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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000409_pilon:154224..159525+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039816 ID=XLOC_039816|Name=XLOC_039816|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5302bp|location=Sequence derived from alignment at sc0000409_pilon:154224..159525+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCAATCAAGGGAACTCAGTAGCTATGAAAAGCAACGGCTCCAAAA
CATTGAAGATAACAAGAAAATGCTTGAAAGTCTTGGATTACTTAGAAGtg
taagtttcttttttgtgttcatataAAGATATTTCCTAAATAGCAAATCA
ATAATCATAGTttgacaattttatttttgaaaaatgtttttttctctttc
atgaAGAAATAGCACTTCCCTAATGTGATGGCATAGATTATTATGTGTTA
TTGTACAagtaaaagtgtgataactgatttatcgtcaacttgaaaaatat
catcaaatttttttctcagtatTTGTGTCTTTTTTCCAACACCTGTACCA
GCtggttcaaaaaaaaaacttccgaAAATTGAAAACGTTTTTAGAGCTAT
CTTCTAAATGATCTGTATGTAATGTATCTGTAAGGTTTACCTTGCTTTAT
TAAAATTGGGGAGGGTCTGACTTTAATTTGgtgtatttactttttacatt
tagACAATCGGTTTaaaagttatgatcacttaaagtcaaaaataaaacac
ttttcaaaaactgcaaaaataagtcaaaaaggggtgataaaatttgttcg
atttgCTTTctccttctttcttttcttttgtttcaatcgAACGTATATGC
ATTTTTacgatgtacacgtttttttttttaagaaactagttttactaGAG
ACTAGAAGTCTCAATGTtgcttaagaaatcggccttttgagccttaaatg
tttcttacatgtttctaaactttttgacataatcagcctatttttcatgc
aaagattggaaggttctaaaaaaaccgttttaaaaatgttattttctcat
tctcagcctcaccatgtttcttagatgtttcttagtttttaggcattctg
agcctcatgtttcttaaaagtgtgtttcttaaaaaaaaaaaagacgtgta
gttAACTATATCCTGTTGGGTAAAAGTCACCAGAAGGTATTTAAATgtaa
aattaagaatttaaatttttatctgGTAAAACTTGACGAAAAGAAATGTC
AATATGGAATAAGGCGTGAGACTGTGAGTAAAAATCTCCATCTCTTCATC
AAAATACCTTGTGCTACGAAAAGGACCAGAGGGTGTGGGTTTGTCTTCCG
TTTGTCTTGATTATATCAATTATCAGTTAATAATGCTTTCCCAACGAATA
AGATTTCTGTTTATAGCCTTGTGaatattttcttcataaaaaagaaaaaa
attaaaaatgcaatGCAATGCAATATTAAGACATGTCTATTTCAGTTCCG
TCTCTTTCTCGTTGTAAATTTTAAGCACCCAtttttcggcttttttcgct
tcgctcattttttaaaagtgaaatcctattttgaaaactgattactcaaa
aactactgaaccaaatttaaaaaattaacagCTCAGAATCTAAGTTAGAC
CTTCTTATGGCATTAAATTCAAGCTCGTATCTTAATCCATTCTGCTAAAA
GGCATTGCCAGATACCCGGTATTTtggtgaaatcaacatcaaaacatgaG
AAACATTCCAATGGTCATTAACTTTTGTGTTTATTTAAGCTAATTTAGGA
GGACAAAGGAAACATTTCCGAGAATAAGAATTATTTCTGAGAGAAAATAT
TACAGAATATGAACTTGGTCTCACTTTTTTAAAGCTAAAGTATATGATAT
ATGGGAAATATTGACTCtctttagccaatcagattttttaaatatttttc
