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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000032_pilon:1955911..1959369- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039859 ID=XLOC_039859|Name=XLOC_039859|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3459bp|location=Sequence derived from alignment at sc0000032_pilon:1955911..1959369- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTCGTTACAAGCTTTTTCTCGGTCATCTATCACCAGATGCAAGAAC
TCGTGATGTTGAAAGATTCTTTAAAGATCATGGGTTTTCTAAATCGATTG
TAGAAGTCGTTGTGAAAACTGGATATGGCTTTGTCGTAAGTCTTTTTCTC
TGCAAATAGATAGTTTTTTTCTTCGAAAAGGTTTGCATATTCCTAATCAA
GTCCGACTTTTCTTGGGCATTTCACATGTTCTTCAATGGATATATTTTTT
GATGATCTAATCTTTAAATGAAAGGCTATTCCATTCTTAAACCAGGCAAG
GGCATCGGTAGACAGGACACCTGTCCTGTATTTTTATAATCTGACATATA
CAGGACAGGTACGAGCTGTGAGGCAGATTTCTGCCTCAAAAAACTTACAA
TGGGAAATTCGAAATAGTGCTGTCCTCTTTTACTAAAATAAAAACCATAT
CATGGATCCCTAGGCTAGGGTATCGGCAACCCTTTCCAGAGGGGGGACTG
AGCTTGGCTTTTCTAAGGGGTTTAGTCACTTATTTATTATATTCACAGGG
GATCATTGGAAGTTTGCAGGTCCTTCCAAGTGTCAACAAAGATTTAGAGG
GGCTCTTTCCTCACAAGCTGGCATAAATAGTTTCCCATAGCGGCATAGGG
TTTCACCCACAAATCTCCCACGTGCGTTTGGTTTGGGAACGCGAAACACG
AATGCGAACTACCCATGTCTAAACTTTTCAATATATCTCCAAAACTAACA
GACTTTTTGAAATTCTGTAAAAAGGTCCAAGTTCCTGAATAGTTTTACTA
TGTTCTGTGAAAAAATCATAAGGCGACCGCCTGCATGCTCTTAAGCCGCC
GCTCAAAAAAGTTCATTATTTCTTAAAAACTCATTATTTTCTTCTTTTCC
TGTGCCAAGCTATCCAAAACACTCAAAGTGAATCAAAAATAACATCTTCG
CTAACAAAATGTGCGCCTCGAGTAAGAAATATGGTTCCAATCACGTCCGC
GAATGGGGTGGGGATTTTTTTAAGCAGTGGGCGGCATCAAGGGCGTTTTA
GAAATTCGCGTTTTAGACGCGTCTCGAACGCGTTTGAATTTTGCGCGTAT
GTTATTTTGATTTCGAAAGTGAAAGCAGCTCGATTTCACGGTGGAATTCA
ACTTCGTTGGAGATTGGAAGCACCAGTTAGGAATAATGAATAATGAAATT
TTGCCGCATCAAATATTTTTTGAAACGCGACGGTAAACAGAACATCAAAT
TCCCATCGCCTAACCATCAGTCAAATACGCGTTCATCTATTTAAAGATTG
AAGACAAAAATTGCGAAGAAAAATAAACCTTGAGCACAAAAAATGCTTTT
TAAACACTTTTTTCCACCGAAAAACAAATAACTTTTATAGACTTACCTTC
CCCAAACATTGAAGAAGCCTCTGCTAATCAAAGTAAATGAGATAAGATAA
GATAAAACCTTAAAATCAACCAGAATTTACAACATTTCGTTCAAAGCAAA
AGACATGCTTTTCTCGCCGCCATCTTGTTTTAGAATGAGAATTATTTTCG
GTTCCAGTTCCCACGGTCTTTTTTTCATCCAATCAGATCGCGCGATTTCA
CTTTCGCTTTCTCTAGTCCAATAAGACTGCGGGATTTGAGTCATGTGACA
TCTCTATTGAAAAACCCTCGCGGAATAAAATAGAAATACAGGGGGTCACA
CTACTGGCTACAGGAACTGAAAGCAAACAATTTTAAGGCCAATATTTTTG
GTTTTTCTGAAGGACAAAAGGTATAGGAAGCTTTACTGAAAGAGGGATAA
GGCTGGGGCTATCTATTTAAAAGAAATGGACAAAAAAAGGCACTATTTTG
GGTGATAATTAAGATTTTACTTAGAAACTTTAATTCTCTTACCCCCGTCT
CGGGCCCCCCTGATATGAGCAGGTGAACCATGTTGGCCACCCCTACTGAA
AATTTCAGATCAAAACAAACAATGAATTAATTCCTGTAACTCGATGAAAA
TTGGAAAAAGCTGGTTTTGATTGTTTCTGATCTTTTTGGTAAAAGCTATG
CAATTTATGTTTGGATTTCTAGAAAGCCTACCCATTCATTGTCAATATAT
TTTTTATTTGAAAGTAATTTGTTGTTCAAAAGTGGATTAGCAGCAGATTA
CTTTTGATTATTAAATCCCGATTAGTACAGTACCACTGGTGTTAAAAAAT
TAGGCATGAATCTGGATCAATTTCCGATTAAATAAAAAGGCAAAATTTTA
ATCCTGCTCTGACCCAGGATTAGCTCAGGATTTAATCTAATCAACTTTTG
