|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000409_pilon:133049..137014- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_039811 ID=XLOC_039811|Name=XLOC_039811|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3966bp|location=Sequence derived from alignment at sc0000409_pilon:133049..137014- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGACTCACCTAAAAGGGTATGTATTCTTTGATACACTATTAACCC
TAATAATGGCAAGGGGCGTTGTACAACTTTTAAGCCTCTTAGAAAAACTT
GCCAGTTGTTGCACACTAGGTCAGGTTTTGTTACTTCATTGTAAGTGCAT
GTCAATAAATGCAAATAAATGGTGTAAAACTGCAAAATCTTAAAGTATCT
ATAATTTTTAAAACCTTTCGTTTCGACAGGATTTATAAATAATATAAATT
AATGATTAATGATTAAAAAAATCTTCAAATATGACGAAATTTTACTTTTG
ATCTGTAAATAATATACTAATTTTTGCTTTTATTTTTTAATGGTTTTTCT
TCTTGATTACTTCATTAGGAAATTAAACAAGGTCGAAGAGCTGGAAATTT
GTTTCAAACAGCAGGCTCAAATGCATCAACGAATGAAAGTAACAACAATG
CAAGTAAAACAGAGGTAAGTGAAGTTTTCTCAAAAACTCTACAATCCCAC
GGGAGCCACAAATAATCAATTTAATGCTCAGAAGTAGGAACAAATTTTGA
CTAAATTTGATTGACCAAATCTGATAGATAACAGGAACTTTTTGTTTGAA
TCAGAAAATGTTGCTTCGAAAATTGATAAATGAAGGTTGATTAATCACAT
TCGCTGATTTAGCTTTTTATTAGCACTAGACAGTTGTTTTTTTTAAACTC
TGTATTATGTTTTATTTATCACATTGCTCTGACATTGAACTTGTCAATTT
TTTATCATTATTCAGTTTGTTAATTTCGCCTTAGCGAAAGACACAGTTTT
TTTTTCAGCCAGGCGGGGTAAAAATAACGGACTGAAATCGATGGGAATTG
ATATTCCCATACGTATTTTTTATGGCTGAGAGTTTAACTTCTTTTGTTTT
CAAGTCAAAGAATTCATTGGGAATGGGGAAAATAGTACAATCTTTTGCAT
GTGGATTGGTTTATTTGATTATTTTCAGTAGGGATAACAATTGGAGGATT
ATTTCTCATACCACCAGGGATATGATAATTTGGCCGATTTTTCCAATGGG
AAGGGTTCCCAGTGGGTCTGTGAGAAGGAGGTGTTTAATTTATGTCCAAA
AACTCTCAATCTTTCCCTTGTAGTAGTAGATCTTGAATCAGCTTTCATCT
CTGAAACTACTTGTTTTTCTCATGCAGTTTGAATATTAGGCAAAATTTTC
GACTTAAAGTCGTCTTGTTTGGTTTATTTGTAAATCCTCATCTATTAGTT
AAAATCAGCCCAAACACAAATTTAACACTCTTTCCGAAAACAATTTTTCT
TGAAATTTTTAGGCATCTTCATCACTGTCACCGAGGCCAGCACGAAAACA
GGGAGGATGGGCAGATGATATAAAAGAAAAGAAAAGAGGGTAATTAAGTT
AATTTTTTTATTGTTCTTTTTAGCATGGCAGCAAGAAAATAAGCGAAGCG
ATAAATAACGTGATTGCTTTTATTTTTATGTTTTTTTATTTCTATATCGC
AAATCAAAAATAAAAGATTTTATTCCAGACATGCTATTCCAGCGGGGGGT
GCCCCAACAAAAAAACCGATTTCTGCTAACTTTTGGAATCTTTCTTTATC
CAATTGACTTGAAATTTTTCAAGTGTGCACCAAATATGAATTGTCATCTT
TGGTGAAAATTTTAGCATCGCTGATGACGTCATTGCCACTTGATGACGTC
