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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000409_pilon:175668..176954+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039819 ID=XLOC_039819|Name=XLOC_039819|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1287bp|location=Sequence derived from alignment at sc0000409_pilon:175668..176954+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTACTAAGCTATCAccgaaaaatgttctttatgtaTCAAGTGACGA
GTATGTGAAAATATGTGATTTACACCCTAAAGTAAGGGGACGAGCCAAGC
TAGTTGATTGTCTTATAGAAGTTTATGGGCTGAACGAGAAAATGAAGATA
AACTTTCCAGAAAGAGCTTGCAAAGAAGAACTTGAGTCATTTCATACTTC
TGAATATGTAACATGCTTGGAATCAATCGAAAGTTACTTCAAGGAAAATG
GAAATTTCAATTCAAAGAGAGAGGAAAAGatttgcctcgattattcaGAA
CTTATGGATGAAGTTGAGTGTGACATCATTGCTCATGGTTTTGGTTACGA
TTGTGAAATATTTCCAGACATGTTGCAATATGCAAAAATTGTTTCAGGTG
CCACATTAACTGCTGCGAATTCGCTGATGAGGAAAGAGAGCAACATTGCC
ATCAATTTGGGAGGTGGTTGGCATCACGCACATGTCGACGAAGCTGCTGG
GTTTTGTTATGTTAATGATATTGTAATTGGAATTTTACATCTATTGAAGT
CATTTAAAAGAATTCTGTATATTGATTTTGATGTACATCATGGTGATGGC
GTTGAAGAAGCTTTTCAGTTTTCCAATAAAGTTTTCACACTTTCTTTACA
TAAATACGCACATGGATTCTTCCCTGGTACCGGGGATATTGTGGACGTGG
GTAAAGGATCAGGAACTAACTTTACATGTAATATTCCTTTGAAGAATGGA
ATAAGAGATGAAAACTATGAGTCTGTGTTCTGCAAGGTCTTTGATGCAGT
TATTCGTCATTTTGACCCTCATTTGATAGTTTCTCAATGTGGAGCTGACA
TGCTAAATGGTGACCCACTAGGAGGCTTCAATTTGACTGAGAACTGTCTT
CCTCGCTGTTTTAAAAAGATTCAAGCAATAGGTCTTCCTTTACTTGTCCT
TGGCGGGGGAGGCTATCACTTGCCAAACACTGCGCGTTGCTGGTTGAAAC
TGATAGCAAGCTTACTGGATGTGGATGTGGACGATAATATACCTGAACAT
GAACACCTAGAAAAATACGGACCAGATTTTTCGTTAGAAATTTCGCCAAG
CAATCGTAAGGATGAAAACACTATTGAATACCTGAACAGTATGCTTGAAG
ACGTActggaaaatctttctttctccTCTGCGGATACAGAAGAAAACAAC
AAGGAAAACACTAACGCCAATGTGGAGGTGATTGACCAAGAAGGTTGTGA
ATCAGAACCTGtgtcaaagaaaaacaaaatttgttag Coding sequence (CDS) from alignment at sc0000409_pilon:175668..176954+ >XLOC_039819 ID=XLOC_039819|Name=XLOC_039819|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2574bp|location=Sequence derived from alignment at sc0000409_pilon:175668..176954+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTACTAAGCTATCAccgaaaaatgttctttatgtaTCAAGTGACGA
GTATGTGAAAATATGTGATTTACACCCTAAAGTAAGGGGACGAGCCAAGC
TAGTTGATTGTCTTATAGAAGTTTATGGGCTGAACGAGAAAATGAAGATA
AACTTTCCAGAAAGAGCTTGCAAAGAAGAACTTGAGTCATTTCATACTTC
TGAATATGTAACATGCTTGGAATCAATCGAAAGTTACTTCAAGGAAAATG
GAAATTTCAATTCAAAGAGAGAGGAAAAGatttgcctcgattattcaGAA
CTTATGGATGAAGTTGAGTGTGACATCATTGCTCATGGTTTTGGTTACGA
TTGTGAAATATTTCCAGACATGTTGCAATATGCAAAAATTGTTTCAGGTG
