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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000409_pilon:112453..116830+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039817 ID=XLOC_039817|Name=XLOC_039817|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4378bp|location=Sequence derived from alignment at sc0000409_pilon:112453..116830+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTAAGTCAGCTGAACAGACTTTAGAAGTTTACTTTCAATACAAAAGTAG
GCGACAACACTGTTTAagctttaaaaactttttctgtaACAATCTGTTTT
TATTATCCACATTAAATCGAGTTTTAAATTATAAAGCCTTTAGGATATTT
AATTTGCTTAGAGGGTCATTAATGAGTATTTGTAATATGGTTCCGGATTC
GATAGTCTGCAAGaagattttcacatttttacgCATAGAGACatgattga
taaaaaattctgaCCTATAatattttctgagaaaaaaaaccaAAGTACAA
ATCTAGTGTAATTGAAGTTGTTCTTATTGCATCTATTGAAACGTTTCATT
TGATCATTGATGGTTAAACTACCTTCTAAAAACGTGTGAAAACCACTTCT
TTCTATGATACATTTCTTATTTagacagaaaaaatgttttcgagGGACAA
AAGTGAGCGAGAAGTATCGATgacattttactttttacaaaacacATTTC
ATCGCTTCATTGTTACGTAAAAGTCGCAAAAATattgttaagaatttctt
ttaatttcgGAATGATTTCAGTGCAAGCGAAAATCATACGAAAAAATCAC
CACCGCCCAAACTAAAATTCAGAGAAATATTTGAATCGTATTGTGTATTG
TTTCAAattaataatattctaacatcGTTATGTTGTTTAGACGTTCCGGC
ACGAGCGAGCACAGATCTTTCATCAACACATTCGATCAGCGCACATCAAC
AAGCTACCACCATTGGTTTGTTACACGGCAACGACCACTTATTTGAACAA
CATAGAGGAGGAGGCACGTGTTCGGTGTACGGAGGAATGACAATGCCTGA
ACGATCGGTTGAAAGCCCTATCGACAGTCAAAACATGAAACCTGGAAGTA
AGTTACTTTTTGTTCAAAGTTAACATATCTATAACATTCTAAAGCTACAG
CATGTAGAAAGGCCCAACTAAGTTGTCATTAACCTTTTGGAGCAATGTGC
ATAGAAAGTCTCGATGTTTTAATGAAGATCATGTCCAAAGACTAAGTTAC
ATTACATTCATAAGACACTATCCTTATCTTATTATCAATCTCTTAATTGG
TTAGAGGATCATCGAAGCTTTCATTAAAACTAACCATTTTATGGACTAAA
TAAAGGGAAGAGGAAGAGGGTCAGGAAActaacaaaaTcttttaaaaatg
aattgatATATAAAATACGTCATTTGCGTTAATCTTGTCAAATTCATGAA
ACAGGGGCCGATAAATGCACTCGCTTTTCACTCGACGTTCTATATCACTC
TTCTCGATCATTtcttaattaaaaacaaaaacaaaagactgATTTAGTAG
CAGAGAATGAGAAATATTTATGTCATTGGTTTCCCGCCGATGTGAGGCGC
CTGACACAACCTGTCGCTCGCTGTACTAAGTCCCTTCGGATAAACAGTCC
AGTAATAAAAAGAGAGCGTCATTTAAAACAACATTGGATGACTTTTTGCG
TACACACAGTTCGTCTTTCTCTTCTCTCCGTTACTTTAAGACGTTTCGAa
ctaacaacaacaacatcaaaagTTCATATGCGCCTATTATGAAGGAATAG
ACTAAGGACCAAAATTAACCTCCAAAGCTTAGGACCCTTTTTTATcttta
tataatatttaaatAAGTTTACAGATAACAAACGACGAAAGGCATTCTGA
ATGTTAGCACAGTGTATAGTTGTTTACACAAGCAAGTGATTAACCGCAAA
AACCATCGAGTAAACAGTGGCTCGTGCAAAGTCTTTTGTTCTCTTATGTa
acgttttttttcaaagggcTTCATCAAAAAATGACCTGAGGCTTAGCAGA
TAGAGGAAGAGGCCCTCCGGCCCTCCTCAATCTAAGCTCTTTTAAGACCA
TAATGATTGCTTATCTATGGGACGGCAAATAGATATGAATGAATCACTTA
TGATTTATTACTCTTGATCGACAAATTGAGATGTATCAAATTACTTGGCA