acattAACAATAATGAGAATATCTAAAGGAATGATTGCTAATTTTAGAGA
TTTTCCGAAATTGAACTAACACATAGACGCTCTAtttttttACCTAGTTC
AAGCCTATTTTGAATCCCCTGGTTAGAAAGAAACCAACTGAAAGAAAAAC
CAGAACAGCTCCACCAGTAAAGAGAAAGATAGCTGATGTTGTTGACCATG
AAGAAACAAGTAGTGGGGCGAAATTCATGAGACGAAGATCACTCAGAGTT
AAAGGCATTGTGAGTCGTAATCTTGTTTATTAATAACCTATTATATAATA
ACGAGTAGGATAAAATTTATCTTGAACCCCACTCCATTGCACACTAGAAA
CAAGAAGGTTTCTCTTCAACTTTGGCATtgttaaaactatttaaaatacC
TAGGGTGCTCATAATgtattgtgaatatttttgggTGAAATTAAACATTT
ACTTTTCAGTAGAAAATCTCTACGAAATcgttcaaaagattttttcagcc
cTCAACAGTTTAGTTTGCTTACTGTAAAAATGATTTAGCACATTAGAATC
TTGAAAACAGGTATTATTTAGACAATATTATATTTGGATGTTATAATTCT
GCATTTTTTCAGAAGAAAATGTTTCCAAAGATTGTATGATCACCAAAAAT
gtaaaacgttaaaaaaagCAATGACAACTGTTTTCTTGATCCAAAACATT
TCGAAAGTAATACCAACATACTTCCTATCTCTAATGGAGGCAAAATAGAG
TGATGTAAAAACATAGCTTTATGGTAGGCATGGTCGCAATCGCAACATAg
taaaacaatttattttctgTTTAGGAACCAGATGGAACCATCGTTTTAcc
agaagaagatgaagaagaataCAAGCCAAAACCGAAACCAATGCacagag
aaaattattttggtgcACCAGATACAGCTTTTCACATTGGATATCATTGG
GAAACTAGAATGGGATGCAGTGCTGATGGAATTCACAGGTAGGAGTCGAG
GATGTCTCATCTTGAAGCAGTAACAGATAATTAAAATGTAttggttatct
tttttttttcatgtaaCAGACAAATTAAACTTTCCAAGAAAATCTGTATT
GTTGATTCATTGGCTGCAACCAGTTTGAGATATTCCGTCTCCTTTACTTA
TGTTGTTATATATCAATGTACCACAAAAAGCTTTGTATTTTAACTTCTTC
CTCCACTTTGAAGGAGGTAGATCTTGAAAGGGTCATAATAAAAAATTGCG
AGTGCTATTAGTTAAATAGAACGATACGGGACGTTCATAGATGTTTAGTT
TATGTTCTAGGAACGGGAGAGAAGGTCGTTCCCTTTATTTACGTTTAGTT
TAGGAGCATCTTAGAACATTCAGGAACCTCTTAGGTATTGGAACGTTCGG
GATTATATTTCAAATCGCTTGTGAtgtcactttttaattttagtcAAAAA
TTAGGCTCAAAGgaatttgaaagcaaaattattgaaagttttaaaggaAT
GGAGAGAGATAATCCAAGAAAACTGACTAAATAATGAGTAATGAAGCGAA
TTTCATGTTTCTCCTTAGGCCAACAATAGCTGGTATACATGGTAATGAAG
CAATAGGATGTTACTCGATTGCACTTTCCGGTGGGTACGAAGACGATTTG
GATTACGGTGAAAGTTTCACATTCACGGGATCAGGTACGTCAATACTATG
CAACCAACCTTTGTGTTGAATCATCAGATTCCCATATTTAGTAAATTTAT
GTAAAGGTGGTGCAAAGAAAAATGGTCTGATTGAATTAAGTTTGATCATC
CCTTGTGGTTTTAGCAAGGCATCGTACGTGTATTTTACTCAAATTGAAGT
TATTTCTGAATTATGTACTGGACTAGGTTTCATTaaagaaaggaaatttt
ttgtcTGACAAAGACTAATTTTCTTATAACTCAAGGTAcaattttcttat
ttacttTAGGTGGGAGAGATCTAAAAGGAACTAAAAGCAACCCGAAGGTA
AGAAAACGAAAATTTCTTCATACTTTTTAAGCACATAATCGACTTCCTTC
TATCATCCAAAAAGCAATCTCGATAAGCTATTAGTATTATAAGATTTATC
