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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000450_pilon:56818..59392- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039888 ID=XLOC_039888|Name=XLOC_039888|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2575bp|location=Sequence derived from alignment at sc0000450_pilon:56818..59392- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTTAGCTTTGAAACTCTTGACAACCTATGTCCTTTGCTTCACTAC
CCTAACCACGTTTTTCATCGTGTATAATTTACGGAACATACCGAACAACA
ATGGAAATCTCATTCTGCAAAATATAATTTGTAATGATGACCATGGTAGA
CGCTTCTCAAAGAAAATGAGAAAGAAATTTGATTCGGCTTCATGGGGAGA
AGCTAGACCAGCAGATAAGTTTACTAATTTGAAAGACGGTAGAGATGAGG
TACCATCTTTAATCAAGCTTGCAACTCGGCTACCATCTTCAAAAGAGAAA
GAGAGCACTGAACCGGAAGGCTTAAACGAAATCATCAAAACAATCAAGAG
AGATATATTTTCGCTTATTTACAAAGATCCTAGACTACGTTACGATAAAG
AACTACAGCCAGATTTAAGTAAATTTAAAGAACCCTTTTCTTTGTTTGGT
GAAGACCAGATATTACTGCGATCCGTTTTTCGTGCGCGAGAAGGTTCAAT
CGATTTCGATAATGATCGAATTCAAAAGCAAATTTCTTTGAAAATAAAAC
GAACGGACCCGTCAAAAAAACTGATACTTTTGATGTTTAAAAGTAATGAT
TTGAACGAACATGGACTGGTAACGAATAAATGTCATCATAAAGATTGTAT
ATTCACCAATGATGTTTCAGAAGCTGAAAATGCTGACGTCATCGTTTTTA
ATGGTCCATCAAAACAAATGATAGATCACACACGAAATCGAAAGAATCAA
ATTTGGATTTATCATACTATTGAGTCGCCTGTGCATAACCTAAACTTTGA
TACACCTGTTCAAATAAATTGGACTGCTACGTACAGGTCTGATAGTACCA
TTCCAACACCATATGCTAAATTTGTCCCCTTTGAGCATATTGAACGTTTA
CCTTATGTGGCTGATAAGAATTATGCGACAGGAAAAATTAAATTAGCAGC
TTTTGTGGTTTCAAACTGTGATGCAGAAAATGGCCGATTGGATTATATTT
GGGAACTAAAAAAATTTGCGTCGGTAGATATTTACGGTGCTTGTGGTGAT
TTGAAATGCAACAGGGATGAATGTTTCGAGGTCATCAAAAAAGATTATAA
ATTTTACATGGCATTTGAGAATTCCAATTGCAGAGAATATATCACAGAGA
AATTCTTTCGCAATGCCCTACAGTAAGTAGCTCGATCATTTGCGAATTTA
GTTTACATGCCTCACTCGGAATTTTTGTATACTAACAATTTAGTACCTTG
AAGAAACCTTTTTGGGCGAGAATGCAACATAGCGAATTTAGGTTTGATGG
AGGTTAAAACAAATTTCGGCATAGATGAAAATACACATTTTCTAATAAGC
AACCCAGTTGCTAAGACTCGAGCTCTCAAATTAGCCATTTTTTCACTATC
TCGTAAAGTAAAAGCTTTTTAGATAATCTAAGCACGGCAAACGATAGCCC
TTAACCCAATAAGCATAAATATGGTATAATATCAAGTTTGGTGGTTAGAA
AATGAGCTAAGCAGCCCCAGTAGCCCTCATCCGAAAAATGGAGTTACTTA
TAAAAGTGCGTAACTGATGTATACCTTGGCATTCGTCAAAATTAAAAATC
TTCACATTGATTTGTTTCTCCCAAAAGATAAGGTTCTCACCTCCTATTTG
AGTCACTCTAACTGTCAAATGAACAAACGTGTCAAAAGGAACACTTTTAC
CCTTCTTGCCTTCTTACACCCTTTTCTCACAGAACCGGTAGAATCTTTTC
AGTCAGTGGAGTTAAAAATAACGGACTGGAAATCAATGGGGGTTGATATT