CCACATTAACTGCTGCGAATTCGCTGATGAGGAAAGAGAGCAACATTGCC
ATCAATTTGGGAGGTGGTTGGCATCACGCACATGTCGACGAAGCTGCTGG
GTTTTGTTATGTTAATGATATTGTAATTGGAATTTTACATCTATTGAAGT
CATTTAAAAGAATTCTGTATATTGATTTTGATGTACATCATGGTGATGGC
GTTGAAGAAGCTTTTCAGTTTTCCAATAAAGTTTTCACACTTTCTTTACA
TAAATACGCACATGGATTCTTCCCTGGTACCGGGGATATTGTGGACGTGG
GTAAAGGATCAGGAACTAACTTTACATGTAATATTCCTTTGAAGAATGGA
ATAAGAGATGAAAACTATGAGTCTGTGTTCTGCAAGGTCTTTGATGCAGT
TATTCGTCATTTTGACCCTCATTTGATAGTTTCTCAATGTGGAGCTGACA
TGCTAAATGGTGACCCACTAGGAGGCTTCAATTTGACTGAGAACTGTCTT
CCTCGCTGTTTTAAAAAGATTCAAGCAATAGGTCTTCCTTTACTTGTCCT
TGGCGGGGGAGGCTATCACTTGCCAAACACTGCGCGTTGCTGGTTGAAAC
TGATAGCAAGCTTACTGGATGTGGATGTGGACGATAATATACCTGAACAT
GAACACCTAGAAAAATACGGACCAGATTTTTCGTTAGAAATTTCGCCAAG
CAATCGTAAGGATGAAAACACTATTGAATACCTGAACAGTATGCTTGAAG
ACGTActggaaaatctttctttctccTCTGCGGATACAGAAGAAAACAAC
AAGGAAAACACTAACGCCAATGTGGAGGTGATTGACCAAGAAGGTTGTGA
ATCAGAACCTGtgtcaaagaaaaacaaaatttgttagATGAGTACTAAGC
TATCAccgaaaaatgttctttatgtaTCAAGTGACGAGTATGTGAAAATA
TGTGATTTACACCCTAAAGTAAGGGGACGAGCCAAGCTAGTTGATTGTCT
TATAGAAGTTTATGGGCTGAACGAGAAAATGAAGATAAACTTTCCAGAAA
GAGCTTGCAAAGAAGAACTTGAGTCATTTCATACTTCTGAATATGTAACA
TGCTTGGAATCAATCGAAAGTTACTTCAAGGAAAATGGAAATTTCAATTC
AAAGAGAGAGGAAAAGatttgcctcgattattcaGAACTTATGGATGAAG
TTGAGTGTGACATCATTGCTCATGGTTTTGGTTACGATTGTGAAATATTT
CCAGACATGTTGCAATATGCAAAAATTGTTTCAGGTGCCACATTAACTGC
TGCGAATTCGCTGATGAGGAAAGAGAGCAACATTGCCATCAATTTGGGAG
GTGGTTGGCATCACGCACATGTCGACGAAGCTGCTGGGTTTTGTTATGTT
AATGATATTGTAATTGGAATTTTACATCTATTGAAGTCATTTAAAAGAAT
TCTGTATATTGATTTTGATGTACATCATGGTGATGGCGTTGAAGAAGCTT
TTCAGTTTTCCAATAAAGTTTTCACACTTTCTTTACATAAATACGCACAT
GGATTCTTCCCTGGTACCGGGGATATTGTGGACGTGGGTAAAGGATCAGG
AACTAACTTTACATGTAATATTCCTTTGAAGAATGGAATAAGAGATGAAA
ACTATGAGTCTGTGTTCTGCAAGGTCTTTGATGCAGTTATTCGTCATTTT
GACCCTCATTTGATAGTTTCTCAATGTGGAGCTGACATGCTAAATGGTGA
CCCACTAGGAGGCTTCAATTTGACTGAGAACTGTCTTCCTCGCTGTTTTA
AAAAGATTCAAGCAATAGGTCTTCCTTTACTTGTCCTTGGCGGGGGAGGC
TATCACTTGCCAAACACTGCGCGTTGCTGGTTGAAACTGATAGCAAGCTT
ACTGGATGTGGATGTGGACGATAATATACCTGAACATGAACACCTAGAAA
AATACGGACCAGATTTTTCGTTAGAAATTTCGCCAAGCAATCGTAAGGAT
GAAAACACTATTGAATACCTGAACAGTATGCTTGAAGACGTActggaaaa
tctttctttctccTCTGCGGATACAGAAGAAAACAACAAGGAAAACACTA
ACGCCAATGTGGAGGTGATTGACCAAGAAGGTTGTGAATCAGAACCTGtg
tcaaagaaaaacaaaatttgttag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000409_pilon | genome | sc0000409_pilon:175668..176954 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1287:1 |
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