CAAGAAAGCATTGTTACAAAATATCCTCAGTACCCCAATTTCAATGCTAA
AGCGAAAGACAGGAAGGGTAAAAACGAGattttattatatccatttttaa
tgtttttctaaagccattttttcttttatcaaaacattaaaaaattgttC
ACACATCTTTAAAGATTTAGCGCATCATATTTATTACAATATTGTACTTT
CTTTTACCCTTCCTCAAGGCCGGAAGCTGTGCCTGTGACGttttttttGT
TCGATCTCAAGAAATTGAATAGCTTAGAGGTATGAAGTTTGAATTGAACC
TGTCAAAAAATAAACAGAGTGGCaatatatatacaaaaaaacaaatgagT
TAGCATTAAGAGGGATTATTACTGCACTGTATCGATGCTGACCTTTTTCA
ATGTGAAGTGATTAGCATGCTAGATCTACGAGGATTTGGGATAATTCTTT
CAGATTATAACATGGAGATTAAGAAGATTTTCTCGTCCTCGCTGCCTGCC
TCACACCAACTTTCCTTAATCTTGACATGTTATCAACAGAAACAgtcaat
aaaaatcttttttctacttttaacaaaattaatCCTGTTAATTGGGTATT
GATCCCATTCCAAAATCACACTTTAAAAGAAATTAAGAAGAAATTCATCG
TCAATGGACAAAACTAAACGTGCATTTCCAAAAAGTCCTGGCAAAAATCA
GAGTGGAAAATACATCAACAGTTTTTACTCCAATTATAGAAAATGAGAGG
CGCAAGTCATTGATGCTTTTTAAAGTACCTCCACACCACACTATCAATAT
CATAAATCAAAACGAGCACAAAGTGTAATATTTCTAACGGTCTCTTGATT
AATGGTCATTTAATTATCCTTAAGTCATTAGAACGTTGTCAAAAATAATg
acctttaaaaagaaaaatattgaagatttcTTGTTGGTAGTACTGcacca
attttgaaattgaagaacTTTCATTTTGTAATCGCGTAGGTTTTTCTTCA
TAACATCAAATTTTAATCGGTCATCAACATCAGGGTCAATAAACAAATCA
TAAATTGCTGAATAGAAGATCGAAAGCACAATCAGAGGAGATAAGATAGG
TTAGGTAGGAAAGAAAAGACATCTAGAAGGACGGAGAGAGATAACGAAGA
AAGGAAAAATCTAATTGAAATATATAGAGCGCCGAATACAAGAATAATTA
CCTAATTACCAATCAAAAACTATTGATGACAACAAACAAAAGCATACAAC
AAGAGGGCGGCATTATTAAAGcatacaaaaatacaggaaatTGTATGTGT
TTTCGAACTGACAAAGAAATAAGTAGGGGTTAAATTCTTTACTTAAATAC
ACAACACCTTACTGTGGTTAATGAGCACTATTCAGTGACGGGTAGTCAGT
GATTTTGTAAAGACATACTCTTGACAGTGTATTTAATTCAAGATGGTTGT
CCTTTCAGCACCACCCAAGAGACGTCGTGAACGAACTACCTTCACTAAAG
CACAACTCGATGTATTAGAAGATCTCTTTGGCAAAACAATGTACCCTGAT
GTTTTCATGAGAGAAGAAGTTGCCaaaaaaaTCAGTCTGGCTGAAGCTCG
AGTACAGGTAAATTCCAATTGATTTGTTTAGTAATGAATGTTTATGACTT
GAATAATACTACAAACTACTACAAACTACAAACAGATTGAGTAAATGTAT
TGCCATATGATTGGTCTAGCGCAACCGTTAACATAGGGTTTAttattgat
tttctgattaaTATAGAAGGATATAGAATTTGGAATCGTTACCTTcatta
tttctaaaattttcgatttcgttTGCTTACAGGTCTGGTTCAAAAACAGA
CGTGCCAAATTTCGTCGGTCACGAGAAAGCCCAGGACGACACTTCGATCA
CACCAAATTCTTACAACGTGATAAATTTTTACAAGACGATTTGGTTCGTT
CATTCAAATCAGGACCAAGCAGTTTCTTACCACCATATCAATATCAAAAC
CCGTTATGGAAATACCCACCACCTGCAACAGAGCACAGCCCAACATACGG
TACGTCACAGGTAGTAGACGATTCTTTTTATAGACAATCAACGAACGGTT
ATAACTCAGTTTCGCCTTACACCGACTACCCTTCGTCTTACTCCACTTCA
CCACGTCAACAATATTTCTCCACACAATACTACAGTCCACCCGGTGGTAA
CCATGACTACAACTCATGCGCACCAAGCACCACTACATCGAACACTGTAC
CTAGTATGTCCTTTTCACCTCACGAAAACACAACGAAAACAGATCTCAAT
TTACCGAACACTTTTCAATGGAGCGGCAGTGGTGGCACTCCGCAATACGG