CCCATGTTTCTTATGGCTGGGGATTTTAATTCCATTGTTTTCGAGCCCGA
AAGTTCAGTGGGGATTGAAAAGATAGCACAATATATTGCAGTGAGGATTT
GCTTATCTGATTATTTTCAGCGGGGGCAAAAATTTGAGTATATTTTTCAC
TGTGGACTATATTCTAGCCAAACAATCTAGAGGGAAGGGGTTCCAGTGGG
TCTGTGAGAAGGGGGTGTCTTCTTTTAGTTGTTTCAAATCTTAACTTCAT
TAAGATTAATAAAATTTCCTTTTAGAAGGGCTTGAAGTAATTTGATTTTT
CAAATCTTTCCCAAACGTATATACTTTGCAGCCTTTACTTTGGGTGTCTG
GAATATCAGCCGAACTTATCTGAGGGGTTCCCAAACAAAACTTTCATGTT
TACCTTCTATCTTGCAGGCATGACGTCATACCAATTGTAATGGGAGCACA
TCCAGATGATTACAAACGAGTTGCTCCACCCAATAGTTTCATACATGTGG
ATGAGTTCAACTCGCCAAGACAACTCGCCGAATACATGCACATACTAGAT
AATAATGACGATTTATATAATGAATATTTTCGTTGGAAGGGTACTGGAGA
GTTCATCAATTCGAAATTTGTTTGTAGAGTCTGTGCAATGGTTCAAGCCA
CTCCTTCTTTGCCGTTCGCTTCGTATGATATCAATAAAATGCTGACGTCA
GCAAAACACCAATGTTTATCTAATGATCCTACCAATAATAAATGGTTTTC
GTGGAAAAGAAAGAAACTAAAATAG Coding sequence (CDS) from alignment at sc0000450_pilon:56818..59392- >XLOC_039888 ID=XLOC_039888|Name=XLOC_039888|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3060bp|location=Sequence derived from alignment at sc0000450_pilon:56818..59392- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTTAGCTTTGAAACTCTTGACAACCTATGTCCTTTGCTTCACTAC
CCTAACCACGTTTTTCATCGTGTATAATTTACGGAACATACCGAACAACA
ATGGAAATCTCATTCTGCAAAATATAATTTGTAATGATGACCATGGTAGA
CGCTTCTCAAAGAAAATGAGAAAGAAATTTGATTCGGCTTCATGGGGAGA
AGCTAGACCAGCAGATAAGTTTACTAATTTGAAAGACGGTAGAGATGAGG
TACCATCTTTAATCAAGCTTGCAACTCGGCTACCATCTTCAAAAGAGAAA
GAGAGCACTGAACCGGAAGGCTTAAACGAAATCATCAAAACAATCAAGAG
AGATATATTTTCGCTTATTTACAAAGATCCTAGACTACGTTACGATAAAG
AACTACAGCCAGATTTAAGTAAATTTAAAGAACCCTTTTCTTTGTTTGGT
GAAGACCAGATATTACTGCGATCCGTTTTTCGTGCGCGAGAAGGTTCAAT
CGATTTCGATAATGATCGAATTCAAAAGCAAATTTCTTTGAAAATAAAAC
GAACGGACCCGTCAAAAAAACTGATACTTTTGATGTTTAAAAGTAATGAT
TTGAACGAACATGGACTGGTAACGAATAAATGTCATCATAAAGATTGTAT
ATTCACCAATGATGTTTCAGAAGCTGAAAATGCTGACGTCATCGTTTTTA
ATGGTCCATCAAAACAAATGATAGATCACACACGAAATCGAAAGAATCAA
ATTTGGATTTATCATACTATTGAGTCGCCTGTGCATAACCTAAACTTTGA
TACACCTGTTCAAATAAATTGGACTGCTACGTACAGGTCTGATAGTACCA
TTCCAACACCATATGCTAAATTTGTCCCCTTTGAGCATATTGAACGTTTA
CCTTATGTGGCTGATAAGAATTATGCGACAGGAAAAATTAAATTAGCAGC
TTTTGTGGTTTCAAACTGTGATGCAGAAAATGGCCGATTGGATTATATTT
GGGAACTAAAAAAATTTGCGTCGGTAGATATTTACGGTGCTTGTGGTGAT
TTGAAATGCAACAGGGATGAATGTTTCGAGGTCATCAAAAAAGATTATAA