AACAACCAAGCAGAACCAAGCCAAGAGGATAATTTTCGGTTCAAAATTTC
CAGGGGTTGGTAAAAACTTTGTCAATACCCTCTGTTTAATTTGTTTTTGG
AATTAGCCCAATGAAACACAAATAAAGAATTACTACTAAGCGAGTTACTT
TGATTTTGAGTCCATCTTGCAGTTAACAATATAAAGTCCCTCTCCAAAAA
TCAAATTTCTGAAATTTTCTTTTAGATTTTTGACGACAGAAGAGATGCAG
ATGATGCAATCTATGAATTAAATGGAAAGGAGTTACTTGGCGGAAGGTAT
TATATTCAAGCAAGTTCCCCTTGGAAGCCAAAAAAGCTCTTTTTATGCTT
TTTTTTTATCATGAAAAAGGCTCATTTTACAATTATTCTTTAAACTTTAG
AAAGGCACTGTCTGATGACCAGACCCTGAAAGTGTCATGAAAAGTGATTT
GACAGTTTTTTCATATTTGGTACTGTTTTGGTGTAACTATTCATTCTCTT
TCAGACTTCAAGTTGAATTCGCAAAGCCGTCTGGGAGATTCGAAGACAGA
GATGGCGGTGGTCGTGGACGTGGTGGAGGCTATGGTGGTAGTGGTGGTGG
TGGGGGTGGGGGTTACAGATCAGATAGAGATCGAGGCGGACGTGGTGGTG
GTGGCGGCTGGCGGTGGAGGGTGAGTTATAATTTCATTATTGGACACACA
TGCCATTGTTTACAAAGATATCTTACCATTGACCAGTTCTGGCTCTGGAC
AGTTTAACATTCAATGTGGTATCGCTGTCATCCATTTTATGATGAATTTA
TTCAAATACTTTCCTTTACAGCTATGGTCGTCCATACAACACAGAATACC
GAATTATTGTTGAAAATCTATCAACTAGAGCAAGTTGGCAGGTAAAATTT
ATCTGTATGATTTTTATATCAAGGATATTAATTTTCATTGGCTTTAACTG
ACCACTAAAATAGAAATTGCTTTGTTCTGTTTTTAAAAGTTTTAGCTTGA
GAAATTATTAAAAAGATTTACCTTTTTTAAGAAATTTTAAGGTTGTTAAA
TTTTATACCAACTAGACATACTCCTTGCTTTCACTAGATTTTTGAATACT
ATTAATTTTAATTTTCAATCCTGGATTCCCTTTTCTAGCATTTGTTGTTG
TGCACTTAA Coding sequence (CDS) from alignment at sc0000032_pilon:1955911..1959369- >XLOC_039859 ID=XLOC_039859|Name=XLOC_039859|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=926bp|location=Sequence derived from alignment at sc0000032_pilon:1955911..1959369- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTCGTTACAAGCTTTTTCTCGGTCATCTATCACCAGATGCAAGAAC
TCGTGATGTTGAAAGATTCTTTAAAGATCATGGGTTTTCTAAATCGATTG
TAGAAGTCGTTGTGAAAACTGGATATGGCTTTGTCATGAGTCGTTACAAG
CTTTTTCTCGGTCATCTATCACCAGATGCAAGAACTCGTGATGTTGAAAG
ATTCTTTAAAGATCATGGGTTTTCTAAATCGATTGTAGAAGTCGTTGTGA
AAACTGGATATGGCTTTGTCATTTTTGACGACAGAAGAGATGCAGATGAT
GCAATCTATGAATTAAATGGAAAGGAGTTACTTGGCGGAAGATTTTTGAC
GACAGAAGAGATGCAGATGATGCAATCTATGAATTAAATGGAAAGGAGTT
ACTTGGCGGAAGACTTCAAGTTGAATTCGCAAAGCCGTCTGGGAGATTCG
AAGACAGAGATGGCGGTGGTCGTGGACGTGGTGGAGGCTATGGTGGTAGT
GGTGGTGGTGGGGGTGGGGGTTACAGATCAGATAGAGATCGAGGCGGACG
TGGTGGTGGTGGCGGCTGGCGGTGGAGGACTTCAAGTTGAATTCGCAAAG
CCGTCTGGGAGATTCGAAGACAGAGATGGCGGTGGTCGTGGACGTGGTGG
AGGCTATGGTGGTAGTGGTGGTGGTGGGGGTGGGGGTTACAGATCAGATA
GAGATCGAGGCGGACGTGGTGGTGGTGGCGGCTGGCGGTGGAGGCTATGG
TCGTCCATACAACACAGAATACCGAATTATTGTTGAAAATCTATCAACTA
GAGCAAGTTGGCAGCTATGGTCGTCCATACAACACAGAATACCGAATTAT
TGTTGAAAATCTATCAACTAGAGCAAGTTGGCAGCATTTGTTGTTGTGCA
CTTAACATTTGTTGTTGTGCACTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000032_pilon | genome | sc0000032_pilon:1955911..1959369 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 445-465:22 |
| Aaloc | 376-444:338 |
| Aaloc | 364-372:501 |
| Aaloc | 208-360:655 |
| Aaloc | 136-204:935 |
| Aaloc | 1-135:3460 |
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