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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000191_pilon:123020..125605- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039885 ID=XLOC_039885|Name=XLOC_039885|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2586bp|location=Sequence derived from alignment at sc0000191_pilon:123020..125605- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGACACAGACCAACAGGTAAAAGAACATTTTTCATTCATAATATA
TTAGGCGAAAATAAAAAAATGCAGTGTTTCCGGAATGCGGGTGAAGGAAA
AAAGCTTTCATGCGGCCGCCGGAAAAATTTTTTTGTTGCTATTTTTGATA
ACTTAAGAACAAAACTTGATTTACAAGCGGGAATATCTAACCAAACGACG
TTTGATAGCTTGAACGGTCAACTTTATTTTCTTTATAATGAACCATATAG
ATGAACCCATAGTCTGCGGCCGGGTCAGAAAATTTTTTATTTTCACCCGG
CCGGTTTCCGGAAACACTACATTTTTTTATTTTCGCCTTATGTAAAATTA
AGCTTGAATCAATCATTTTTACATGCACTGTCGCTGAAATTCCATAAGGT
GGATCCTGGCGGGTGCACCATGGTCACTAGCTGATCAAAGTTACGGCGGT
ATCTTTCAGTGAAAATATTGAGAGAATATTTGCTTAACAGACTGTAGTTA
ATTGAACAAAATTGTCACTTGATGACCTTGGTGAATCTAATCTCAGGCCC
ATATGTAAAAAGATCAAAATTTCAATCTCAAAATTTCTAGCGAAAAAGTC
CCAAAAAGGGTAACAAATTTAACAAAACTTTGGAGTTTCCCTCAATTTCA
GTCCCCTTTAAGGGTCTGGTTTAGTCCCCAGGTCCAAATTCAAAAATAAG
GGTGGCATATAAACTCGACATCCCTCAAACATATCACCCCCCGGATGAAA
ACATTCGACTTTTGTCATAAATAATTATCGTAATTTTGAAAATAAATGAA
ACTTAATTTAGAATAATTGCTTTTTAATTATCCATATTATAACTACAAAT
ACGTAGATGACAAAATAGTAGACATAAACATTTATAAACAAAAACACAGC
CACTTGGCAACGGTAGTAAAATTTAGAAAAAGTGAAAATTTGTTCAATAA
ACTTGTGGTGATTAAAAAGGTTAAGGTTGGAGATGACTTTACTCCTAAAT
ATTTGAGAGAAGAATAATTTACAACTTTTTCAGGCAGGTAAGGTATTGTG
ATTTTTTATTTTGAAAAAACTGTTTTGAATTTTTAAGATCAGACAATCGA
TCCAAACGAACTGAATTTTGAATAAATATATTACCCAAATCTTGTTCCAT
AGGGCGAGACCAATTTGATTAGTTGTTTTACGGGCCCGACCGACACTGAA
ATTCCAAAGATCAAAATAAAAATAAAATGAATTTTGGTAGTACGCTTTTA
TTTTCATTTCTTTAAAGACTCCCAAATTTTTTTATTTAAACTAAAATTTG
GTAGTTTTTCGAAGGTTTTGAGATTTTTATGTTCAATTTTTCATTATATC
TATGAATTCGAGCTTTTTGTGTATTTTTATTTTCTATTTCGCATTTTTGT
CGAGATGTAGTAGTTTTTGCTCCCTTTTTAGGAGATTTTTTAGGTAAATT
TCTACTTTTATTTTTATTTTTTCACCGACCGACCAACCCTCTATTTTTGG
TAGCTTGGCCCGTAAAACAACAAATTAAATTGACCTCGCCTAATAAAGGA
ATCAATCAAAGCAGCTAATCCATATATTAAATCCACATATTAAATATTTT
TGTGAAAACTTTGGTGATTTCGATTTTAAATAAGTATTTCAAATTTATTT
TCTTTTGATCAAATGTTACATTCCTCTAAATATATCGAGAACGGCTGAAA
AAGAGTGAATTTAAGCGAAGTACTACTGCACTATAAAATATGAGATAATT
TTAAATTGAAAATATTTGCAATGGTAAAGCAATCATTTCATCTATTTTCA