TTCATTTTTTGATAAGCGAAAAAGGACCCCCTCTAACTTTTTTCCACTTT
AATATTTTATGCTCAAATTTTGAGGCGACTCCACGTGACATTTATTTTTG
GGACACATGGTCAATTTCTTTCCACCTGCGGGTATGGTGTATTTTACAGA
CCGGTCCAAAATTGCCCTTTTTGCCTAAATCAGCCCTAGGATACATGTCT
AGTCTTCATGTCATGTCTAGTGATTGGAAGATGCTGTTTAATCCTGTTTG
GAACAGGGATTGATAATAAACTAGTTGTTAACATAAAAGTATCATAAAAG
AGGGTTAAAAATGTTTATTTTTTAGTGATGAAGGCAGTGATAACGAGCAA
GATGATGAAGGGTAATCAAAATTAAACATAAACCACTAAATTTTAAATAT
ATTCGATAAAATTGTTTAAGTAAACTTAACTCCAGACACCAGCATAAAAA
TTAAAACCATAGTCAGAGTTGTTTTGTTTTGTTTTCATCTCTTAACAAAT
ATCTCTACTACCAGTGAAGCTTCTAGCAAGGATAAAAAGTTTGTTGCTCT
CTTCTTCACCACTCGTGATTATCTTTTCAACGGTTGATTAAGGTATTTGT
TAAAAAAAGACAGGCAAACCTTAAATTATTGCACACCTATCGTGATTTGA
ATAGTCAAATATACTACAATAATTAATATCTAATGATGGTTTAGAATAAA
TTGAATAACTTAGGAGAATTTATAAGCATTTTAAATTAAAGATTTTAATC
CCTTAAAAACGTTATTCTCGCTAAAGACCTTGGTAATGGTTTGGGAAACT
AAGACATATTTTATTTACTATGAATTTTATTTTGTAGGAAATTTGGAAGA
ATGTTGGAAGAAGAAGAGTAAGTTTTTAGTTTAATCAATAGATCCATGTA
GAAAACGCTCCTGTAAATCCATGCTTTCATCTCCGAATTCCCCTCTGTCA
CAATTTAAGGGACCATTCTACTTATCATCACTAAAGTTCATTCGCTTGCT
TGCCCTTCCTCAAACAATGCTTCGATCGTAAAACAAGAATTAGTGCACAC
TGAATATAAGATATATCAAAGTGAATACACGATGCTGACTAAAACCTTCA
GAACTCAAAGATATACCATGAAGGTAAGCTACTAAACTGATGAAAAATAT
TTTACACCTAAAGTAGTACATTAAAAAAGTCGGTAGAAGAATGTAGGATG
TTTTTTCTGAGTTTTTTTACTGAGTTTTTCTTTATCCACACATCTAGCGA
GCGATTGAAACAAGATGCGACAGTAGTTTTGGACAATGACGGTGATGACA
TTCCAATCATCCCTGAACTTGATGACGTCACTGAAGATGACATGGCTTCA
CAAGTCGCTGCACCTCCGAGGTTTGCGTAATGCGTGCACTTCGTTCAAGG
TCGTATTGAATACAGTAGAGTCTCTCGAACCTCAACTCAAATGTCTCTTT
AACTCAAACAAGTTTCGCCATCCCCTCTTTTAACAAAGCCTTATAGACCA
ATCTCCATTACTCGAAGTCTCCTTAACTCGAACAAAAATTTGTGTTCCCT
TGTTATTGAGACTCCACTGTATCAAAGAACGTTCAGAATCGACAATCTCC
ATTTCGTAACCAACACCGATATTAAAATCACCTATCTTTGTCTGATTAAA
TGTTTCGTATAGGAAAGCTTTCTCTTCCTATACTATAAATTAAATTCCAG
TGAAATTTAGTTTTCCAATGAATTACTTCCAAATTGTTTTATATAGTGTG
CTGGTCACAAGGATTGCAACCTACAAAGAACTTGATCATGATTTCGAAAA
ACATACAGGACTTTTGACATTGGTATGTAGTTGCTTATTGTAAATCAAGT
AAAAGTTCGTTATTATCTTTGGAGATCAAGAAATGTATCAAGGGATGAAG
TCATATTATATTCTTTACTTTGGAGCCTTGATAATTAGATGTTGCTCTTG
ATGCTGCATGTTATACTTTTCCATATGCATTTATGAATATTGATTGAAAT
TTTAGGACGGTGATATTGATCTCAAATTATTGGGAAATGTTCTTGCACCA
GAATCTGAAATACAAGAGGTAACTTACAATTCTTCGATTATTTTTTTTTT