AACGTGAATAATTTTTCCTGAGGATATAAAATGagaagttttcttttctt
tagaaTTTGAGAACTGCACCGCAGTCGAAAGATCAAACGTTGGATAAAAG
TGagttaaactttttctttagtttttgaCAGAAAGTCGAACGAAGAAATT
GGCTCAACTTTTATCAGTTCATCTTAAATAAGTAAAATAAATGTTAGCTT
GCTCTAATTCTTTCAAAGTCGTAAACATGTGTCTCGAAGTATAAAGTATC
TCTAGGTGTgttaaacaaaatcaaaatcatacaTTTATGTACAGTAAAAT
ACTCGATATAGCTAATAGGTCGTCTTCTTTCATGTAGTGAATTTGGCGCT
TTCAAGAAACGTGGAAAGCCGTGAGCCAGTACGCGTGATACGTGGGTACA
AATTACAAAGTCCGTTCGCTCCTGAATACGGATACAGATACGATGGTAAC
AAGACTTTTATTTCGgagattttttgtgtttttactATGGTATAGTAAGC
CAAGCCTGTAGTTTGCAAGAACAACCGTGCTTCTACGTGTAGCCCCAGTC
GTGACCTTAAAAGATTATATACTTGTTGCATTTCAGGACTTTACACAGTA
GAGAAATGTTGGCCATGTACTGGTTTGAGTGGTTTTCGTGTTTACAAATA
TGTTTTGAAGCGTGTTCAGGATCAACCACCTCCCCCGTGGAAAGAAGTAG
AGGTCATTGGTGGCAGTTCTAGTGATAAGGTAAATATACACAAATTTTGT
CTAACAAACAAAAGTGATTGCTATCTGCCAATAATCTCCGTATTACCTTG
AAATGCAAATCCCCTTCAAGTGGCCGCACTCTCAGACTGTCACCtctgtt
ttttctttatttcccTTGCTAGGAGAATGAAGACCCGTGTTTGATAGACG
AAAACGGAAACATTATATCAAAGAAGAATATGAAATTGATGGTGGAAAAT
TCAACATTGGAAAATGAAGGAACGGTCAACGAGGTAATATATTCATTGAA
ACTTCTTCTGATTTTTAAATAGATTGATCTTGTATTGATCAATTTGATTA
ACTATCCGAAGGTTGGGGAGGGTAACACTTATTTAACACTAACACACTTA
TTATCATTTCCTTAAATTTGACAAGAGTGTATGGTACATTAGTAGAAGTA
GTTCAATAAAAACAGTAGTGTAATAATAACGATGCTGTACTTTAGTTTCT
GATGTCTTCCTTTTTCTTTACATGACTTTGGATGACCACGGAACTGATGC
ATTCTTTGTCTagggtttttctttattttgaacaaatagaaataacattt
gCGGTGCACCCCTTATACCAATTGCACGGAGATAAAATTCGACCATTTAC
ATTGATTTTAGTGCGAGTATTACTATATTTATGATTATGTTTTAGGATTT
TGACGACGAAAAGAAGAAAGCGGCTGAACCGAAGAGTGAAAACGAAGAGT
AA Coding sequence (CDS) from alignment at sc0000409_pilon:154224..159525+ >XLOC_039816 ID=XLOC_039816|Name=XLOC_039816|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2088bp|location=Sequence derived from alignment at sc0000409_pilon:154224..159525+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTCAATCAAGGGAACTCAGTAGCTATGAAAAGCAACGGCTCCAAAA
CATTGAAGATAACAAGAAAATGCTTGAAAGTCTTGGATTACTTAGAAGtA
TGGTTCAATCAAGGGAACTCAGTAGCTATGAAAAGCAACGGCTCCAAAAC
ATTGAAGATAACAAGAAAATGCTTGAAAGTCTTGGATTACTTAGAAGtTT
CAAGCCTATTTTGAATCCCCTGGTTAGAAAGAAACCAACTGAAAGAAAAA
CCAGAACAGCTCCACCAGTAAAGAGAAAGATAGCTGATGTTGTTGACCAT
GAAGAAACAAGTAGTGGGGCGAAATTCATGAGACGAAGATCACTCAGAGT
TAAAGGCATTTTCAAGCCTATTTTGAATCCCCTGGTTAGAAAGAAACCAA