GAACAGAAAGTCATACATTTAAAAATCAACATTTTGTTCGATGTTCTCGT
TTCAAAGTAATAAATCTTTTTCGATAGTTTTTACTTGAACGTTGTTTGCC
ACCATACATTGGACATGAAATCTACTCTTGTGTGCTTAATTGTAGGGGGG
TGGAATAGGCAAGGGGTGGGTACTCCAGATAAAAATCAACATAATTAAGT
GCTATTGACCTGATTTTGCTAAAAATCCCTAGAAAAATGAAGGTTTTTGG
CCAATTTTGGCACTTTGTAGCATTAAGGCCATAAAATGGGGGGGGGGTAC
TAAAAAATGCAAGATCCCCCCCCCCCCCCTACAATCAAGCACACAAGAGT
ACAACTTTTTTTTTGGTTTTAGTCTTTGGCATCATCAGACACCAGCTCCT
CATCGACCTCATCATCAGTGAGTGAACCACCACGCAACGATATGACCGTC
ATTGGATCTTCCTACCACTATTCATTCGGGGTACCCATCCATACTGGTCC
TGACTCCATTAGGCCGTACCGACGCACACGACTCGACGCCACATACACGG
GGTTCTCTAAATCACAAACAAATGTTGGTTCCTTAGATACAGGTCACGTG
ACACATGATTCCCCGATTAACCCGTTTCCTAGAAGACGCTCCGATCGGGT
TGGTGGTATCGGATGGGGATTGAGTAAGCCGGGCGCCTATGATGCGGGAC
TGTTAAAAAGCGGACATCAGATTCAACGAAAACACTTCCGTGACCAGAAA
GAGAATGAGTTATCTCGGAGGCCACCTTTTCCTTAA Coding sequence (CDS) from alignment at sc0000191_pilon:123020..125605- >XLOC_039885 ID=XLOC_039885|Name=XLOC_039885|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=870bp|location=Sequence derived from alignment at sc0000191_pilon:123020..125605- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGGACACAGACCAACAGATGGCGGACACAGACCAACAGTCTTTGGC
ATCATCAGACACCAGCTCCTCATCGACCTCATCATCAGTGAGTGAACCAC
CACGCAACGATATGACCGTCATTGGATCTTCCTACCACTATTCATTCGGG
GTACCCATCCATACTGGTCCTGACTCCATTAGGCCGTACCGACGCACACG
ACTCGACGCCACATACACGGGGTTCTCTAAATCACAAACAAATGTTGGTT
CCTTAGATACAGGTCACGTGACACATGATTCCCCGATTAACCCGTTTCCT
AGAAGACGCTCCGATCGGGTTGGTGGTATCGGATGGGGATTGAGTAAGCC
GGGCGCCTATGATGCGGGACTGTTAAAAAGCGGACATCAGATTCAACGAA
AACACTTCCGTGACCAGAAAGAGAATGAGTTATCTCGGAGGCCACCTTTT
CCTTAATCTTTGGCATCATCAGACACCAGCTCCTCATCGACCTCATCATC
AGTGAGTGAACCACCACGCAACGATATGACCGTCATTGGATCTTCCTACC
ACTATTCATTCGGGGTACCCATCCATACTGGTCCTGACTCCATTAGGCCG
TACCGACGCACACGACTCGACGCCACATACACGGGGTTCTCTAAATCACA
AACAAATGTTGGTTCCTTAGATACAGGTCACGTGACACATGATTCCCCGA
TTAACCCGTTTCCTAGAAGACGCTCCGATCGGGTTGGTGGTATCGGATGG
GGATTGAGTAAGCCGGGCGCCTATGATGCGGGACTGTTAAAAAGCGGACA
TCAGATTCAACGAAAACACTTCCGTGACCAGAAAGAGAATGAGTTATCTC
GGAGGCCACCTTTTCCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191_pilon | genome | sc0000191_pilon:123020..125605 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 70-444:376 |
| Aaloc | 22-60:415 |
| Aaloc | 1-21:2587 |
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