATAACATTT
TTAGTTTTCTGACAATCTCAATCCAAACTTGTACACTTACACGTATTGTA
AAAGTATTTTTAAAAATCTTTTTCGTGTAGGTGAGATTGCAGAATGAATA
TCACCAAGATGATTGGGATGCTGTCGATGATTGA Coding sequence (CDS) from alignment at sc0000450_pilon:33641..38274- >XLOC_039895 ID=XLOC_039895|Name=XLOC_039895|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2196bp|location=Sequence derived from alignment at sc0000450_pilon:33641..38274- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGTTCCAAGAATTTCTAAAGCACCAGCTTGGCACCGCAACATCATC
TCAGTGGAGAAGTTTTAACACTAAAAAATTATTTGCTTCAAAAGAATTAT
GCACTGTGTCAGTCTGCAAAAATCATGTAGCTCCTGTTACATGTCTATCT
TTAGAGAAACAGGAATTTAGATAATGCAGTTCCAAGAATTTCTAAAGCAC
CAGCTTGGCACCGCAACATCATCTCAGTGGAGAAGTTTTAACACTAAAAA
ATTATTTGCTTCAAAAGAATTATGCACTGTGTCAGTCTGCAAAAATCATG
TAGCTCCTGTTACATGTCTATCTTTAGAGAAACAGGAATTTAGATATCTA
CTCTCAGGATCAGCAAAAGGTCATATTGTCATACATGATAGAAGCCTTTT
AGCTGGAAGTAATGGATTTTCTACAATTGCAGATATAAGCTGTCTACTCT
CAGGATCAGCAAAAGGTCATATTGTCATACATGATAGAAGCCTTTTAGCT
GGAAGTAATGGATTTTCTACAATTGCAGATATAAGCTGGAAAAGGACTGG
CGAAAAGTGTATTCAACGATTACAATGGTATCCCTTGGACACAGGAATGT
TTTTCATGCAAACGGAAAATGAAATAAAAGTCTGGGACGCAAATCAACTT
CAAGTGGCTGAACAATTTCATTTCACGTCAAAGTTAAGTGATATGCACGG
TAAAGAAATCGGAAGAAACCCTCTCATTGCAGGAAAAGGACTGGCGAAAA
GTGTATTCAACGATTACAATGGTATCCCTTGGACACAGGAATGTTTTTCA
TGCAAACGGAAAATGAAATAAAAGTCTGGGACGCAAATCAACTTCAAGTG
GCTGAACAATTTCATTTCACGTCAAAGTTAAGTGATATGCACGGTAAAGA
AATCGGAAGAAACCCTCTCATTGCAGCAAGCAGCTTGGACAAGAGCATTT
TTATTTGTGATTTGGCAACTGGATCAAGAACTCACACACTGACTGCAAGC
AGCTTGGACAAGAGCATTTTTATTTGTGATTTGGCAACTGGATCAAGAAC
TCACACACTGACTGGTCATGACAGCCCTGTTACTGCAGTGAAATGGTCAC
CAAGAAAAGAACATGTCTTATACAGCGGAAGGTCATGACAGCCCTGTTAC
TGCAGTGAAATGGTCACCAAGAAAAGAACATGTCTTATACAGCGGAAGTA
CAAATGGAAAAATCAATATCTGGGATGTTCGAAAAACAAAGAATCTACTC
AAAAGCTTGCAGACTACAGTACAAATGGAAAAATCAATATCTGGGATGTT
CGAAAAACAAAGAATCTACTCAAAAGCTTGCAGACTACAGAATCCAAGAA
GAATGGAGTAGATAGTATCAGTTTCACGCCAAATGGTTTTGGATTGATTT
CTCTGAATTCTGATGGAACACTTTCTCTTTGGAAATGTCATAATGGAAAA
CAAGCAAAGAATCCAAGAAGAATGGAGTAGATAGTATCAGTTTCACGCCA
AATGGTTTTGGATTGATTTCTCTGAATTCTGATGGAACACTTTCTCTTTG
GAAATGTCATAATGGAAAACAAGCAAAGGTCAACTATGCAGCTTCAAGTG
CCAACAATGACCGAGCAGGGTCAACTTGTGTTTCGAACAATAATCAGGTT
GTGTTTGCCTCCAATGATCGAAATGTCCAAGCATATGATATTTATACTGG
TGAACACATGAAAACGTTCAATGGTCATTTCAAAGCAGTAACTGGTGTTT
GTTATAACGATCCATTTGAGGTCAACTATGCAGCTTCAAGTGCCAACAAT
GACCGAGCAGGGTCAACTTGTGTTTCGAACAATAATCAGGTTGTGTTTGC
CTCCAATGATCGAAATGTCCAAGCATATGATATTTATACTGGTGAACACA
TGAAAACGTTCAATGGTCATTTCAAAGCAGTAACTGGTGTTTGTTATAAC
GATCCATTTGAGGAATTGATTACTTGTGGCTTGGATTCAAAGGTCCTGAT
TTGGGATAATCGTAACTACGACAAGGAATTGATTACTTGTGGCTTGGATT
CAAAGGTCCTGATTTGGGATAATCGTAACTACGACAAGGTGAGATTGCAG
AATGAATATCACCAAGATGATTGGGATGCTGTCGATGATTGAGTGAGATT
GCAGAATGAATATCACCAAGATGATTGGGATGCTGTCGATGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000450_pilon | genome | sc0000450_pilon:33641..38274 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1045-1098:55 |
| Aaloc | 982-1044:697 |
| Aaloc | 790-981:2130 |
| Aaloc | 673-789:2616 |
| Aaloc | 601-669:2903 |
| Aaloc | 535-597:3275 |
| Aaloc | 466-531:3517 |
| Aaloc | 271-462:3899 |
| Aaloc | 175-267:4348 |
| Aaloc | 1-171:4635 |
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