AATGACAGCCGGTGGATCAAACATATAA Coding sequence (CDS) from alignment at sc0000409_pilon:112453..116830+ >XLOC_039817 ID=XLOC_039817|Name=XLOC_039817|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000409_pilon:112453..116830+ (Clytia hemisphaerica_ch_hm2_pilon)
TGTAAGTCAGCTGAACAGACTTTAGAAGTTTACTTTCAATACAAAATGTA
AGTCAGCTGAACAGACTTTAGAAGTTTACTTTCAATACAAAAACGTTCCG
GCACGAGCGAGCACAGATCTTTCATCAACACATTCGATCAGCGCACATCA
ACAAGCTACCACCATTGGTTTGTTACACGGCAACGACCACTTATTTGAAC
AACATAGAGGAGGAGGCACGTGTTCGGTGTACGGAGGAATGACAATGCCT
GAACGATCGGTTGAAAGCCCTATCGACAGTCAAAACATGAAACCTGGAAA
CGTTCCGGCACGAGCGAGCACAGATCTTTCATCAACACATTCGATCAGCG
CACATCAACAAGCTACCACCATTGGTTTGTTACACGGCAACGACCACTTA
TTTGAACAACATAGAGGAGGAGGCACGTGTTCGGTGTACGGAGGAATGAC
AATGCCTGAACGATCGGTTGAAAGCCCTATCGACAGTCAAAACATGAAAC
CTGGAACACCACCCAAGAGACGTCGTGAACGAACTACCTTCACTAAAGCA
CAACTCGATGTATTAGAAGATCTCTTTGGCAAAACAATGTACCCTGATGT
TTTCATGAGAGAAGAAGTTGCCaaaaaaaTCAGTCTGGCTGAAGCTCGAG
TACAGCACCACCCAAGAGACGTCGTGAACGAACTACCTTCACTAAAGCAC
AACTCGATGTATTAGAAGATCTCTTTGGCAAAACAATGTACCCTGATGTT
TTCATGAGAGAAGAAGTTGCCaaaaaaaTCAGTCTGGCTGAAGCTCGAGT
ACAGGTCTGGTTCAAAAACAGACGTGCCAAATTTCGTCGGTCACGAGAAA
GCCCAGGACGACACTTCGATCACACCAAATTCTTACAACGTGATAAATTT
TTACAAGACGATTTGGTTCGTTCATTCAAATCAGGACCAAGCAGTTTCTT
ACCACCATATCAATATCAAAACCCGTTATGGAAATACCCACCACCTGCAA
CAGAGCACAGCCCAACATACGGTACGTCACAGGTAGTAGACGATTCTTTT
TATAGACAATCAACGAACGGTTATAACTCAGTTTCGCCTTACACCGACTA
CCCTTCGTCTTACTCCACTTCACCACGTCAACAATATTTCTCCACACAAT
ACTACAGTCCACCCGGTGGTAACCATGACTACAACTCATGCGCACCAAGC
ACCACTACATCGAACACTGTACCTAGTATGTCCTTTTCACCTCACGAAAA
CACAACGAAAACAGATCTCAATTTACCGAACACTTTTCAATGGAGCGGCA
GTGGTGGCACTCCGCAATACGGAATGACAGCCGGTGGATCAAACATATAA
GTCTGGTTCAAAAACAGACGTGCCAAATTTCGTCGGTCACGAGAAAGCCC
AGGACGACACTTCGATCACACCAAATTCTTACAACGTGATAAATTTTTAC
AAGACGATTTGGTTCGTTCATTCAAATCAGGACCAAGCAGTTTCTTACCA
CCATATCAATATCAAAACCCGTTATGGAAATACCCACCACCTGCAACAGA
GCACAGCCCAACATACGGTACGTCACAGGTAGTAGACGATTCTTTTTATA
GACAATCAACGAACGGTTATAACTCAGTTTCGCCTTACACCGACTACCCT
TCGTCTTACTCCACTTCACCACGTCAACAATATTTCTCCACACAATACTA
CAGTCCACCCGGTGGTAACCATGACTACAACTCATGCGCACCAAGCACCA
CTACATCGAACACTGTACCTAGTATGTCCTTTTCACCTCACGAAAACACA
ACGAAAACAGATCTCAATTTACCGAACACTTTTCAATGGAGCGGCAGTGG
TGGCACTCCGCAATACGGAATGACAGCCGGTGGATCAAACATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000409_pilon | genome | sc0000409_pilon:112453..116830 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 403-948:3833 |
| Aaloc | 256-402:3461 |
| Aaloc | 49-252:693 |
| Aaloc | 1-45:1 |
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