CAATAGAACAGAAGAGGGAAAGAGGTGAGAGGTCTTTCATTTAATTTCTT
CCCGTCTTTAGGCTGACAAGTCATGGAATTGGGATCGTGTTTTTACTGAG
GTATCATCCGAATTGCGTTCTGAATGGGAACAAACCAAATCACTAACATC
CAGCAACAAAGATTAA Coding sequence (CDS) from alignment at sc0000409_pilon:133049..137014- >XLOC_039811 ID=XLOC_039811|Name=XLOC_039811|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1254bp|location=Sequence derived from alignment at sc0000409_pilon:133049..137014- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGACTCACCTAAAAGGATGGAAGACTCACCTAAAAGGGAAATTAA
ACAAGGTCGAAGAGCTGGAAATTTGTTTCAAACAGCAGGCTCAAATGCAT
CAACGAATGAAAGTAACAACAATGCAAGTAAAACAGAGGAAATTAAACAA
GGTCGAAGAGCTGGAAATTTGTTTCAAACAGCAGGCTCAAATGCATCAAC
GAATGAAAGTAACAACAATGCAAGTAAAACAGAGGCATCTTCATCACTGT
CACCGAGGCCAGCACGAAAACAGGGAGGATGGGCAGATGATATAAAAGAA
AAGAAAAGAGGGCATCTTCATCACTGTCACCGAGGCCAGCACGAAAACAG
GGAGGATGGGCAGATGATATAAAAGAAAAGAAAAGAGGTGATGAAGGCAG
TGATAACGAGCAAGATGATGAAGGTGATGAAGGCAGTGATAACGAGCAAG
ATGATGAAGGGAAATTTGGAAGAATGTTGGAAGAAGAAGAGAAATTTGGA
AGAATGTTGGAAGAAGAAGACGAGCGATTGAAACAAGATGCGACAGTAGT
TTTGGACAATGACGGTGATGACATTCCAATCATCCCTGAACTTGATGACG
TCACTGAAGATGACATGGCTTCACAAGTCGCTGCACCTCCGAGCGAGCGA
TTGAAACAAGATGCGACAGTAGTTTTGGACAATGACGGTGATGACATTCC
AATCATCCCTGAACTTGATGACGTCACTGAAGATGACATGGCTTCACAAG
TCGCTGCACCTCCGAGTGTGCTGGTCACAAGGATTGCAACCTACAAAGAA
CTTGATCATGATTTCGAAAAACATACAGGACTTTTGACATTGTGTGCTGG
TCACAAGGATTGCAACCTACAAAGAACTTGATCATGATTTCGAAAAACAT
ACAGGACTTTTGACATTGGACGGTGATATTGATCTCAAATTATTGGGAAA
TGTTCTTGCACCAGAATCTGAAATACAAGAGGACGGTGATATTGATCTCA
AATTATTGGGAAATGTTCTTGCACCAGAATCTGAAATACAAGAGGCTGAC
AAGTCATGGAATTGGGATCGTGTTTTTACTGAGGTATCATCCGAATTGCG
TTCTGAATGGGAACAAACCAAATCACTAACATCCAGCAACAAAGATTAAG
CTGACAAGTCATGGAATTGGGATCGTGTTTTTACTGAGGTATCATCCGAA
TTGCGTTCTGAATGGGAACAAACCAAATCACTAACATCCAGCAACAAAGA
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000409_pilon | genome | sc0000409_pilon:133049..137014 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 523-627:106 |
| Aaloc | 460-522:262 |
| Aaloc | 385-459:520 |
| Aaloc | 262-381:1019 |
| Aaloc | 232-258:1429 |
| Aaloc | 196-228:1941 |
| Aaloc | 118-192:2655 |
| Aaloc | 22-117:3599 |
| Aaloc | 1-21:3967 |
|