CTGAAAGAAAAACCAGAACAGCTCCACCAGTAAAGAGAAAGATAGCTGAT
GTTGTTGACCATGAAGAAACAAGTAGTGGGGCGAAATTCATGAGACGAAG
ATCACTCAGAGTTAAAGGCATTGAACCAGATGGAACCATCGTTTTAccag
aagaagatgaagaagaataCAAGCCAAAACCGAAACCAATGCacagagaa
aattattttggtgcACCAGATACAGCTTTTCACATTGGATATCATTGGGA
AACTAGAATGGGATGCAGTGCTGATGGAATTCACAGGAACCAGATGGAAC
CATCGTTTTAccagaagaagatgaagaagaataCAAGCCAAAACCGAAAC
CAATGCacagagaaaattattttggtgcACCAGATACAGCTTTTCACATT
GGATATCATTGGGAAACTAGAATGGGATGCAGTGCTGATGGAATTCACAG
GCCAACAATAGCTGGTATACATGGTAATGAAGCAATAGGATGTTACTCGA
TTGCACTTTCCGGTGGGTACGAAGACGATTTGGATTACGGTGAAAGTTTC
ACATTCACGGGATCAGGCCAACAATAGCTGGTATACATGGTAATGAAGCA
ATAGGATGTTACTCGATTGCACTTTCCGGTGGGTACGAAGACGATTTGGA
TTACGGTGAAAGTTTCACATTCACGGGATCAGGTGGGAGAGATCTAAAAG
GAACTAAAAGCAACCCGAAGGTGGGAGAGATCTAAAAGGAACTAAAAGCA
ACCCGAAGaaTTTGAGAACTGCACCGCAGTCGAAAGATCAAACGTTGGAT
AAAAaaTTTGAGAACTGCACCGCAGTCGAAAGATCAAACGTTGGATAAAA
TGAATTTGGCGCTTTCAAGAAACGTGGAAAGCCGTGAGCCAGTACGCGTG
ATACGTGGGTACAAATTACAAAGTCCGTTCGCTCCTGAATACGGATACAG
ATACGATGTGAATTTGGCGCTTTCAAGAAACGTGGAAAGCCGTGAGCCAG
TACGCGTGATACGTGGGTACAAATTACAAAGTCCGTTCGCTCCTGAATAC
GGATACAGATACGATGGACTTTACACAGTAGAGAAATGTTGGCCATGTAC
TGGTTTGAGTGGTTTTCGTGTTTACAAATATGTTTTGAAGCGTGTTCAGG
ATCAACCACCTCCCCCGTGGAAAGAAGTAGAGGTCATTGGTGGCAGTTCT
AGTGATAAGGACTTTACACAGTAGAGAAATGTTGGCCATGTACTGGTTTG
AGTGGTTTTCGTGTTTACAAATATGTTTTGAAGCGTGTTCAGGATCAACC
ACCTCCCCCGTGGAAAGAAGTAGAGGTCATTGGTGGCAGTTCTAGTGATA
AGGAGAATGAAGACCCGTGTTTGATAGACGAAAACGGAAACATTATATCA
AAGAAGAATATGAAATTGATGGTGGAAAATTCAACATTGGAAAATGAAGG
AACGGTCAACGAGGAGAATGAAGACCCGTGTTTGATAGACGAAAACGGAA
ACATTATATCAAAGAAGAATATGAAATTGATGGTGGAAAATTCAACATTG
GAAAATGAAGGAACGGTCAACGAGGATTTTGACGACGAAAAGAAGAAAGC
GGCTGAACCGAAGAGTGAAAACGAAGAGTAAGATTTTGACGACGAAAAGA
AGAAAGCGGCTGAACCGAAGAGTGAAAACGAAGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000409_pilon | genome | sc0000409_pilon:154224..159525 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 988-1044:5246 |
| Aaloc | 877-987:4723 |
| Aaloc | 736-876:4439 |
| Aaloc | 628-732:4190 |
| Aaloc | 580-624:3904 |
| Aaloc | 544-579:3712 |
| Aaloc | 427-540:3320 |
| Aaloc | 262-423:2575 |
| Aaloc | 100-261:1848 |
| Aaloc | 1-99:1 |
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