ATTTTACATGGCATTTGAGAATTCCAATTGCAGAGAATATATCACAGAGA
AATTCTTTCGCAATGCCCTACAATGAACTTAGCTTTGAAACTCTTGACAA
CCTATGTCCTTTGCTTCACTACCCTAACCACGTTTTTCATCGTGTATAAT
TTACGGAACATACCGAACAACAATGGAAATCTCATTCTGCAAAATATAAT
TTGTAATGATGACCATGGTAGACGCTTCTCAAAGAAAATGAGAAAGAAAT
TTGATTCGGCTTCATGGGGAGAAGCTAGACCAGCAGATAAGTTTACTAAT
TTGAAAGACGGTAGAGATGAGGTACCATCTTTAATCAAGCTTGCAACTCG
GCTACCATCTTCAAAAGAGAAAGAGAGCACTGAACCGGAAGGCTTAAACG
AAATCATCAAAACAATCAAGAGAGATATATTTTCGCTTATTTACAAAGAT
CCTAGACTACGTTACGATAAAGAACTACAGCCAGATTTAAGTAAATTTAA
AGAACCCTTTTCTTTGTTTGGTGAAGACCAGATATTACTGCGATCCGTTT
TTCGTGCGCGAGAAGGTTCAATCGATTTCGATAATGATCGAATTCAAAAG
CAAATTTCTTTGAAAATAAAACGAACGGACCCGTCAAAAAAACTGATACT
TTTGATGTTTAAAAGTAATGATTTGAACGAACATGGACTGGTAACGAATA
AATGTCATCATAAAGATTGTATATTCACCAATGATGTTTCAGAAGCTGAA
AATGCTGACGTCATCGTTTTTAATGGTCCATCAAAACAAATGATAGATCA
CACACGAAATCGAAAGAATCAAATTTGGATTTATCATACTATTGAGTCGC
CTGTGCATAACCTAAACTTTGATACACCTGTTCAAATAAATTGGACTGCT
ACGTACAGGTCTGATAGTACCATTCCAACACCATATGCTAAATTTGTCCC
CTTTGAGCATATTGAACGTTTACCTTATGTGGCTGATAAGAATTATGCGA
CAGGAAAAATTAAATTAGCAGCTTTTGTGGTTTCAAACTGTGATGCAGAA
AATGGCCGATTGGATTATATTTGGGAACTAAAAAAATTTGCGTCGGTAGA
TATTTACGGTGCTTGTGGTGATTTGAAATGCAACAGGGATGAATGTTTCG
AGGTCATCAAAAAAGATTATAAATTTTACATGGCATTTGAGAATTCCAAT
TGCAGAGAATATATCACAGAGAAATTCTTTCGCAATGCCCTACAGCATGA
CGTCATACCAATTGTAATGGGAGCACATCCAGATGATTACAAACGAGTTG
CTCCACCCAATAGTTTCATACATGTGGATGAGTTCAACTCGCCAAGACAA
CTCGCCGAATACATGCACATACTAGATAATAATGACGATTTATATAATGA
ATATTTTCGTTGGAAGGGTACTGGAGAGTTCATCAATTCGAAATTTGTTT
GTAGAGTCTGTGCAATGGTTCAAGCCACTCCTTCTTTGCCGTTCGCTTCG
TATGATATCAATAAAATGCTGACGTCAGCAAAACACCAATGTTTATCTAA
TGATCCTACCAATAATAAATGGTTTTCGTGGAAAAGAAAGAAACTAAAAT
AGGCATGACGTCATACCAATTGTAATGGGAGCACATCCAGATGATTACAA
ACGAGTTGCTCCACCCAATAGTTTCATACATGTGGATGAGTTCAACTCGC
CAAGACAACTCGCCGAATACATGCACATACTAGATAATAATGACGATTTA
TATAATGAATATTTTCGTTGGAAGGGTACTGGAGAGTTCATCAATTCGAA
ATTTGTTTGTAGAGTCTGTGCAATGGTTCAAGCCACTCCTTCTTTGCCGT
TCGCTTCGTATGATATCAATAAAATGCTGACGTCAGCAAAACACCAATGT
TTATCTAATGATCCTACCAATAATAAATGGTTTTCGTGGAAAAGAAAGAA
ACTAAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000450_pilon | genome | sc0000450_pilon:56818..59392 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1174-1530:358 |
| Aaloc | 1-1170:2576 |
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